EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000022539 (Gene tree)
Gene ID: -
Gene Symbol: cnot3b
Alias: -
Full Name: CCR4-NOT transcription complex%2C subunit 3b
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 27706 bases
Position: chrKN461824.1:104886-132591
Accession: ZDB-GENE-030131-5838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000027967	Not3	PF04065.15	2.9e-81	1	1
ENSPMGP00000027966	Not3	PF04065.15	3e-81	1	1
ENSPMGP00000027970	Not3	PF04065.15	1.3e-58	1	1
ENSPMGP00000027969	Not3	PF04065.15	1.4e-58	1	1
ENSPMGP00000027966	NOT2_3_5	PF04153.18	6.1e-29	1	1
ENSPMGP00000027967	NOT2_3_5	PF04153.18	3.5e-16	1	1
ENSPMGP00000027969	NOT2_3_5	PF04153.18	3.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000029791	-	2208	-	ENSPMGP00000027970	735 (aa)	-	-
ENSPMGT00000029787	-	2466	-	ENSPMGP00000027966	821 (aa)	-	-
ENSPMGT00000029788	-	2481	-	ENSPMGP00000027967	826 (aa)	-	-
ENSPMGT00000029790	-	2270	-	ENSPMGP00000027969	756 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000022539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000022539's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000022539	cnot3b	65	79.933	ENSG00000088038	CNOT3	100	90.000	Homo_sapiens
ENSPMGG00000022539	cnot3b	53	93.506	ENSAPOG00000015002	cnot3b	83	93.506	Acanthochromis_polyacanthus
ENSPMGG00000022539	cnot3b	60	81.226	ENSAPOG00000015499	CNOT3	84	80.460	Acanthochromis_polyacanthus
ENSPMGG00000022539	cnot3b	65	80.268	ENSAMEG00000004528	CNOT3	70	83.158	Ailuropoda_melanoleuca
ENSPMGG00000022539	cnot3b	59	93.458	ENSACIG00000006635	cnot3a	92	93.458	Amphilophus_citrinellus
ENSPMGG00000022539	cnot3b	63	95.631	ENSACIG00000003652	cnot3b	92	95.631	Amphilophus_citrinellus
ENSPMGG00000022539	cnot3b	99	64.746	ENSAOCG00000018385	-	100	78.469	Amphiprion_ocellaris
ENSPMGG00000022539	cnot3b	99	71.709	ENSAPEG00000002640	cnot3b	92	94.762	Amphiprion_percula
ENSPMGG00000022539	cnot3b	99	60.067	ENSATEG00000022737	cnot3a	98	60.908	Anabas_testudineus
ENSPMGG00000022539	cnot3b	99	70.860	ENSATEG00000015777	cnot3b	98	70.703	Anabas_testudineus
ENSPMGG00000022539	cnot3b	75	70.037	ENSACAG00000016085	CNOT3	72	82.394	Anolis_carolinensis
ENSPMGG00000022539	cnot3b	80	79.933	ENSANAG00000025756	CNOT3	72	82.807	Aotus_nancymaae
ENSPMGG00000022539	cnot3b	55	48.542	ENSACLG00000021136	cnot3a	98	60.884	Astatotilapia_calliptera
ENSPMGG00000022539	cnot3b	99	71.210	ENSACLG00000016702	cnot3b	98	69.694	Astatotilapia_calliptera
ENSPMGG00000022539	cnot3b	77	86.631	ENSAMXG00000009447	cnot3b	95	84.456	Astyanax_mexicanus
ENSPMGG00000022539	cnot3b	65	80.268	ENSBTAG00000014900	CNOT3	71	82.807	Bos_taurus
ENSPMGG00000022539	cnot3b	65	79.933	ENSCJAG00000001094	CNOT3	69	82.807	Callithrix_jacchus
ENSPMGG00000022539	cnot3b	65	79.933	ENSCAFG00000002699	CNOT3	70	82.807	Canis_familiaris
