EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000022253 (Gene tree)
Gene ID: -
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 6419 bases
Position: chrKN463447.1:918188-924606
Accession: 30129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000027806	POP1	PF06978.11	3.5e-34	1	2
ENSPMGP00000027806	POP1	PF06978.11	3.5e-34	2	2
ENSPMGP00000027786	POP1	PF06978.11	3.6e-34	1	2
ENSPMGP00000027786	POP1	PF06978.11	3.6e-34	2	2
ENSPMGP00000027776	POP1	PF06978.11	3.9e-34	1	2
ENSPMGP00000027776	POP1	PF06978.11	3.9e-34	2	2
ENSPMGP00000027806	POPLD	PF08170.12	7.2e-28	1	1
ENSPMGP00000027786	POPLD	PF08170.12	7.4e-28	1	1
ENSPMGP00000027776	POPLD	PF08170.12	7.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000029595	POP1-202	2919	-	ENSPMGP00000027786	972 (aa)	-	-
ENSPMGT00000029615	POP1-203	2859	-	ENSPMGP00000027806	952 (aa)	-	-
ENSPMGT00000029583	POP1-201	2985	-	ENSPMGP00000027776	994 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000022253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000022253's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000022253	POP1	95	49.573	ENSG00000104356	POP1	90	49.306	Homo_sapiens
ENSPMGG00000022253	POP1	100	62.697	ENSAPOG00000008198	pop1	100	62.697	Acanthochromis_polyacanthus
ENSPMGG00000022253	POP1	95	48.360	ENSAMEG00000000556	POP1	90	48.677	Ailuropoda_melanoleuca
ENSPMGG00000022253	POP1	100	62.640	ENSACIG00000004169	POP1	100	62.335	Amphilophus_citrinellus
ENSPMGG00000022253	POP1	100	62.732	ENSAOCG00000010991	pop1	100	62.829	Amphiprion_ocellaris
ENSPMGG00000022253	POP1	100	62.690	ENSAPEG00000007607	pop1	100	62.690	Amphiprion_percula
ENSPMGG00000022253	POP1	100	62.439	ENSATEG00000024814	POP1	100	62.770	Anabas_testudineus
ENSPMGG00000022253	POP1	96	48.629	ENSAPLG00000014418	POP1	98	48.523	Anas_platyrhynchos
ENSPMGG00000022253	POP1	94	48.715	ENSACAG00000016083	POP1	100	45.914	Anolis_carolinensis
ENSPMGG00000022253	POP1	81	65.678	ENSANAG00000026360	POP1	89	63.983	Aotus_nancymaae
ENSPMGG00000022253	POP1	93	64.262	ENSACLG00000010951	pop1	100	59.904	Astatotilapia_calliptera
ENSPMGG00000022253	POP1	100	52.212	ENSAMXG00000014483	POP1	100	51.827	Astyanax_mexicanus
ENSPMGG00000022253	POP1	95	48.835	ENSBTAG00000012596	POP1	90	49.892	Bos_taurus
ENSPMGG00000022253	POP1	95	49.145	ENSCJAG00000015567	POP1	91	49.249	Callithrix_jacchus
ENSPMGG00000022253	POP1	95	49.947	ENSCAFG00000000469	POP1	89	50.548	Canis_familiaris
ENSPMGG00000022253	POP1	95	49.947	ENSCAFG00020026765	POP1	90	49.946	Canis_lupus_dingo
ENSPMGG00000022253	POP1	95	49.520	ENSCHIG00000017066	POP1	90	49.511	Capra_hircus
ENSPMGG00000022253	POP1	95	49.363	ENSTSYG00000003097	POP1	90	49.569	Carlito_syrichta
