EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000022162 (Gene tree)
Gene ID: -
Gene Symbol: snrpc
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 1240 bases
Position: chrKN461814.1:70436-71675
Accession: ZDB-GENE-020419-26
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000027464	zf-U1	PF06220.12	1.2e-20	1	1
ENSPMGP00000027468	zf-U1	PF06220.12	8.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000029263	-	426	-	ENSPMGP00000027468	141 (aa)	-	-
ENSPMGT00000029259	-	420	-	ENSPMGP00000027464	139 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000022162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000022162's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000022162	snrpc	100	96.552	ENSAPOG00000013907	snrpc	98	96.552	Acanthochromis_polyacanthus
ENSPMGG00000022162	snrpc	100	95.775	ENSACIG00000010867	snrpc	100	95.775	Amphilophus_citrinellus
ENSPMGG00000022162	snrpc	100	96.552	ENSAOCG00000021151	snrpc	98	96.552	Amphiprion_ocellaris
ENSPMGG00000022162	snrpc	100	96.552	ENSAPEG00000023221	snrpc	98	96.552	Amphiprion_percula
ENSPMGG00000022162	snrpc	100	96.552	ENSATEG00000025133	snrpc	98	96.552	Anabas_testudineus
ENSPMGG00000022162	snrpc	100	57.143	ENSANAG00000021444	-	58	47.826	Aotus_nancymaae
ENSPMGG00000022162	snrpc	100	63.804	ENSANAG00000019157	-	98	60.897	Aotus_nancymaae
ENSPMGG00000022162	snrpc	100	66.443	ENSANAG00000019726	-	90	68.027	Aotus_nancymaae
ENSPMGG00000022162	snrpc	100	65.000	ENSANAG00000007843	-	98	64.744	Aotus_nancymaae
ENSPMGG00000022162	snrpc	100	61.250	ENSANAG00000020588	-	53	59.341	Aotus_nancymaae
ENSPMGG00000022162	snrpc	100	65.385	ENSANAG00000021026	-	98	59.184	Aotus_nancymaae
ENSPMGG00000022162	snrpc	100	95.205	ENSACLG00000000843	snrpc	98	95.205	Astatotilapia_calliptera
ENSPMGG00000022162	snrpc	99	76.027	ENSAMXG00000032641	snrpc	99	77.241	Astyanax_mexicanus
ENSPMGG00000022162	snrpc	100	63.750	ENSCJAG00000043055	-	98	63.462	Callithrix_jacchus
ENSPMGG00000022162	snrpc	100	55.975	ENSCAFG00000025525	-	98	55.128	Canis_familiaris
ENSPMGG00000022162	snrpc	99	54.878	ENSCAFG00000031775	-	58	61.957	Canis_familiaris
ENSPMGG00000022162	snrpc	99	54.878	ENSCAFG00020017383	-	58	61.957	Canis_lupus_dingo
ENSPMGG00000022162	snrpc	100	57.051	ENSCAFG00020009944	-	91	52.201	Canis_lupus_dingo
ENSPMGG00000022162	snrpc	100	65.101	ENSCHIG00000005039	-	98	58.389	Capra_hircus
ENSPMGG00000022162	snrpc	50	86.111	ENSTSYG00000029745	-	67	55.639	Carlito_syrichta
ENSPMGG00000022162	snrpc	100	57.534	ENSTSYG00000025721	-	98	54.167	Carlito_syrichta
ENSPMGG00000022162	snrpc	100	61.268	ENSCCAG00000028293	-	98	57.746	Cebus_capucinus
ENSPMGG00000022162	snrpc	100	61.538	ENSCCAG00000036059	-	87	60.897	Cebus_capucinus
ENSPMGG00000022162	snrpc	100	58.750	ENSCCAG00000022751	-	97	58.491	Cebus_capucinus
ENSPMGG00000022162	snrpc	99	64.331	ENSCHOG00000011439	SNRPC	88	63.694	Choloepus_hoffmanni
ENSPMGG00000022162	snrpc	50	67.143	ENSCGRG00001021483	-	99	58.042	Cricetulus_griseus_chok1gshd
ENSPMGG00000022162	snrpc	100	95.890	ENSCSEG00000016845	snrpc	98	95.890	Cynoglossus_semilaevis
ENSPMGG00000022162	snrpc	100	96.528	ENSCVAG00000014297	snrpc	98	96.528	Cyprinodon_variegatus
ENSPMGG00000022162	snrpc	100	68.153	ENSDARG00000009871	snrpc	99	70.064	Danio_rerio
