EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPMGG00000022487 (Gene tree)
Gene ID
-
Gene Symbol
pabpc1a
Alias
-
Full Name
poly(A) binding protein%2C cytoplasmic 1a
Gene Type
protein_coding
Species
Periophthalmus_magnuspinnatus
Status
putative
Strand
Minus strand
Length
2670 bases
Position
chrKN463447.1:1369207-1371876
Accession
ZDB-GENE-030131-3238
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMGP00000027884RRM_5PF13893.69.1e-0711
ENSPMGP00000027884RRM_1PF00076.226.6e-8914
ENSPMGP00000027884RRM_1PF00076.226.6e-8924
ENSPMGP00000027884RRM_1PF00076.226.6e-8934
ENSPMGP00000027884RRM_1PF00076.226.6e-8944
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMGT00000029701-1452-ENSPMGP00000027884483 (aa)--
Gene Model
Click here to download ENSPMGG00000022487's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000022487's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMGG00000022487pabpc1a7679.082ENSG00000184388PABPC1L2B9879.082Homo_sapiens
ENSPMGG00000022487pabpc1a7679.082ENSG00000186288PABPC1L2A9879.082Homo_sapiens
ENSPMGG00000022487pabpc1a9391.832ENSAPOG00000017776pabpc1b7491.832Acanthochromis_polyacanthus
ENSPMGG00000022487pabpc1a9298.202ENSAPOG00000015105pabpc1a7098.202Acanthochromis_polyacanthus
ENSPMGG00000022487pabpc1a7679.082ENSAMEG00000019441-9879.082Ailuropoda_melanoleuca
ENSPMGG00000022487pabpc1a9688.627ENSACIG00000018366pabpc1b7885.685Amphilophus_citrinellus
ENSPMGG00000022487pabpc1a9298.427ENSACIG00000004685pabpc1a7098.427Amphilophus_citrinellus
ENSPMGG00000022487pabpc1a9298.202ENSAOCG00000011656pabpc1a7098.202Amphiprion_ocellaris
ENSPMGG00000022487pabpc1a9292.152ENSAOCG00000019839pabpc1b7092.152Amphiprion_ocellaris
ENSPMGG00000022487pabpc1a9298.202ENSAPEG00000006963pabpc1a7098.202Amphiprion_percula
ENSPMGG00000022487pabpc1a9292.152ENSAPEG00000010435pabpc1b7092.152Amphiprion_percula
ENSPMGG00000022487pabpc1a9297.978ENSATEG00000024852pabpc1a7097.978Anabas_testudineus
ENSPMGG00000022487pabpc1a9292.360ENSATEG00000012917pabpc1b7092.360Anabas_testudineus
ENSPMGG00000022487pabpc1a7679.082ENSANAG00000019431-9879.082Aotus_nancymaae
ENSPMGG00000022487pabpc1a7679.082ENSANAG00000019429-9879.082Aotus_nancymaae
ENSPMGG00000022487pabpc1a9298.202ENSACLG00000009399pabpc1a8098.077Astatotilapia_calliptera
ENSPMGG00000022487pabpc1a9292.152ENSACLG00000014335pabpc1b7092.152Astatotilapia_calliptera
ENSPMGG00000022487pabpc1a9293.258ENSAMXG00000008599pabpc1b7093.258Astyanax_mexicanus
ENSPMGG00000022487pabpc1a7776.077ENSBTAG00000052491-9876.077Bos_taurus
ENSPMGG00000022487pabpc1a7778.049ENSBTAG00000050902-9878.049Bos_taurus
ENSPMGG00000022487pabpc1a7679.082ENSCJAG00000041326-9879.082Callithrix_jacchus
ENSPMGG00000022487pabpc1a7778.049ENSCAFG00020002052-9878.049Canis_lupus_dingo
ENSPMGG00000022487pabpc1a7679.082ENSCHIG00000011138-9879.082Capra_hircus
ENSPMGG00000022487pabpc1a7679.082ENSCHIG00000006283-9879.082Capra_hircus
ENSPMGG00000022487pabpc1a7679.082ENSTSYG00000001775-9879.082Carlito_syrichta