ENSPMGG00000022539	cnot3b	65	79.933	ENSCAFG00020018359	CNOT3	70	82.807	Canis_lupus_dingo
ENSPMGG00000022539	cnot3b	65	80.268	ENSCHIG00000015302	CNOT3	72	82.807	Capra_hircus
ENSPMGG00000022539	cnot3b	80	79.933	ENSTSYG00000008058	CNOT3	70	82.807	Carlito_syrichta
ENSPMGG00000022539	cnot3b	86	75.380	ENSCAPG00000009533	CNOT3	70	82.807	Cavia_aperea
ENSPMGG00000022539	cnot3b	86	75.380	ENSCPOG00000020741	CNOT3	70	82.807	Cavia_porcellus
ENSPMGG00000022539	cnot3b	80	79.933	ENSCCAG00000036290	CNOT3	72	82.807	Cebus_capucinus
ENSPMGG00000022539	cnot3b	65	79.933	ENSCATG00000030324	CNOT3	70	82.807	Cercocebus_atys
ENSPMGG00000022539	cnot3b	66	80.268	ENSCLAG00000003302	CNOT3	100	86.585	Chinchilla_lanigera
ENSPMGG00000022539	cnot3b	65	79.933	ENSCSAG00000001900	CNOT3	70	82.807	Chlorocebus_sabaeus
ENSPMGG00000022539	cnot3b	71	80.333	ENSCPBG00000011655	CNOT3	72	83.509	Chrysemys_picta_bellii
ENSPMGG00000022539	cnot3b	58	63.964	ENSCING00000000293	-	68	63.964	Ciona_intestinalis
ENSPMGG00000022539	cnot3b	65	79.933	ENSCANG00000013408	CNOT3	70	82.807	Colobus_angolensis_palliatus
ENSPMGG00000022539	cnot3b	65	80.268	ENSCGRG00001000855	Cnot3	70	83.158	Cricetulus_griseus_chok1gshd
ENSPMGG00000022539	cnot3b	51	66.010	ENSCGRG00000012929	Cnot3	65	66.010	Cricetulus_griseus_crigri
ENSPMGG00000022539	cnot3b	99	64.422	ENSCSEG00000016892	cnot3b	98	64.719	Cynoglossus_semilaevis
ENSPMGG00000022539	cnot3b	99	67.293	ENSCVAG00000022122	cnot3b	98	67.257	Cyprinodon_variegatus
ENSPMGG00000022539	cnot3b	99	57.843	ENSDARG00000007135	cnot3a	98	59.416	Danio_rerio
ENSPMGG00000022539	cnot3b	55	57.234	ENSDARG00000019842	cnot3b	98	63.677	Danio_rerio
ENSPMGG00000022539	cnot3b	65	79.933	ENSDNOG00000045972	CNOT3	70	82.807	Dasypus_novemcinctus
ENSPMGG00000022539	cnot3b	65	79.933	ENSDORG00000008021	Cnot3	100	81.609	Dipodomys_ordii
ENSPMGG00000022539	cnot3b	52	100.000	ENSETEG00000006305	CNOT3	52	100.000	Echinops_telfairi
ENSPMGG00000022539	cnot3b	56	72.941	ENSEBUG00000010437	cnot3a	59	72.689	Eptatretus_burgeri
ENSPMGG00000022539	cnot3b	65	79.933	ENSEASG00005021591	CNOT3	70	82.807	Equus_asinus_asinus
ENSPMGG00000022539	cnot3b	65	79.933	ENSECAG00000023181	CNOT3	70	82.807	Equus_caballus
ENSPMGG00000022539	cnot3b	86	69.318	ENSELUG00000014743	cnot3a	98	58.950	Esox_lucius
ENSPMGG00000022539	cnot3b	99	60.902	ENSELUG00000000953	cnot3b	98	63.243	Esox_lucius
ENSPMGG00000022539	cnot3b	65	80.268	ENSFCAG00000014042	CNOT3	70	82.807	Felis_catus
ENSPMGG00000022539	cnot3b	99	65.939	ENSFHEG00000001696	cnot3b	98	66.812	Fundulus_heteroclitus
ENSPMGG00000022539	cnot3b	57	92.991	ENSFHEG00000023166	cnot3a	77	82.800	Fundulus_heteroclitus
ENSPMGG00000022539	cnot3b	93	54.420	ENSGMOG00000005365	cnot3a	96	56.323	Gadus_morhua
ENSPMGG00000022539	cnot3b	99	67.760	ENSGAFG00000003459	cnot3b	98	67.182	Gambusia_affinis
ENSPMGG00000022539	cnot3b	72	80.851	ENSGACG00000009395	cnot3b	79	80.851	Gasterosteus_aculeatus