ENSPMGG00000022162	snrpc	65	67.778	ENSDNOG00000042403	-	51	98.305	Dasypus_novemcinctus
ENSPMGG00000022162	snrpc	50	88.732	ENSDORG00000029823	-	86	67.797	Dipodomys_ordii
ENSPMGG00000022162	snrpc	100	68.000	ENSDORG00000005955	Snrpc	65	64.667	Dipodomys_ordii
ENSPMGG00000022162	snrpc	65	67.778	ENSETEG00000008756	-	58	96.610	Echinops_telfairi
ENSPMGG00000022162	snrpc	50	88.732	ENSETEG00000008268	-	99	56.494	Echinops_telfairi
ENSPMGG00000022162	snrpc	98	58.065	ENSETEG00000011265	-	99	53.896	Echinops_telfairi
ENSPMGG00000022162	snrpc	99	64.331	ENSEEUG00000014633	SNRPC	90	63.694	Erinaceus_europaeus
ENSPMGG00000022162	snrpc	100	77.215	ENSELUG00000020489	snrpc	99	49.697	Esox_lucius
ENSPMGG00000022162	snrpc	100	75.159	ENSELUG00000000815	SNRPC	59	67.391	Esox_lucius
ENSPMGG00000022162	snrpc	73	97.143	ENSFHEG00000016667	snrpc	94	97.143	Fundulus_heteroclitus
ENSPMGG00000022162	snrpc	100	95.833	ENSGMOG00000000090	snrpc	99	95.833	Gadus_morhua
ENSPMGG00000022162	snrpc	100	96.528	ENSGAFG00000016115	snrpc	98	96.528	Gambusia_affinis
ENSPMGG00000022162	snrpc	100	96.552	ENSGACG00000004899	snrpc	97	96.552	Gasterosteus_aculeatus
ENSPMGG00000022162	snrpc	100	95.205	ENSHBUG00000011637	snrpc	98	95.205	Haplochromis_burtoni
ENSPMGG00000022162	snrpc	99	54.658	ENSHGLG00000017741	-	99	65.101	Heterocephalus_glaber_female
ENSPMGG00000022162	snrpc	100	61.875	ENSHGLG00100017764	-	99	61.146	Heterocephalus_glaber_male
ENSPMGG00000022162	snrpc	99	54.658	ENSHGLG00100010786	-	99	65.101	Heterocephalus_glaber_male
ENSPMGG00000022162	snrpc	100	79.167	ENSHCOG00000001596	snrpc	99	83.448	Hippocampus_comes
ENSPMGG00000022162	snrpc	100	78.981	ENSIPUG00000024851	snrpc	99	70.701	Ictalurus_punctatus
ENSPMGG00000022162	snrpc	100	95.862	ENSKMAG00000016356	snrpc	98	95.862	Kryptolebias_marmoratus
ENSPMGG00000022162	snrpc	100	95.890	ENSLBEG00000023881	snrpc	98	95.890	Labrus_bergylta
ENSPMGG00000022162	snrpc	99	59.355	ENSMMUG00000045425	-	99	60.510	Macaca_mulatta
ENSPMGG00000022162	snrpc	100	65.772	ENSMMUG00000039415	-	98	67.347	Macaca_mulatta
ENSPMGG00000022162	snrpc	99	57.241	ENSMLEG00000039724	-	81	45.395	Mandrillus_leucophaeus
ENSPMGG00000022162	snrpc	99	59.873	ENSMLEG00000040224	-	53	60.215	Mandrillus_leucophaeus
ENSPMGG00000022162	snrpc	100	95.862	ENSMAMG00000003857	snrpc	98	95.862	Mastacembelus_armatus
ENSPMGG00000022162	snrpc	100	95.205	ENSMZEG00005002199	snrpc	98	95.205	Maylandia_zebra
ENSPMGG00000022162	snrpc	100	62.162	ENSMICG00000036552	-	87	62.838	Microcebus_murinus
ENSPMGG00000022162	snrpc	99	59.732	ENSMICG00000009130	-	98	67.606	Microcebus_murinus
ENSPMGG00000022162	snrpc	100	64.375	ENSMICG00000032183	-	98	64.103	Microcebus_murinus
ENSPMGG00000022162	snrpc	100	97.902	ENSMMOG00000013149	snrpc	100	97.902	Mola_mola
ENSPMGG00000022162	snrpc	50	84.722	ENSMODG00000025263	-	98	65.493	Monodelphis_domestica
ENSPMGG00000022162	snrpc	100	95.833	ENSMALG00000001197	snrpc	98	95.833	Monopterus_albus
ENSPMGG00000022162	snrpc	100	95.205	ENSONIG00000014757	snrpc	98	95.205	Oreochromis_niloticus
ENSPMGG00000022162	snrpc	50	90.141	ENSOCUG00000026430	-	98	59.236	Oryctolagus_cuniculus
ENSPMGG00000022162	snrpc	96	94.245	ENSORLG00000007308	snrpc	95	94.245	Oryzias_latipes
