EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000023893 (Gene tree)
Gene ID: -
Gene Symbol: trnau1apa
Alias: -
Full Name: tRNA selenocysteine 1 associated protein 1a
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Minus strand
Length: 8841 bases
Position: chrKN467415.1:31667-40507
Accession: ZDB-GENE-050522-502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000029688	RRM_1	PF00076.22	2.7e-23	1	2
ENSPMGP00000029688	RRM_1	PF00076.22	2.7e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000031604	-	861	-	ENSPMGP00000029688	286 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000023893's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000023893's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000023893	trnau1apa	91	60.517	ENSG00000180098	TRNAU1AP	94	61.397	Homo_sapiens
ENSPMGG00000023893	trnau1apa	98	67.541	ENSAPOG00000007148	TRNAU1AP	99	69.932	Acanthochromis_polyacanthus
ENSPMGG00000023893	trnau1apa	91	60.517	ENSAMEG00000011367	TRNAU1AP	94	60.507	Ailuropoda_melanoleuca
ENSPMGG00000023893	trnau1apa	89	86.364	ENSACIG00000004161	trnau1apa	93	86.364	Amphilophus_citrinellus
ENSPMGG00000023893	trnau1apa	98	68.197	ENSAOCG00000008056	trnau1apa	99	69.836	Amphiprion_ocellaris
ENSPMGG00000023893	trnau1apa	98	68.197	ENSAPEG00000008868	trnau1apa	99	70.903	Amphiprion_percula
ENSPMGG00000023893	trnau1apa	98	66.987	ENSATEG00000012140	trnau1apa	99	68.269	Anabas_testudineus
ENSPMGG00000023893	trnau1apa	91	59.410	ENSAPLG00000002606	TRNAU1AP	98	60.294	Anas_platyrhynchos
ENSPMGG00000023893	trnau1apa	90	47.601	ENSACAG00000003995	-	94	48.897	Anolis_carolinensis
ENSPMGG00000023893	trnau1apa	67	39.801	ENSACAG00000004205	-	77	39.801	Anolis_carolinensis
ENSPMGG00000023893	trnau1apa	91	60.517	ENSANAG00000018976	TRNAU1AP	94	61.397	Aotus_nancymaae
ENSPMGG00000023893	trnau1apa	96	68.814	ENSACLG00000018515	trnau1apa	97	70.370	Astatotilapia_calliptera
ENSPMGG00000023893	trnau1apa	89	70.000	ENSAMXG00000029240	-	97	70.000	Astyanax_mexicanus
ENSPMGG00000023893	trnau1apa	96	50.853	ENSAMXG00000013750	trnau1apa	94	50.853	Astyanax_mexicanus
ENSPMGG00000023893	trnau1apa	91	60.148	ENSBTAG00000010393	TRNAU1AP	94	61.029	Bos_taurus
ENSPMGG00000023893	trnau1apa	91	60.517	ENSCJAG00000009717	TRNAU1AP	94	61.397	Callithrix_jacchus
ENSPMGG00000023893	trnau1apa	91	60.148	ENSCAFG00000011735	TRNAU1AP	94	61.397	Canis_familiaris
ENSPMGG00000023893	trnau1apa	91	60.148	ENSCAFG00020023584	TRNAU1AP	94	61.397	Canis_lupus_dingo
ENSPMGG00000023893	trnau1apa	91	60.148	ENSCHIG00000023215	TRNAU1AP	94	61.029	Capra_hircus
ENSPMGG00000023893	trnau1apa	91	61.194	ENSTSYG00000003506	TRNAU1AP	94	62.082	Carlito_syrichta
ENSPMGG00000023893	trnau1apa	91	60.148	ENSCPOG00000001925	TRNAU1AP	94	61.397	Cavia_porcellus
ENSPMGG00000023893	trnau1apa	91	60.517	ENSCCAG00000037506	TRNAU1AP	94	61.397	Cebus_capucinus