ENSPMGG00000022487pabpc1a7679.082ENSCPOG00000009525-9879.082Cavia_porcellus
ENSPMGG00000022487pabpc1a7679.082ENSCCAG00000031524-9879.082Cebus_capucinus
ENSPMGG00000022487pabpc1a7679.082ENSCATG00000043125-9879.082Cercocebus_atys
ENSPMGG00000022487pabpc1a7679.082ENSCATG00000042826-9879.082Cercocebus_atys
ENSPMGG00000022487pabpc1a7577.041ENSCLAG00000017412-9877.041Chinchilla_lanigera
ENSPMGG00000022487pabpc1a7577.041ENSCLAG00000017409-9877.041Chinchilla_lanigera
ENSPMGG00000022487pabpc1a7779.082ENSCSAG00000000102-9879.082Chlorocebus_sabaeus
ENSPMGG00000022487pabpc1a7579.670ENSCGRG00001023387-9676.410Cricetulus_griseus_chok1gshd
ENSPMGG00000022487pabpc1a9291.928ENSCSEG00000015241-7091.928Cynoglossus_semilaevis
ENSPMGG00000022487pabpc1a9297.978ENSCSEG00000013324pabpc1a7097.978Cynoglossus_semilaevis
ENSPMGG00000022487pabpc1a9291.031ENSCVAG00000005489pabpc1b7091.031Cyprinodon_variegatus
ENSPMGG00000022487pabpc1a9298.202ENSCVAG00000021872pabpc1a7098.202Cyprinodon_variegatus
ENSPMGG00000022487pabpc1a9293.034ENSDARG00000021140pabpc1b9992.199Danio_rerio
ENSPMGG00000022487pabpc1a9294.607ENSDARG00000017219pabpc1a7094.607Danio_rerio
ENSPMGG00000022487pabpc1a7580.423ENSDNOG00000030926-9878.061Dasypus_novemcinctus
ENSPMGG00000022487pabpc1a7677.665ENSDORG00000011362-9877.665Dipodomys_ordii
ENSPMGG00000022487pabpc1a7777.670ENSEASG00005010399-9877.670Equus_asinus_asinus
ENSPMGG00000022487pabpc1a7777.670ENSECAG00000002620-9877.670Equus_caballus
ENSPMGG00000022487pabpc1a7775.000ENSEEUG00000008203-9875.000Erinaceus_europaeus
ENSPMGG00000022487pabpc1a9292.634ENSELUG00000015062-7092.634Esox_lucius
ENSPMGG00000022487pabpc1a7759.375ENSELUG00000005389-9759.375Esox_lucius
ENSPMGG00000022487pabpc1a9295.078ENSELUG00000003614pabpc1a7195.078Esox_lucius
ENSPMGG00000022487pabpc1a7679.082ENSFCAG00000039701-9879.082Felis_catus
ENSPMGG00000022487pabpc1a7679.082ENSFDAG00000005484-9879.082Fukomys_damarensis
ENSPMGG00000022487pabpc1a9292.601ENSFHEG00000008186pabpc1b7092.601Fundulus_heteroclitus
ENSPMGG00000022487pabpc1a9298.202ENSFHEG00000018979pabpc1a7098.202Fundulus_heteroclitus
ENSPMGG00000022487pabpc1a8492.629ENSGMOG00000002448-6392.629Gadus_morhua
ENSPMGG00000022487pabpc1a9297.079ENSGMOG00000013448pabpc1a6997.079Gadus_morhua
ENSPMGG00000022487pabpc1a9292.825ENSGAFG00000010193pabpc1b7392.825Gambusia_affinis
ENSPMGG00000022487pabpc1a9297.753ENSGAFG00000019750pabpc1a7497.534Gambusia_affinis
ENSPMGG00000022487pabpc1a9291.704ENSGACG00000003771pabpc1b7890.088Gasterosteus_aculeatus
ENSPMGG00000022487pabpc1a9297.753ENSGACG00000003572pabpc1a7097.753Gasterosteus_aculeatus
ENSPMGG00000022487pabpc1a7679.082ENSGGOG00000038606-9879.082Gorilla_gorilla
ENSPMGG00000022487pabpc1a7679.082ENSGGOG00000043933-9879.082Gorilla_gorilla
ENSPMGG00000022487pabpc1a9298.202ENSHBUG00000020487pabpc1a8098.077Haplochromis_burtoni
ENSPMGG00000022487pabpc1a9292.152ENSHBUG00000002075pabpc1b7590.591Haplochromis_burtoni