ENSPMGG00000022162	snrpc	96	93.571	ENSORLG00020012607	SNRPC	95	93.571	Oryzias_latipes_hni
ENSPMGG00000022162	snrpc	73	97.143	ENSOMEG00000012014	snrpc	65	97.143	Oryzias_melastigma
ENSPMGG00000022162	snrpc	95	56.667	ENSOGAG00000028405	-	66	53.922	Otolemur_garnettii
ENSPMGG00000022162	snrpc	100	51.724	ENSPTIG00000011880	-	54	59.459	Panthera_tigris_altaica
ENSPMGG00000022162	snrpc	99	59.615	ENSPANG00000018228	-	92	52.229	Papio_anubis
ENSPMGG00000022162	snrpc	56	84.615	ENSPKIG00000003136	snrpc	99	69.935	Paramormyrops_kingsleyae
ENSPMGG00000022162	snrpc	100	75.641	ENSPKIG00000001671	SNRPC	58	63.736	Paramormyrops_kingsleyae
ENSPMGG00000022162	snrpc	100	67.742	ENSPEMG00000002763	-	98	63.946	Peromyscus_maniculatus_bairdii
ENSPMGG00000022162	snrpc	100	96.528	ENSPFOG00000015174	snrpc	98	96.528	Poecilia_formosa
ENSPMGG00000022162	snrpc	100	96.528	ENSPLAG00000012311	snrpc	98	96.528	Poecilia_latipinna
ENSPMGG00000022162	snrpc	100	96.528	ENSPMEG00000010274	snrpc	98	96.528	Poecilia_mexicana
ENSPMGG00000022162	snrpc	100	77.241	ENSPREG00000013017	snrpc	81	86.207	Poecilia_reticulata
ENSPMGG00000022162	snrpc	65	67.778	ENSPPYG00000029902	-	60	98.305	Pongo_abelii
ENSPMGG00000022162	snrpc	98	88.321	ENSPNYG00000004900	snrpc	100	88.321	Pundamilia_nyererei
ENSPMGG00000022162	snrpc	100	73.077	ENSPNAG00000012799	snrpc	99	74.000	Pygocentrus_nattereri
ENSPMGG00000022162	snrpc	100	64.336	ENSSBOG00000032882	-	93	60.563	Saimiri_boliviensis_boliviensis
ENSPMGG00000022162	snrpc	98	63.399	ENSSBOG00000023189	-	55	56.522	Saimiri_boliviensis_boliviensis
ENSPMGG00000022162	snrpc	92	59.155	ENSSBOG00000032361	-	82	49.194	Saimiri_boliviensis_boliviensis
ENSPMGG00000022162	snrpc	50	84.722	ENSSHAG00000002972	-	98	65.493	Sarcophilus_harrisii
ENSPMGG00000022162	snrpc	55	83.146	ENSSFOG00015022422	snrpc	96	65.605	Scleropages_formosus
ENSPMGG00000022162	snrpc	56	79.121	ENSSFOG00015019150	snrpc	98	59.615	Scleropages_formosus
ENSPMGG00000022162	snrpc	100	96.552	ENSSMAG00000008029	snrpc	98	96.552	Scophthalmus_maximus
ENSPMGG00000022162	snrpc	100	96.552	ENSSDUG00000018895	snrpc	80	96.552	Seriola_dumerili
ENSPMGG00000022162	snrpc	100	96.552	ENSSLDG00000005034	snrpc	98	96.552	Seriola_lalandi_dorsalis
ENSPMGG00000022162	snrpc	65	68.889	ENSSARG00000008970	SNRPC	88	53.503	Sorex_araneus
ENSPMGG00000022162	snrpc	100	96.552	ENSSPAG00000000914	snrpc	98	96.552	Stegastes_partitus
ENSPMGG00000022162	snrpc	100	84.028	ENSTRUG00000021651	snrpc	98	79.861	Takifugu_rubripes
ENSPMGG00000022162	snrpc	100	79.114	ENSTNIG00000018307	snrpc	99	69.182	Tetraodon_nigroviridis
ENSPMGG00000022162	snrpc	59	74.737	ENSTBEG00000013022	-	97	57.895	Tupaia_belangeri
ENSPMGG00000022162	snrpc	57	71.739	ENSTBEG00000015356	-	65	57.609	Tupaia_belangeri
ENSPMGG00000022162	snrpc	54	62.667	ENSVPAG00000003106	SNRPC	79	48.592	Vicugna_pacos
ENSPMGG00000022162	snrpc	99	73.377	ENSVVUG00000010467	-	52	61.290	Vulpes_vulpes
ENSPMGG00000022162	snrpc	99	54.268	ENSXETG00000024721	snrpc	99	67.516	Xenopus_tropicalis
ENSPMGG00000022162	snrpc	100	95.745	ENSXCOG00000015871	-	100	95.745	Xiphophorus_couchianus
ENSPMGG00000022162	snrpc	100	96.528	ENSXMAG00000017935	snrpc	98	96.528	Xiphophorus_maculatus