EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000022911 (Gene tree)
Gene ID: -
Gene Symbol: tnrc6c1
Alias: -
Full Name: trinucleotide repeat containing 6C1
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 8051 bases
Position: chrKN467870.1:140755-148805
Accession: ZDB-GENE-030131-7440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000028471	Ago_hook	PF10427.9	7.5e-08	1	1
ENSPMGP00000028474	RRM_1	PF00076.22	7.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000030320	-	756	-	ENSPMGP00000028474	251 (aa)	-	-
ENSPMGT00000030317	-	4335	-	ENSPMGP00000028471	1444 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000022911's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000022911's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000022911	tnrc6c1	97	63.265	ENSG00000078687	TNRC6C	100	53.448	Homo_sapiens
ENSPMGG00000022911	tnrc6c1	98	78.138	ENSAPOG00000019749	tnrc6c1	92	74.388	Acanthochromis_polyacanthus
ENSPMGG00000022911	tnrc6c1	97	63.265	ENSAMEG00000013756	TNRC6C	63	58.351	Ailuropoda_melanoleuca
ENSPMGG00000022911	tnrc6c1	98	76.906	ENSACIG00000008075	tnrc6c1	93	78.251	Amphilophus_citrinellus
ENSPMGG00000022911	tnrc6c1	98	79.757	ENSAOCG00000023968	tnrc6c1	93	74.775	Amphiprion_ocellaris
ENSPMGG00000022911	tnrc6c1	98	79.757	ENSAPEG00000009020	tnrc6c1	93	74.775	Amphiprion_percula
ENSPMGG00000022911	tnrc6c1	97	65.714	ENSAPLG00000005456	TNRC6C	59	58.613	Anas_platyrhynchos
ENSPMGG00000022911	tnrc6c1	97	64.898	ENSACAG00000016198	TNRC6C	58	58.985	Anolis_carolinensis
ENSPMGG00000022911	tnrc6c1	97	62.857	ENSANAG00000021554	TNRC6C	79	54.194	Aotus_nancymaae
ENSPMGG00000022911	tnrc6c1	98	78.715	ENSACLG00000000622	-	97	72.927	Astatotilapia_calliptera
ENSPMGG00000022911	tnrc6c1	98	78.458	ENSACLG00000000424	tnrc6c1	84	79.365	Astatotilapia_calliptera
ENSPMGG00000022911	tnrc6c1	97	64.082	ENSBTAG00000018658	TNRC6C	80	56.660	Bos_taurus
ENSPMGG00000022911	tnrc6c1	97	62.857	ENSCJAG00000019431	TNRC6C	79	53.978	Callithrix_jacchus
ENSPMGG00000022911	tnrc6c1	97	63.158	ENSCAFG00000005224	TNRC6C	64	57.692	Canis_familiaris
ENSPMGG00000022911	tnrc6c1	97	63.158	ENSCAFG00020006661	TNRC6C	65	54.762	Canis_lupus_dingo
ENSPMGG00000022911	tnrc6c1	97	64.082	ENSCHIG00000026004	TNRC6C	74	57.082	Capra_hircus
ENSPMGG00000022911	tnrc6c1	97	63.673	ENSTSYG00000005403	TNRC6C	66	58.351	Carlito_syrichta
ENSPMGG00000022911	tnrc6c1	97	56.680	ENSCAPG00000007307	TNRC6C	69	57.468	Cavia_aperea
ENSPMGG00000022911	tnrc6c1	97	62.753	ENSCPOG00000000467	TNRC6C	86	54.194	Cavia_porcellus