ENSPMGG00000022253	POP1	95	46.908	ENSCAPG00000007251	POP1	90	46.417	Cavia_aperea
ENSPMGG00000022253	POP1	95	48.397	ENSCPOG00000002901	POP1	90	47.910	Cavia_porcellus
ENSPMGG00000022253	POP1	95	49.038	ENSCCAG00000018939	POP1	92	48.666	Cebus_capucinus
ENSPMGG00000022253	POP1	95	49.305	ENSCATG00000040916	POP1	90	49.091	Cercocebus_atys
ENSPMGG00000022253	POP1	95	48.837	ENSCLAG00000007208	POP1	87	48.757	Chinchilla_lanigera
ENSPMGG00000022253	POP1	95	48.891	ENSCSAG00000012340	POP1	99	49.305	Chlorocebus_sabaeus
ENSPMGG00000022253	POP1	88	54.884	ENSCHOG00000011432	POP1	90	53.721	Choloepus_hoffmanni
ENSPMGG00000022253	POP1	95	51.547	ENSCPBG00000006373	POP1	90	50.694	Chrysemys_picta_bellii
ENSPMGG00000022253	POP1	91	34.899	ENSCING00000008323	-	93	33.007	Ciona_intestinalis
ENSPMGG00000022253	POP1	95	48.999	ENSCANG00000001647	POP1	90	49.246	Colobus_angolensis_palliatus
ENSPMGG00000022253	POP1	94	48.436	ENSCGRG00001017308	Pop1	90	48.906	Cricetulus_griseus_chok1gshd
ENSPMGG00000022253	POP1	100	43.406	ENSCGRG00000010824	Pop1	100	43.175	Cricetulus_griseus_crigri
ENSPMGG00000022253	POP1	100	59.195	ENSCSEG00000008737	POP1	100	59.770	Cynoglossus_semilaevis
ENSPMGG00000022253	POP1	100	60.477	ENSCVAG00000022248	pop1	100	60.197	Cyprinodon_variegatus
ENSPMGG00000022253	POP1	51	48.394	ENSDARG00000102087	pop1	99	48.780	Danio_rerio
ENSPMGG00000022253	POP1	95	47.526	ENSDNOG00000019974	POP1	90	47.010	Dasypus_novemcinctus
ENSPMGG00000022253	POP1	95	44.791	ENSDORG00000015384	Pop1	90	42.980	Dipodomys_ordii
ENSPMGG00000022253	POP1	64	31.452	FBgn0026702	l(1)G0045	68	30.707	Drosophila_melanogaster
ENSPMGG00000022253	POP1	83	48.745	ENSETEG00000007839	POP1	78	49.257	Echinops_telfairi
ENSPMGG00000022253	POP1	50	44.355	ENSEBUG00000009897	pop1	96	44.355	Eptatretus_burgeri
ENSPMGG00000022253	POP1	50	35.729	ENSEBUG00000014694	-	99	37.037	Eptatretus_burgeri
ENSPMGG00000022253	POP1	95	50.160	ENSEASG00005003189	POP1	89	49.520	Equus_asinus_asinus
ENSPMGG00000022253	POP1	95	49.947	ENSECAG00000024236	POP1	90	49.404	Equus_caballus
ENSPMGG00000022253	POP1	54	74.026	ENSEEUG00000003050	-	52	78.689	Erinaceus_europaeus
ENSPMGG00000022253	POP1	100	55.490	ENSELUG00000003526	pop1	100	55.984	Esox_lucius
ENSPMGG00000022253	POP1	95	50.213	ENSFCAG00000002168	POP1	90	49.680	Felis_catus
ENSPMGG00000022253	POP1	95	48.879	ENSFALG00000005711	POP1	90	48.346	Ficedula_albicollis
ENSPMGG00000022253	POP1	95	48.323	ENSFDAG00000017068	POP1	90	48.934	Fukomys_damarensis
ENSPMGG00000022253	POP1	100	61.194	ENSFHEG00000019518	pop1	100	61.762	Fundulus_heteroclitus
ENSPMGG00000022253	POP1	100	57.344	ENSGMOG00000000659	POP1	100	57.143	Gadus_morhua
ENSPMGG00000022253	POP1	100	61.623	ENSGAFG00000019770	POP1	100	61.723	Gambusia_affinis