ENSPMGG00000022539	cnot3b	93	68.063	ENSGAGG00000012677	CNOT3	70	88.302	Gopherus_agassizii
ENSPMGG00000022539	cnot3b	80	79.933	ENSGGOG00000012996	CNOT3	72	82.807	Gorilla_gorilla
ENSPMGG00000022539	cnot3b	55	48.542	ENSHBUG00000005275	cnot3a	98	60.884	Haplochromis_burtoni
ENSPMGG00000022539	cnot3b	99	66.779	ENSHBUG00000019699	cnot3b	98	65.090	Haplochromis_burtoni
ENSPMGG00000022539	cnot3b	64	81.787	ENSHGLG00000008821	CNOT3	100	81.609	Heterocephalus_glaber_female
ENSPMGG00000022539	cnot3b	58	90.233	ENSHGLG00100006181	CNOT3	100	81.609	Heterocephalus_glaber_male
ENSPMGG00000022539	cnot3b	99	56.933	ENSIPUG00000000167	cnot3	91	73.853	Ictalurus_punctatus
ENSPMGG00000022539	cnot3b	99	63.749	ENSIPUG00000009046	cnot3b	98	60.845	Ictalurus_punctatus
ENSPMGG00000022539	cnot3b	63	83.099	ENSSTOG00000028248	CNOT3	70	82.807	Ictidomys_tridecemlineatus
ENSPMGG00000022539	cnot3b	64	80.268	ENSJJAG00000014594	Cnot3	100	81.609	Jaculus_jaculus
ENSPMGG00000022539	cnot3b	99	59.511	ENSKMAG00000004863	cnot3a	97	76.238	Kryptolebias_marmoratus
ENSPMGG00000022539	cnot3b	99	70.350	ENSKMAG00000018723	cnot3b	98	70.833	Kryptolebias_marmoratus
ENSPMGG00000022539	cnot3b	99	63.093	ENSLBEG00000018278	cnot3b	98	67.117	Labrus_bergylta
ENSPMGG00000022539	cnot3b	99	57.990	ENSLBEG00000017296	cnot3a	66	89.734	Labrus_bergylta
ENSPMGG00000022539	cnot3b	65	79.000	ENSLACG00000009742	CNOT3	72	82.105	Latimeria_chalumnae
ENSPMGG00000022539	cnot3b	54	88.587	ENSLOCG00000000005	cnot3b	80	88.587	Lepisosteus_oculatus
ENSPMGG00000022539	cnot3b	65	79.933	ENSMFAG00000040073	CNOT3	70	82.807	Macaca_fascicularis
ENSPMGG00000022539	cnot3b	58	88.991	ENSMMUG00000009698	CNOT3	100	87.500	Macaca_mulatta
ENSPMGG00000022539	cnot3b	66	79.933	ENSMNEG00000036750	CNOT3	70	82.807	Macaca_nemestrina
ENSPMGG00000022539	cnot3b	66	79.933	ENSMLEG00000036579	CNOT3	69	82.807	Mandrillus_leucophaeus
ENSPMGG00000022539	cnot3b	99	68.683	ENSMAMG00000019357	cnot3b	98	69.447	Mastacembelus_armatus
ENSPMGG00000022539	cnot3b	55	48.542	ENSMZEG00005016304	cnot3a	98	60.884	Maylandia_zebra
ENSPMGG00000022539	cnot3b	99	71.554	ENSMZEG00005002466	cnot3b	98	69.923	Maylandia_zebra
ENSPMGG00000022539	cnot3b	87	80.268	ENSMAUG00000014996	Cnot3	89	83.158	Mesocricetus_auratus
ENSPMGG00000022539	cnot3b	65	80.268	ENSMICG00000002370	CNOT3	70	82.807	Microcebus_murinus
ENSPMGG00000022539	cnot3b	68	92.417	ENSMMOG00000013086	cnot3b	90	92.417	Mola_mola
ENSPMGG00000022539	cnot3b	72	72.430	ENSMMOG00000016446	cnot3a	98	59.424	Mola_mola
ENSPMGG00000022539	cnot3b	60	83.099	ENSMODG00000004066	CNOT3	70	82.807	Monodelphis_domestica
ENSPMGG00000022539	cnot3b	99	59.844	ENSMALG00000009204	cnot3a	98	60.855	Monopterus_albus
ENSPMGG00000022539	cnot3b	78	93.562	ENSMALG00000004936	cnot3b	88	93.562	Monopterus_albus
ENSPMGG00000022539	cnot3b	80	80.268	MGP_CAROLIEiJ_G0029095	Cnot3	100	80.682	Mus_caroli