ENSPMGG00000022911	tnrc6c1	97	62.857	ENSCCAG00000030524	TNRC6C	80	57.294	Cebus_capucinus
ENSPMGG00000022911	tnrc6c1	97	62.857	ENSCATG00000033135	TNRC6C	79	54.194	Cercocebus_atys
ENSPMGG00000022911	tnrc6c1	97	63.158	ENSCLAG00000011139	TNRC6C	58	54.409	Chinchilla_lanigera
ENSPMGG00000022911	tnrc6c1	97	62.857	ENSCSAG00000005167	TNRC6C	66	57.505	Chlorocebus_sabaeus
ENSPMGG00000022911	tnrc6c1	97	64.898	ENSCPBG00000027960	TNRC6C	78	55.699	Chrysemys_picta_bellii
ENSPMGG00000022911	tnrc6c1	97	62.857	ENSCANG00000041771	TNRC6C	79	54.624	Colobus_angolensis_palliatus
ENSPMGG00000022911	tnrc6c1	97	63.968	ENSCGRG00001022686	Tnrc6c	62	56.550	Cricetulus_griseus_chok1gshd
ENSPMGG00000022911	tnrc6c1	97	63.968	ENSCGRG00000018041	Tnrc6c	62	56.550	Cricetulus_griseus_crigri
ENSPMGG00000022911	tnrc6c1	97	79.675	ENSCSEG00000012744	tnrc6c1	85	72.148	Cynoglossus_semilaevis
ENSPMGG00000022911	tnrc6c1	95	77.551	ENSDARG00000076847	tnrc6c1	84	69.313	Danio_rerio
ENSPMGG00000022911	tnrc6c1	96	64.876	ENSDNOG00000003247	TNRC6C	89	57.325	Dasypus_novemcinctus
ENSPMGG00000022911	tnrc6c1	97	62.449	ENSDORG00000004558	Tnrc6c	70	53.448	Dipodomys_ordii
ENSPMGG00000022911	tnrc6c1	97	61.885	ENSETEG00000005527	TNRC6C	76	51.957	Echinops_telfairi
ENSPMGG00000022911	tnrc6c1	97	63.265	ENSEASG00005004799	TNRC6C	87	54.721	Equus_asinus_asinus
ENSPMGG00000022911	tnrc6c1	97	63.265	ENSECAG00000012486	TNRC6C	87	57.717	Equus_caballus
ENSPMGG00000022911	tnrc6c1	97	45.714	ENSEEUG00000010008	TNRC6C	60	49.610	Erinaceus_europaeus
ENSPMGG00000022911	tnrc6c1	97	61.224	ENSFCAG00000028358	TNRC6C	65	53.978	Felis_catus
ENSPMGG00000022911	tnrc6c1	97	63.563	ENSFALG00000000848	TNRC6C	79	58.650	Ficedula_albicollis
ENSPMGG00000022911	tnrc6c1	97	63.158	ENSFDAG00000010368	TNRC6C	63	54.839	Fukomys_damarensis
ENSPMGG00000022911	tnrc6c1	98	78.947	ENSFHEG00000002936	tnrc6c1	93	73.529	Fundulus_heteroclitus
ENSPMGG00000022911	tnrc6c1	97	64.634	ENSGALG00000001725	TNRC6C	76	59.534	Gallus_gallus
ENSPMGG00000022911	tnrc6c1	98	78.800	ENSGAFG00000019019	tnrc6c1	67	73.695	Gambusia_affinis
ENSPMGG00000022911	tnrc6c1	98	78.776	ENSGACG00000012320	tnrc6c1	78	68.776	Gasterosteus_aculeatus
ENSPMGG00000022911	tnrc6c1	97	64.898	ENSGAGG00000022043	TNRC6C	69	55.388	Gopherus_agassizii
ENSPMGG00000022911	tnrc6c1	97	64.898	ENSGGOG00000011304	TNRC6C	74	57.806	Gorilla_gorilla
ENSPMGG00000022911	tnrc6c1	98	80.723	ENSHBUG00000010846	tnrc6c1	84	79.365	Haplochromis_burtoni