ENSPMGG00000022487pabpc1a7679.188ENSHGLG00000019668-9879.188Heterocephalus_glaber_female
ENSPMGG00000022487pabpc1a7679.188ENSHGLG00000019762-9879.188Heterocephalus_glaber_female
ENSPMGG00000022487pabpc1a7679.188ENSHGLG00100020854-9879.188Heterocephalus_glaber_male
ENSPMGG00000022487pabpc1a9297.528ENSHCOG00000013502pabpc1a7097.528Hippocampus_comes
ENSPMGG00000022487pabpc1a9275.847ENSHCOG00000003175pabpc1b8475.847Hippocampus_comes
ENSPMGG00000022487pabpc1a7856.250ENSIPUG00000018724-6856.250Ictalurus_punctatus
ENSPMGG00000022487pabpc1a9455.773ENSIPUG00000021244-6255.773Ictalurus_punctatus
ENSPMGG00000022487pabpc1a9295.056ENSIPUG00000008848pabpc1a7295.056Ictalurus_punctatus
ENSPMGG00000022487pabpc1a9293.034ENSIPUG00000010791-7493.034Ictalurus_punctatus
ENSPMGG00000022487pabpc1a7678.571ENSSTOG00000026028-9878.571Ictidomys_tridecemlineatus
ENSPMGG00000022487pabpc1a7678.571ENSSTOG00000022096-9878.571Ictidomys_tridecemlineatus
ENSPMGG00000022487pabpc1a7678.680ENSJJAG00000007037-9878.680Jaculus_jaculus
ENSPMGG00000022487pabpc1a9297.978ENSKMAG00000000605pabpc1a7097.978Kryptolebias_marmoratus
ENSPMGG00000022487pabpc1a9491.466ENSKMAG00000008049pabpc1b7891.466Kryptolebias_marmoratus
ENSPMGG00000022487pabpc1a9297.303ENSLBEG00000024002-7097.303Labrus_bergylta
ENSPMGG00000022487pabpc1a9292.152ENSLBEG00000026845pabpc1b7092.152Labrus_bergylta
ENSPMGG00000022487pabpc1a7777.949ENSLAFG00000023096-9877.949Loxodonta_africana
ENSPMGG00000022487pabpc1a7678.680ENSMFAG00000028878-9878.680Macaca_fascicularis
ENSPMGG00000022487pabpc1a7679.082ENSMMUG00000009740-9879.082Macaca_mulatta
ENSPMGG00000022487pabpc1a7679.082ENSMMUG00000037681-9879.082Macaca_mulatta
ENSPMGG00000022487pabpc1a7679.082ENSMMUG00000039929-9879.082Macaca_mulatta
ENSPMGG00000022487pabpc1a7679.082ENSMNEG00000037732-9879.082Macaca_nemestrina
ENSPMGG00000022487pabpc1a7679.082ENSMLEG00000027495-9879.082Mandrillus_leucophaeus
ENSPMGG00000022487pabpc1a9297.978ENSMAMG00000004502-8991.429Mastacembelus_armatus
ENSPMGG00000022487pabpc1a9490.889ENSMAMG00000014610pabpc1b7490.889Mastacembelus_armatus
ENSPMGG00000022487pabpc1a9292.152ENSMZEG00005026745pabpc1b7092.152Maylandia_zebra
ENSPMGG00000022487pabpc1a9298.202ENSMZEG00005025416pabpc1a8098.077Maylandia_zebra
ENSPMGG00000022487pabpc1a7679.082ENSMICG00000047642-9879.082Microcebus_murinus
ENSPMGG00000022487pabpc1a9295.982ENSMMOG00000018044pabpc1a8096.635Mola_mola
ENSPMGG00000022487pabpc1a9290.562ENSMMOG00000018009pabpc1b7987.366Mola_mola
ENSPMGG00000022487pabpc1a9370.925ENSMODG00000015024-7170.925Monodelphis_domestica
ENSPMGG00000022487pabpc1a9178.636ENSMODG00000013156-7474.894Monodelphis_domestica
ENSPMGG00000022487pabpc1a9595.879ENSMALG00000013020-7895.879Monopterus_albus
ENSPMGG00000022487pabpc1a9292.377ENSMALG00000006066pabpc1b7692.377Monopterus_albus
ENSPMGG00000022487pabpc1a7581.967ENSNGAG00000012688-9877.551Nannospalax_galili
ENSPMGG00000022487pabpc1a9292.377ENSNBRG00000013737pabpc1b7592.360Neolamprologus_brichardi