ENSPMGG00000022253	POP1	94	62.620	ENSGACG00000003499	pop1	90	62.947	Gasterosteus_aculeatus
ENSPMGG00000022253	POP1	95	50.853	ENSGAGG00000011737	POP1	88	50.000	Gopherus_agassizii
ENSPMGG00000022253	POP1	95	49.733	ENSGGOG00000003176	POP1	90	49.677	Gorilla_gorilla
ENSPMGG00000022253	POP1	93	64.372	ENSHBUG00000021583	pop1	100	60.000	Haplochromis_burtoni
ENSPMGG00000022253	POP1	94	47.923	ENSHGLG00000006029	POP1	90	47.932	Heterocephalus_glaber_female
ENSPMGG00000022253	POP1	94	47.923	ENSHGLG00100016879	POP1	90	47.932	Heterocephalus_glaber_male
ENSPMGG00000022253	POP1	100	60.861	ENSHCOG00000013888	pop1	100	60.041	Hippocampus_comes
ENSPMGG00000022253	POP1	100	50.095	ENSIPUG00000018336	pop1	100	50.000	Ictalurus_punctatus
ENSPMGG00000022253	POP1	95	48.984	ENSSTOG00000011455	POP1	87	48.596	Ictidomys_tridecemlineatus
ENSPMGG00000022253	POP1	95	46.888	ENSJJAG00000013325	Pop1	89	47.792	Jaculus_jaculus
ENSPMGG00000022253	POP1	100	61.577	ENSKMAG00000001346	POP1	100	61.776	Kryptolebias_marmoratus
ENSPMGG00000022253	POP1	100	62.140	ENSLBEG00000024457	POP1	100	62.140	Labrus_bergylta
ENSPMGG00000022253	POP1	95	49.742	ENSLACG00000012498	POP1	96	49.846	Latimeria_chalumnae
ENSPMGG00000022253	POP1	98	54.236	ENSLOCG00000009817	POP1	94	53.846	Lepisosteus_oculatus
ENSPMGG00000022253	POP1	95	50.799	ENSLAFG00000010770	POP1	90	50.479	Loxodonta_africana
ENSPMGG00000022253	POP1	95	49.091	ENSMFAG00000000347	POP1	90	49.246	Macaca_fascicularis
ENSPMGG00000022253	POP1	95	49.145	ENSMNEG00000036870	POP1	90	49.300	Macaca_nemestrina
ENSPMGG00000022253	POP1	95	49.198	ENSMLEG00000034986	POP1	90	49.353	Mandrillus_leucophaeus
ENSPMGG00000022253	POP1	100	63.127	ENSMAMG00000004040	pop1	100	63.297	Mastacembelus_armatus
ENSPMGG00000022253	POP1	93	64.153	ENSMZEG00005025448	pop1	100	59.808	Maylandia_zebra
ENSPMGG00000022253	POP1	100	46.073	ENSMGAG00000012167	POP1	100	45.498	Meleagris_gallopavo
ENSPMGG00000022253	POP1	95	48.602	ENSMAUG00000017537	Pop1	90	48.684	Mesocricetus_auratus
ENSPMGG00000022253	POP1	95	49.573	ENSMICG00000004361	POP1	90	48.870	Microcebus_murinus
ENSPMGG00000022253	POP1	95	47.548	ENSMOCG00000006356	Pop1	90	48.253	Microtus_ochrogaster
ENSPMGG00000022253	POP1	100	61.698	ENSMMOG00000018242	pop1	100	62.151	Mola_mola
ENSPMGG00000022253	POP1	95	49.265	ENSMODG00000006561	POP1	90	49.160	Monodelphis_domestica
ENSPMGG00000022253	POP1	100	61.106	ENSMALG00000012621	POP1	100	60.463	Monopterus_albus
ENSPMGG00000022253	POP1	95	47.785	MGP_CAROLIEiJ_G0019726	Pop1	90	48.701	Mus_caroli
ENSPMGG00000022253	POP1	95	47.950	ENSMUSG00000022325	Pop1	90	48.652	Mus_musculus
ENSPMGG00000022253	POP1	95	47.468	MGP_PahariEiJ_G0019735	Pop1	90	48.419	Mus_pahari