ENSPMGG00000022911	tnrc6c1	97	63.158	ENSHGLG00000004809	TNRC6C	58	54.624	Heterocephalus_glaber_female
ENSPMGG00000022911	tnrc6c1	97	61.134	ENSHGLG00100012597	TNRC6C	58	54.783	Heterocephalus_glaber_male
ENSPMGG00000022911	tnrc6c1	98	70.930	ENSIPUG00000000818	tnrc6c1	84	64.865	Ictalurus_punctatus
ENSPMGG00000022911	tnrc6c1	97	63.968	ENSSTOG00000009101	TNRC6C	75	54.409	Ictidomys_tridecemlineatus
ENSPMGG00000022911	tnrc6c1	97	62.753	ENSJJAG00000017055	Tnrc6c	58	54.409	Jaculus_jaculus
ENSPMGG00000022911	tnrc6c1	98	78.367	ENSKMAG00000021023	tnrc6c1	92	70.705	Kryptolebias_marmoratus
ENSPMGG00000022911	tnrc6c1	98	75.709	ENSLBEG00000007870	-	95	70.538	Labrus_bergylta
ENSPMGG00000022911	tnrc6c1	89	67.857	ENSLACG00000015283	TNRC6C	79	66.867	Latimeria_chalumnae
ENSPMGG00000022911	tnrc6c1	97	72.541	ENSLOCG00000013377	tnrc6c1	77	76.744	Lepisosteus_oculatus
ENSPMGG00000022911	tnrc6c1	98	74.118	ENSLAFG00000011122	TNRC6C	60	73.973	Loxodonta_africana
ENSPMGG00000022911	tnrc6c1	97	62.857	ENSMFAG00000043943	TNRC6C	79	54.194	Macaca_fascicularis
ENSPMGG00000022911	tnrc6c1	97	62.857	ENSMMUG00000011924	TNRC6C	79	54.194	Macaca_mulatta
ENSPMGG00000022911	tnrc6c1	97	62.857	ENSMNEG00000030405	TNRC6C	74	54.194	Macaca_nemestrina
ENSPMGG00000022911	tnrc6c1	97	62.857	ENSMLEG00000033436	TNRC6C	79	54.194	Mandrillus_leucophaeus
ENSPMGG00000022911	tnrc6c1	100	77.866	ENSMAMG00000023613	tnrc6c1	93	78.097	Mastacembelus_armatus
ENSPMGG00000022911	tnrc6c1	98	80.723	ENSMZEG00005010920	tnrc6c1	84	79.365	Maylandia_zebra
ENSPMGG00000022911	tnrc6c1	97	61.633	ENSMGAG00000003906	TNRC6C	56	47.068	Meleagris_gallopavo
ENSPMGG00000022911	tnrc6c1	97	63.968	ENSMAUG00000021618	Tnrc6c	65	55.269	Mesocricetus_auratus
ENSPMGG00000022911	tnrc6c1	97	60.656	ENSMICG00000003952	TNRC6C	66	57.928	Microcebus_murinus
ENSPMGG00000022911	tnrc6c1	97	63.968	ENSMOCG00000015879	Tnrc6c	63	55.054	Microtus_ochrogaster
ENSPMGG00000022911	tnrc6c1	97	79.424	ENSMMOG00000005203	tnrc6c1	92	69.593	Mola_mola
ENSPMGG00000022911	tnrc6c1	97	65.714	ENSMODG00000001785	TNRC6C	58	55.365	Monodelphis_domestica
ENSPMGG00000022911	tnrc6c1	97	63.968	MGP_CAROLIEiJ_G0017465	Tnrc6c	63	54.624	Mus_caroli
ENSPMGG00000022911	tnrc6c1	97	64.372	ENSMUSG00000025571	Tnrc6c	63	54.839	Mus_musculus
ENSPMGG00000022911	tnrc6c1	97	63.968	MGP_PahariEiJ_G0018593	Tnrc6c	63	54.839	Mus_pahari
ENSPMGG00000022911	tnrc6c1	97	63.968	MGP_SPRETEiJ_G0018309	Tnrc6c	63	54.409	Mus_spretus
ENSPMGG00000022911	tnrc6c1	98	62.602	ENSMPUG00000013348	TNRC6C	58	57.928	Mustela_putorius_furo