ENSPMGG00000022539	cnot3b	80	80.268	ENSMUSG00000035632	Cnot3	100	80.682	Mus_musculus
ENSPMGG00000022539	cnot3b	83	80.268	MGP_PahariEiJ_G0020964	Cnot3	100	80.682	Mus_pahari
ENSPMGG00000022539	cnot3b	80	80.268	MGP_SPRETEiJ_G0030148	Cnot3	100	80.682	Mus_spretus
ENSPMGG00000022539	cnot3b	65	79.933	ENSMPUG00000010352	CNOT3	70	82.807	Mustela_putorius_furo
ENSPMGG00000022539	cnot3b	63	83.099	ENSNGAG00000013266	Cnot3	70	82.807	Nannospalax_galili
ENSPMGG00000022539	cnot3b	76	94.222	ENSNBRG00000003336	cnot3b	91	95.074	Neolamprologus_brichardi
ENSPMGG00000022539	cnot3b	66	79.933	ENSNLEG00000006272	CNOT3	85	82.807	Nomascus_leucogenys
ENSPMGG00000022539	cnot3b	50	100.000	ENSOPRG00000001605	-	54	100.000	Ochotona_princeps
ENSPMGG00000022539	cnot3b	80	79.933	ENSODEG00000000705	CNOT3	100	89.873	Octodon_degus
ENSPMGG00000022539	cnot3b	99	59.417	ENSONIG00000006568	cnot3a	98	59.889	Oreochromis_niloticus
ENSPMGG00000022539	cnot3b	99	72.368	ENSONIG00000007047	cnot3b	98	70.646	Oreochromis_niloticus
ENSPMGG00000022539	cnot3b	66	79.016	ENSOCUG00000007691	CNOT3	70	82.807	Oryctolagus_cuniculus
ENSPMGG00000022539	cnot3b	99	67.111	ENSORLG00000005982	cnot3b	98	67.517	Oryzias_latipes
ENSPMGG00000022539	cnot3b	99	68.328	ENSORLG00020005779	cnot3b	98	67.742	Oryzias_latipes_hni
ENSPMGG00000022539	cnot3b	99	67.735	ENSORLG00015019021	cnot3b	98	68.000	Oryzias_latipes_hsok
ENSPMGG00000022539	cnot3b	80	88.346	ENSOMEG00000010309	cnot3a	94	88.346	Oryzias_melastigma
ENSPMGG00000022539	cnot3b	99	70.481	ENSOMEG00000015557	cnot3b	98	68.000	Oryzias_melastigma
ENSPMGG00000022539	cnot3b	80	79.933	ENSPPAG00000002748	CNOT3	72	82.807	Pan_paniscus
ENSPMGG00000022539	cnot3b	65	80.268	ENSPPRG00000011705	CNOT3	70	82.807	Panthera_pardus
ENSPMGG00000022539	cnot3b	68	78.502	ENSPTIG00000008781	CNOT3	81	88.889	Panthera_tigris_altaica
ENSPMGG00000022539	cnot3b	80	79.933	ENSPTRG00000046717	-	72	82.807	Pan_troglodytes
ENSPMGG00000022539	cnot3b	80	79.933	ENSPTRG00000011444	CNOT3	72	82.807	Pan_troglodytes
ENSPMGG00000022539	cnot3b	65	79.933	ENSPANG00000009375	CNOT3	70	82.807	Papio_anubis
ENSPMGG00000022539	cnot3b	66	93.925	ENSPKIG00000015967	-	92	88.745	Paramormyrops_kingsleyae
ENSPMGG00000022539	cnot3b	99	61.250	ENSPKIG00000011733	CNOT3	98	61.416	Paramormyrops_kingsleyae
ENSPMGG00000022539	cnot3b	64	82.746	ENSPCIG00000023018	CNOT3	89	87.500	Phascolarctos_cinereus
ENSPMGG00000022539	cnot3b	99	68.018	ENSPFOG00000007168	cnot3b	98	68.197	Poecilia_formosa
ENSPMGG00000022539	cnot3b	62	89.575	ENSPFOG00000008693	cnot3a	65	89.575	Poecilia_formosa
ENSPMGG00000022539	cnot3b	99	68.018	ENSPLAG00000013457	cnot3b	98	68.197	Poecilia_latipinna
ENSPMGG00000022539	cnot3b	99	68.018	ENSPMEG00000010184	cnot3b	98	68.197	Poecilia_mexicana
ENSPMGG00000022539	cnot3b	54	48.989	ENSPREG00000000766	-	92	56.757	Poecilia_reticulata