ENSPMGG00000022253	POP1	95	47.275	MGP_SPRETEiJ_G0020622	Pop1	90	48.640	Mus_spretus
ENSPMGG00000022253	POP1	95	49.628	ENSMPUG00000015250	POP1	90	50.000	Mustela_putorius_furo
ENSPMGG00000022253	POP1	95	46.474	ENSMLUG00000010204	POP1	90	46.739	Myotis_lucifugus
ENSPMGG00000022253	POP1	95	49.626	ENSNGAG00000001582	Pop1	90	48.822	Nannospalax_galili
ENSPMGG00000022253	POP1	100	62.101	ENSNBRG00000002356	pop1	100	62.204	Neolamprologus_brichardi
ENSPMGG00000022253	POP1	95	49.145	ENSNLEG00000002541	POP1	90	49.412	Nomascus_leucogenys
ENSPMGG00000022253	POP1	87	58.044	ENSMEUG00000003118	POP1	88	55.205	Notamacropus_eugenii
ENSPMGG00000022253	POP1	100	46.737	ENSOPRG00000007667	POP1	100	46.161	Ochotona_princeps
ENSPMGG00000022253	POP1	94	48.321	ENSODEG00000003984	POP1	90	48.550	Octodon_degus
ENSPMGG00000022253	POP1	100	61.455	ENSONIG00000016445	pop1	100	61.554	Oreochromis_niloticus
ENSPMGG00000022253	POP1	52	64.286	ENSOANG00000001278	-	79	64.286	Ornithorhynchus_anatinus
ENSPMGG00000022253	POP1	100	46.080	ENSOCUG00000017400	POP1	100	45.933	Oryctolagus_cuniculus
ENSPMGG00000022253	POP1	100	62.335	ENSORLG00000002839	pop1	100	62.741	Oryzias_latipes
ENSPMGG00000022253	POP1	100	63.043	ENSORLG00020022450	POP1	100	63.495	Oryzias_latipes_hni
ENSPMGG00000022253	POP1	100	61.866	ENSORLG00015012746	POP1	100	62.576	Oryzias_latipes_hsok
ENSPMGG00000022253	POP1	100	60.812	ENSOMEG00000006915	pop1	99	61.421	Oryzias_melastigma
ENSPMGG00000022253	POP1	95	49.469	ENSOGAG00000001466	POP1	90	49.247	Otolemur_garnettii
ENSPMGG00000022253	POP1	95	49.626	ENSPPAG00000018410	POP1	90	49.359	Pan_paniscus
ENSPMGG00000022253	POP1	95	49.466	ENSPPRG00000005002	POP1	90	49.200	Panthera_pardus
ENSPMGG00000022253	POP1	95	49.679	ENSPTIG00000016527	POP1	90	49.145	Panthera_tigris_altaica
ENSPMGG00000022253	POP1	95	49.679	ENSPTRG00000020458	POP1	90	49.413	Pan_troglodytes
ENSPMGG00000022253	POP1	95	49.198	ENSPANG00000009704	POP1	90	49.353	Papio_anubis
ENSPMGG00000022253	POP1	100	53.210	ENSPKIG00000016325	POP1	100	53.113	Paramormyrops_kingsleyae
ENSPMGG00000022253	POP1	95	50.000	ENSPSIG00000012343	POP1	89	50.219	Pelodiscus_sinensis
ENSPMGG00000022253	POP1	95	47.643	ENSPEMG00000023633	Pop1	90	48.148	Peromyscus_maniculatus_bairdii
ENSPMGG00000022253	POP1	95	42.208	ENSPMAG00000003209	POP1	100	42.284	Petromyzon_marinus
ENSPMGG00000022253	POP1	95	48.750	ENSPCIG00000012216	POP1	90	48.017	Phascolarctos_cinereus
ENSPMGG00000022253	POP1	100	61.700	ENSPFOG00000012490	POP1	100	61.800	Poecilia_formosa
ENSPMGG00000022253	POP1	100	61.361	ENSPLAG00000004646	POP1	100	61.461	Poecilia_latipinna
ENSPMGG00000022253	POP1	100	62.187	ENSPMEG00000019592	POP1	100	62.287	Poecilia_mexicana