ENSPMGG00000022487pabpc1a9298.202ENSNBRG00000003068-8098.077Neolamprologus_brichardi
ENSPMGG00000022487pabpc1a7679.082ENSNLEG00000018128-9879.082Nomascus_leucogenys
ENSPMGG00000022487pabpc1a7578.571ENSODEG00000018540-9878.571Octodon_degus
ENSPMGG00000022487pabpc1a9297.978ENSONIG00000006871-7097.978Oreochromis_niloticus
ENSPMGG00000022487pabpc1a9291.928ENSONIG00000002717pabpc1b7091.928Oreochromis_niloticus
ENSPMGG00000022487pabpc1a7679.082ENSOCUG00000002565-9879.082Oryctolagus_cuniculus
ENSPMGG00000022487pabpc1a9892.887ENSORLG00000002691pabpc1a8296.934Oryzias_latipes
ENSPMGG00000022487pabpc1a9287.892ENSORLG00000003008-7187.892Oryzias_latipes
ENSPMGG00000022487pabpc1a9287.892ENSORLG00020022259-7187.892Oryzias_latipes_hni
ENSPMGG00000022487pabpc1a9892.887ENSORLG00020022398pabpc1a7592.500Oryzias_latipes_hni
ENSPMGG00000022487pabpc1a9892.887ENSORLG00015013633pabpc17592.500Oryzias_latipes_hsok
ENSPMGG00000022487pabpc1a9288.117ENSORLG00015010932-7188.117Oryzias_latipes_hsok
ENSPMGG00000022487pabpc1a9083.413ENSOMEG00000013627pabpc1b8083.413Oryzias_melastigma
ENSPMGG00000022487pabpc1a9297.753ENSOMEG00000020219pabpc1a7097.753Oryzias_melastigma
ENSPMGG00000022487pabpc1a7679.082ENSOGAG00000026047-9879.082Otolemur_garnettii
ENSPMGG00000022487pabpc1a7679.082ENSOGAG00000029513-9879.082Otolemur_garnettii
ENSPMGG00000022487pabpc1a7679.082ENSOARG00000005943-9879.082Ovis_aries
ENSPMGG00000022487pabpc1a7679.082ENSPPAG00000012920-9879.082Pan_paniscus
ENSPMGG00000022487pabpc1a7679.082ENSPPRG00000011809-9879.082Panthera_pardus
ENSPMGG00000022487pabpc1a7679.082ENSPPRG00000011804-9879.082Panthera_pardus
ENSPMGG00000022487pabpc1a7679.082ENSPTRG00000028252-9879.082Pan_troglodytes
ENSPMGG00000022487pabpc1a7679.082ENSPANG00000011549-9879.082Papio_anubis
ENSPMGG00000022487pabpc1a9293.258ENSPKIG00000005676pabpc1b7093.258Paramormyrops_kingsleyae
ENSPMGG00000022487pabpc1a9490.529ENSPMGG00000023134-9990.529Periophthalmus_magnuspinnatus
ENSPMGG00000022487pabpc1a9292.601ENSPFOG00000005917pabpc1b7092.601Poecilia_formosa
ENSPMGG00000022487pabpc1a9298.202ENSPFOG00000010815pabpc1a6998.202Poecilia_formosa
ENSPMGG00000022487pabpc1a9298.202ENSPLAG00000004114pabpc1a7098.202Poecilia_latipinna
ENSPMGG00000022487pabpc1a9292.825ENSPLAG00000001388pabpc1b7092.825Poecilia_latipinna
ENSPMGG00000022487pabpc1a9298.202ENSPMEG00000001334pabpc1a7098.202Poecilia_mexicana
ENSPMGG00000022487pabpc1a9292.601ENSPMEG00000014399pabpc1b7785.954Poecilia_mexicana
ENSPMGG00000022487pabpc1a9893.263ENSPREG00000019595pabpc1a9696.789Poecilia_reticulata
ENSPMGG00000022487pabpc1a9292.825ENSPREG00000010911pabpc1b7392.825Poecilia_reticulata
ENSPMGG00000022487pabpc1a7779.082ENSPPYG00000020468-9879.082Pongo_abelii
ENSPMGG00000022487pabpc1a7779.082ENSPCAG00000005308-9879.082Procavia_capensis
ENSPMGG00000022487pabpc1a7679.695ENSPCOG00000026349-9879.695Propithecus_coquereli
ENSPMGG00000022487pabpc1a7780.000ENSPVAG00000016117-9880.000Pteropus_vampyrus