ENSPMGG00000022539	cnot3b	64	92.093	ENSPREG00000007592	cnot3a	94	86.441	Poecilia_reticulata
ENSPMGG00000022539	cnot3b	95	66.287	ENSPREG00000000662	cnot3b	93	67.391	Poecilia_reticulata
ENSPMGG00000022539	cnot3b	66	80.268	ENSPCOG00000017673	CNOT3	72	82.807	Propithecus_coquereli
ENSPMGG00000022539	cnot3b	65	79.599	ENSPVAG00000015564	CNOT3	67	82.105	Pteropus_vampyrus
ENSPMGG00000022539	cnot3b	55	48.750	ENSPNYG00000002282	cnot3a	98	60.994	Pundamilia_nyererei
ENSPMGG00000022539	cnot3b	99	67.687	ENSPNYG00000003358	cnot3b	98	65.984	Pundamilia_nyererei
ENSPMGG00000022539	cnot3b	70	92.202	ENSPNAG00000017679	cnot3a	83	91.364	Pygocentrus_nattereri
ENSPMGG00000022539	cnot3b	99	64.270	ENSPNAG00000027459	cnot3b	98	63.696	Pygocentrus_nattereri
ENSPMGG00000022539	cnot3b	83	80.268	ENSRNOG00000053234	Cnot3	70	83.158	Rattus_norvegicus
ENSPMGG00000022539	cnot3b	65	79.933	ENSRBIG00000031025	CNOT3	69	82.807	Rhinopithecus_bieti
ENSPMGG00000022539	cnot3b	66	79.933	ENSRROG00000003872	CNOT3	71	82.807	Rhinopithecus_roxellana
ENSPMGG00000022539	cnot3b	81	79.016	ENSSBOG00000030268	CNOT3	72	82.807	Saimiri_boliviensis_boliviensis
ENSPMGG00000022539	cnot3b	99	63.094	ENSSFOG00015019203	-	98	63.315	Scleropages_formosus
ENSPMGG00000022539	cnot3b	99	62.860	ENSSFOG00015000248	cnot3	98	62.611	Scleropages_formosus
ENSPMGG00000022539	cnot3b	99	69.066	ENSSMAG00000016031	cnot3b	98	68.501	Scophthalmus_maximus
ENSPMGG00000022539	cnot3b	99	69.840	ENSSDUG00000003428	cnot3b	98	70.690	Seriola_dumerili
ENSPMGG00000022539	cnot3b	59	93.925	ENSSDUG00000008181	cnot3a	97	85.950	Seriola_dumerili
ENSPMGG00000022539	cnot3b	99	69.947	ENSSLDG00000014376	cnot3b	98	70.797	Seriola_lalandi_dorsalis
ENSPMGG00000022539	cnot3b	68	74.260	ENSSPUG00000008510	CNOT3	73	82.807	Sphenodon_punctatus
ENSPMGG00000022539	cnot3b	99	59.375	ENSSPAG00000003858	cnot3a	96	60.092	Stegastes_partitus
ENSPMGG00000022539	cnot3b	99	70.856	ENSSPAG00000001429	cnot3b	98	71.506	Stegastes_partitus
ENSPMGG00000022539	cnot3b	65	79.933	ENSSSCG00000003264	CNOT3	70	82.807	Sus_scrofa
ENSPMGG00000022539	cnot3b	99	86.911	ENSTRUG00000007248	cnot3b	89	86.911	Takifugu_rubripes
ENSPMGG00000022539	cnot3b	98	59.529	ENSTNIG00000005663	cnot3b	98	65.811	Tetraodon_nigroviridis
ENSPMGG00000022539	cnot3b	65	80.268	ENSUAMG00000005234	CNOT3	70	83.158	Ursus_americanus
ENSPMGG00000022539	cnot3b	64	86.792	ENSUMAG00000010934	CNOT3	87	86.792	Ursus_maritimus
ENSPMGG00000022539	cnot3b	65	79.933	ENSVVUG00000008239	CNOT3	68	82.807	Vulpes_vulpes
ENSPMGG00000022539	cnot3b	68	74.922	ENSXETG00000003166	cnot3	68	88.550	Xenopus_tropicalis
ENSPMGG00000022539	cnot3b	72	76.978	ENSXCOG00000019460	cnot3a	88	92.523	Xiphophorus_couchianus
ENSPMGG00000022539	cnot3b	99	63.915	ENSXCOG00000018976	cnot3b	97	68.246	Xiphophorus_couchianus
ENSPMGG00000022539	cnot3b	99	67.432	ENSXMAG00000014176	cnot3b	98	67.939	Xiphophorus_maculatus