ENSPMGG00000022253	POP1	100	61.155	ENSPREG00000020951	POP1	100	61.439	Poecilia_reticulata
ENSPMGG00000022253	POP1	95	49.679	ENSPPYG00000018777	POP1	90	49.679	Pongo_abelii
ENSPMGG00000022253	POP1	95	46.203	ENSPCAG00000016662	POP1	90	46.262	Procavia_capensis
ENSPMGG00000022253	POP1	95	49.200	ENSPCOG00000019420	POP1	90	48.666	Propithecus_coquereli
ENSPMGG00000022253	POP1	95	48.712	ENSPVAG00000014468	POP1	90	49.028	Pteropus_vampyrus
ENSPMGG00000022253	POP1	100	61.468	ENSPNYG00000004476	pop1	100	61.396	Pundamilia_nyererei
ENSPMGG00000022253	POP1	100	51.448	ENSPNAG00000000265	pop1	100	51.351	Pygocentrus_nattereri
ENSPMGG00000022253	POP1	95	48.507	ENSRNOG00000005243	Pop1	90	48.550	Rattus_norvegicus
ENSPMGG00000022253	POP1	95	49.305	ENSRBIG00000007996	POP1	90	49.246	Rhinopithecus_bieti
ENSPMGG00000022253	POP1	95	49.305	ENSRROG00000012334	POP1	90	49.246	Rhinopithecus_roxellana
ENSPMGG00000022253	POP1	95	48.827	ENSSBOG00000020830	POP1	91	48.608	Saimiri_boliviensis_boliviensis
ENSPMGG00000022253	POP1	95	49.001	ENSSHAG00000000296	POP1	90	48.000	Sarcophilus_harrisii
ENSPMGG00000022253	POP1	100	55.600	ENSSFOG00015007429	pop1	99	55.600	Scleropages_formosus
ENSPMGG00000022253	POP1	100	63.880	ENSSMAG00000010467	POP1	100	64.153	Scophthalmus_maximus
ENSPMGG00000022253	POP1	100	63.014	ENSSDUG00000007817	POP1	100	64.286	Seriola_dumerili
ENSPMGG00000022253	POP1	100	62.488	ENSSLDG00000012565	POP1	100	62.967	Seriola_lalandi_dorsalis
ENSPMGG00000022253	POP1	95	47.609	ENSSPUG00000003550	-	86	67.647	Sphenodon_punctatus
ENSPMGG00000022253	POP1	100	65.773	ENSSPAG00000014955	pop1	100	65.773	Stegastes_partitus
ENSPMGG00000022253	POP1	95	49.624	ENSSSCG00000006078	POP1	90	49.619	Sus_scrofa
ENSPMGG00000022253	POP1	95	44.149	ENSTGUG00000012011	-	98	43.524	Taeniopygia_guttata
ENSPMGG00000022253	POP1	100	62.334	ENSTRUG00000010856	pop1	100	62.334	Takifugu_rubripes
ENSPMGG00000022253	POP1	95	64.316	ENSTNIG00000013297	pop1	96	65.104	Tetraodon_nigroviridis
ENSPMGG00000022253	POP1	95	47.053	ENSTBEG00000014214	POP1	94	46.567	Tupaia_belangeri
ENSPMGG00000022253	POP1	95	47.604	ENSTTRG00000016071	POP1	90	47.835	Tursiops_truncatus
ENSPMGG00000022253	POP1	99	47.848	ENSUAMG00000017309	POP1	97	47.817	Ursus_americanus
ENSPMGG00000022253	POP1	87	64.375	ENSUMAG00000016952	POP1	89	61.875	Ursus_maritimus
ENSPMGG00000022253	POP1	77	64.740	ENSVPAG00000008278	POP1	72	65.680	Vicugna_pacos
ENSPMGG00000022253	POP1	95	49.841	ENSVVUG00000010994	POP1	90	49.837	Vulpes_vulpes
ENSPMGG00000022253	POP1	100	56.132	ENSXCOG00000017043	POP1	100	55.932	Xiphophorus_couchianus
ENSPMGG00000022253	POP1	100	61.615	ENSXMAG00000002472	POP1	100	61.900	Xiphophorus_maculatus