ENSPMGG00000022911	tnrc6c1	97	63.673	ENSMLUG00000014431	TNRC6C	58	53.079	Myotis_lucifugus
ENSPMGG00000022911	tnrc6c1	97	64.372	ENSNGAG00000012203	Tnrc6c	58	54.409	Nannospalax_galili
ENSPMGG00000022911	tnrc6c1	98	80.723	ENSNBRG00000005344	tnrc6c1	84	79.365	Neolamprologus_brichardi
ENSPMGG00000022911	tnrc6c1	97	62.449	ENSNLEG00000000047	TNRC6C	67	57.294	Nomascus_leucogenys
ENSPMGG00000022911	tnrc6c1	71	68.156	ENSMEUG00000005104	TNRC6C	60	52.685	Notamacropus_eugenii
ENSPMGG00000022911	tnrc6c1	97	62.857	ENSODEG00000012499	TNRC6C	65	54.194	Octodon_degus
ENSPMGG00000022911	tnrc6c1	98	80.723	ENSONIG00000002210	tnrc6c1	89	70.664	Oreochromis_niloticus
ENSPMGG00000022911	tnrc6c1	96	67.355	ENSOANG00000009758	-	52	55.699	Ornithorhynchus_anatinus
ENSPMGG00000022911	tnrc6c1	59	47.783	ENSOCUG00000006122	TNRC6C	73	50.521	Oryctolagus_cuniculus
ENSPMGG00000022911	tnrc6c1	96	77.959	ENSORLG00000009837	tnrc6c1	100	69.925	Oryzias_latipes
ENSPMGG00000022911	tnrc6c1	96	77.959	ENSORLG00020016510	tnrc6c1	93	71.008	Oryzias_latipes_hni
ENSPMGG00000022911	tnrc6c1	98	75.600	ENSOMEG00000000357	tnrc6c1	93	71.908	Oryzias_melastigma
ENSPMGG00000022911	tnrc6c1	97	62.041	ENSOGAG00000007197	TNRC6C	80	57.082	Otolemur_garnettii
ENSPMGG00000022911	tnrc6c1	71	65.193	ENSOARG00000006041	TNRC6C	63	58.145	Ovis_aries
ENSPMGG00000022911	tnrc6c1	97	63.265	ENSPPAG00000027160	TNRC6C	74	57.505	Pan_paniscus
ENSPMGG00000022911	tnrc6c1	97	61.224	ENSPPRG00000018881	TNRC6C	66	57.294	Panthera_pardus
ENSPMGG00000022911	tnrc6c1	98	37.361	ENSPTIG00000008791	TNRC6C	80	73.333	Panthera_tigris_altaica
ENSPMGG00000022911	tnrc6c1	97	63.265	ENSPTRG00000009699	TNRC6C	74	57.717	Pan_troglodytes
ENSPMGG00000022911	tnrc6c1	97	62.857	ENSPANG00000019994	TNRC6C	74	54.194	Papio_anubis
ENSPMGG00000022911	tnrc6c1	96	72.314	ENSPKIG00000005428	tnrc6c1	84	66.811	Paramormyrops_kingsleyae
ENSPMGG00000022911	tnrc6c1	97	58.367	ENSPKIG00000023304	-	95	54.618	Paramormyrops_kingsleyae
ENSPMGG00000022911	tnrc6c1	97	64.898	ENSPSIG00000018069	TNRC6C	63	55.484	Pelodiscus_sinensis
ENSPMGG00000022911	tnrc6c1	97	63.265	ENSPEMG00000009785	Tnrc6c	64	49.554	Peromyscus_maniculatus_bairdii
ENSPMGG00000022911	tnrc6c1	98	77.689	ENSPFOG00000012560	tnrc6c1	86	74.909	Poecilia_formosa
ENSPMGG00000022911	tnrc6c1	98	77.689	ENSPLAG00000021055	tnrc6c1	92	77.605	Poecilia_latipinna
ENSPMGG00000022911	tnrc6c1	97	62.857	ENSPPYG00000008679	TNRC6C	65	57.505	Pongo_abelii
ENSPMGG00000022911	tnrc6c1	96	64.050	ENSPCAG00000012510	TNRC6C	60	71.053	Procavia_capensis