ENSPMGG00000022487pabpc1a9298.202ENSPNYG00000005192pabpc1a7793.694Pundamilia_nyererei
ENSPMGG00000022487pabpc1a9292.152ENSPNYG00000012578pabpc1b7590.591Pundamilia_nyererei
ENSPMGG00000022487pabpc1a9292.809ENSPNAG00000024626pabpc1b7092.809Pygocentrus_nattereri
ENSPMGG00000022487pabpc1a9294.831ENSPNAG00000028408pabpc1a7894.831Pygocentrus_nattereri
ENSPMGG00000022487pabpc1a7679.082ENSRBIG00000027173-9879.082Rhinopithecus_bieti
ENSPMGG00000022487pabpc1a9686.304ENSRBIG00000028738-8188.787Rhinopithecus_bieti
ENSPMGG00000022487pabpc1a7679.082ENSRROG00000017404-9879.082Rhinopithecus_roxellana
ENSPMGG00000022487pabpc1a9967.280ENSSHAG00000000511-7967.280Sarcophilus_harrisii
ENSPMGG00000022487pabpc1a9293.258ENSSFOG00015006662pabpc1a7093.258Scleropages_formosus
ENSPMGG00000022487pabpc1a9078.613ENSSFOG00015019668-8878.613Scleropages_formosus
ENSPMGG00000022487pabpc1a9293.483ENSSFOG00015002752-7093.483Scleropages_formosus
ENSPMGG00000022487pabpc1a9291.704ENSSMAG00000006869pabpc1b7091.704Scophthalmus_maximus
ENSPMGG00000022487pabpc1a9297.753ENSSMAG00000010803pabpc1a7495.238Scophthalmus_maximus
ENSPMGG00000022487pabpc1a9590.538ENSSDUG00000011965pabpc1b7390.538Seriola_dumerili
ENSPMGG00000022487pabpc1a9297.528ENSSDUG00000006675pabpc1a7097.528Seriola_dumerili
ENSPMGG00000022487pabpc1a9292.239ENSSLDG00000014156pabpc1b7192.239Seriola_lalandi_dorsalis
ENSPMGG00000022487pabpc1a9297.528ENSSLDG00000011661pabpc1a7097.528Seriola_lalandi_dorsalis
ENSPMGG00000022487pabpc1a9292.825ENSSPAG00000019265pabpc1b7792.825Stegastes_partitus
ENSPMGG00000022487pabpc1a9298.427ENSSPAG00000014453-7098.427Stegastes_partitus
ENSPMGG00000022487pabpc1a7679.082ENSSSCG00000032167-9879.082Sus_scrofa
ENSPMGG00000022487pabpc1a7679.082ENSSSCG00000036336-9879.082Sus_scrofa
ENSPMGG00000022487pabpc1a9291.031ENSTRUG00000003767-7687.104Takifugu_rubripes
ENSPMGG00000022487pabpc1a9297.753ENSTRUG00000011577-7097.753Takifugu_rubripes
ENSPMGG00000022487pabpc1a9095.711ENSTNIG00000013307pabpc1a6995.711Tetraodon_nigroviridis
ENSPMGG00000022487pabpc1a9389.845ENSTNIG00000009153pabpc1b7189.845Tetraodon_nigroviridis
ENSPMGG00000022487pabpc1a7779.082ENSTTRG00000013181-9879.082Tursiops_truncatus
ENSPMGG00000022487pabpc1a7679.082ENSUAMG00000008089-9879.082Ursus_americanus
ENSPMGG00000022487pabpc1a7679.082ENSUMAG00000003364-9879.082Ursus_maritimus
ENSPMGG00000022487pabpc1a9559.664ENSUMAG00000023926-8968.508Ursus_maritimus
ENSPMGG00000022487pabpc1a7678.000ENSVVUG00000015892-9778.000Vulpes_vulpes
ENSPMGG00000022487pabpc1a8549.115ENSXETG00000015439-5349.115Xenopus_tropicalis
ENSPMGG00000022487pabpc1a9292.377ENSXCOG00000019901pabpc1b7392.377Xiphophorus_couchianus
ENSPMGG00000022487pabpc1a9297.753ENSXCOG00000017066pabpc1a7497.753Xiphophorus_couchianus
ENSPMGG00000022487pabpc1a9292.825ENSXMAG00000003753pabpc1b9292.916Xiphophorus_maculatus
ENSPMGG00000022487pabpc1a9297.753ENSXMAG00000002555pabpc1a7793.390Xiphophorus_maculatus

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