ENSPMGG00000022911	tnrc6c1	97	63.265	ENSPCOG00000021451	TNRC6C	74	57.928	Propithecus_coquereli
ENSPMGG00000022911	tnrc6c1	67	63.559	ENSPVAG00000002008	TNRC6C	67	61.864	Pteropus_vampyrus
ENSPMGG00000022911	tnrc6c1	98	80.723	ENSPNYG00000014477	tnrc6c1	93	79.365	Pundamilia_nyererei
ENSPMGG00000022911	tnrc6c1	97	63.563	ENSRNOG00000022395	Tnrc6c	65	54.624	Rattus_norvegicus
ENSPMGG00000022911	tnrc6c1	97	62.857	ENSRBIG00000027777	TNRC6C	79	54.409	Rhinopithecus_bieti
ENSPMGG00000022911	tnrc6c1	97	62.857	ENSRROG00000042912	TNRC6C	79	54.409	Rhinopithecus_roxellana
ENSPMGG00000022911	tnrc6c1	97	62.857	ENSSBOG00000023981	TNRC6C	80	57.294	Saimiri_boliviensis_boliviensis
ENSPMGG00000022911	tnrc6c1	97	66.531	ENSSHAG00000018330	-	87	58.351	Sarcophilus_harrisii
ENSPMGG00000022911	tnrc6c1	98	58.314	ENSSFOG00015004735	-	99	61.478	Scleropages_formosus
ENSPMGG00000022911	tnrc6c1	98	69.796	ENSSFOG00015006475	tnrc6c1	80	76.744	Scleropages_formosus
ENSPMGG00000022911	tnrc6c1	98	79.184	ENSSMAG00000012761	tnrc6c1	93	69.231	Scophthalmus_maximus
ENSPMGG00000022911	tnrc6c1	98	80.816	ENSSDUG00000002366	tnrc6c1	93	71.795	Seriola_dumerili
ENSPMGG00000022911	tnrc6c1	98	80.000	ENSSLDG00000025613	tnrc6c1	93	71.581	Seriola_lalandi_dorsalis
ENSPMGG00000022911	tnrc6c1	68	62.185	ENSSARG00000006816	TNRC6C	72	61.345	Sorex_araneus
ENSPMGG00000022911	tnrc6c1	97	65.306	ENSSPUG00000007341	TNRC6C	69	58.140	Sphenodon_punctatus
ENSPMGG00000022911	tnrc6c1	87	76.364	ENSSPAG00000014977	tnrc6c1	90	74.449	Stegastes_partitus
ENSPMGG00000022911	tnrc6c1	97	64.082	ENSSSCG00000034373	TNRC6C	73	56.780	Sus_scrofa
ENSPMGG00000022911	tnrc6c1	97	63.563	ENSTGUG00000007733	TNRC6C	85	55.269	Taeniopygia_guttata
ENSPMGG00000022911	tnrc6c1	98	74.694	ENSTRUG00000011685	tnrc6c1	93	72.495	Takifugu_rubripes
ENSPMGG00000022911	tnrc6c1	98	76.327	ENSTNIG00000005273	tnrc6c1	93	70.199	Tetraodon_nigroviridis
ENSPMGG00000022911	tnrc6c1	60	48.289	ENSTBEG00000005046	TNRC6C	89	44.177	Tupaia_belangeri
ENSPMGG00000022911	tnrc6c1	97	64.490	ENSTTRG00000010828	TNRC6C	63	55.269	Tursiops_truncatus
ENSPMGG00000022911	tnrc6c1	97	63.265	ENSUAMG00000021223	-	94	62.374	Ursus_americanus
ENSPMGG00000022911	tnrc6c1	97	63.265	ENSUMAG00000013614	TNRC6C	59	58.140	Ursus_maritimus
ENSPMGG00000022911	tnrc6c1	97	63.158	ENSVVUG00000015268	TNRC6C	74	57.505	Vulpes_vulpes
ENSPMGG00000022911	tnrc6c1	97	64.490	ENSXETG00000019470	tnrc6c	73	55.437	Xenopus_tropicalis
ENSPMGG00000022911	tnrc6c1	98	80.000	ENSXMAG00000025971	tnrc6c1	93	68.710	Xiphophorus_maculatus