ENSPMGG00000023893	trnau1apa	91	60.517	ENSCATG00000044617	TRNAU1AP	94	61.397	Cercocebus_atys
ENSPMGG00000023893	trnau1apa	91	60.148	ENSCLAG00000008223	TRNAU1AP	94	61.397	Chinchilla_lanigera
ENSPMGG00000023893	trnau1apa	91	60.517	ENSCSAG00000001014	TRNAU1AP	94	61.397	Chlorocebus_sabaeus
ENSPMGG00000023893	trnau1apa	89	58.113	ENSCPBG00000000121	TRNAU1AP	96	59.925	Chrysemys_picta_bellii
ENSPMGG00000023893	trnau1apa	56	49.689	ENSCSAVG00000011781	-	85	49.689	Ciona_savignyi
ENSPMGG00000023893	trnau1apa	91	51.292	ENSCANG00000041949	TRNAU1AP	94	55.294	Colobus_angolensis_palliatus
ENSPMGG00000023893	trnau1apa	91	60.148	ENSCGRG00001004713	Trnau1ap	94	61.397	Cricetulus_griseus_chok1gshd
ENSPMGG00000023893	trnau1apa	91	60.148	ENSCGRG00000014532	Trnau1ap	94	61.397	Cricetulus_griseus_crigri
ENSPMGG00000023893	trnau1apa	96	68.667	ENSCSEG00000006663	trnau1apa	97	68.543	Cynoglossus_semilaevis
ENSPMGG00000023893	trnau1apa	99	66.343	ENSCVAG00000018069	trnau1apa	99	69.123	Cyprinodon_variegatus
ENSPMGG00000023893	trnau1apa	96	47.423	ENSDARG00000101323	trnau1apa	92	47.423	Danio_rerio
ENSPMGG00000023893	trnau1apa	91	60.517	ENSDNOG00000033009	TRNAU1AP	94	61.397	Dasypus_novemcinctus
ENSPMGG00000023893	trnau1apa	58	60.714	ENSDNOG00000047959	-	87	60.714	Dasypus_novemcinctus
ENSPMGG00000023893	trnau1apa	91	60.000	ENSDORG00000006349	Trnau1ap	97	63.274	Dipodomys_ordii
ENSPMGG00000023893	trnau1apa	92	33.639	FBgn0031607	CG15440	96	33.639	Drosophila_melanogaster
ENSPMGG00000023893	trnau1apa	78	58.120	ENSETEG00000012594	TRNAU1AP	95	59.149	Echinops_telfairi
ENSPMGG00000023893	trnau1apa	91	60.517	ENSEASG00005010062	TRNAU1AP	94	61.397	Equus_asinus_asinus
ENSPMGG00000023893	trnau1apa	91	60.517	ENSECAG00000012980	TRNAU1AP	94	61.397	Equus_caballus
ENSPMGG00000023893	trnau1apa	87	81.250	ENSELUG00000022790	-	93	81.250	Esox_lucius
ENSPMGG00000023893	trnau1apa	96	60.201	ENSELUG00000017686	trnau1apa	99	62.799	Esox_lucius
ENSPMGG00000023893	trnau1apa	91	60.517	ENSFCAG00000013401	TRNAU1AP	94	61.397	Felis_catus
ENSPMGG00000023893	trnau1apa	89	57.736	ENSFALG00000001371	TRNAU1AP	96	59.551	Ficedula_albicollis
ENSPMGG00000023893	trnau1apa	91	60.148	ENSFDAG00000018599	TRNAU1AP	94	61.397	Fukomys_damarensis
ENSPMGG00000023893	trnau1apa	77	71.545	ENSFHEG00000018232	trnau1apa	81	73.222	Fundulus_heteroclitus
ENSPMGG00000023893	trnau1apa	98	58.333	ENSGMOG00000016508	trnau1apa	99	59.672	Gadus_morhua
ENSPMGG00000023893	trnau1apa	91	57.778	ENSGALG00000001310	-	94	60.294	Gallus_gallus
ENSPMGG00000023893	trnau1apa	62	38.424	ENSGALG00000012721	C2H6orf52	86	37.768	Gallus_gallus
ENSPMGG00000023893	trnau1apa	78	71.488	ENSGAFG00000004928	trnau1apa	89	75.527	Gambusia_affinis
ENSPMGG00000023893	trnau1apa	98	66.118	ENSGACG00000001443	trnau1apa	99	68.092	Gasterosteus_aculeatus
ENSPMGG00000023893	trnau1apa	89	58.113	ENSGAGG00000004940	TRNAU1AP	96	59.925	Gopherus_agassizii
ENSPMGG00000023893	trnau1apa	91	60.517	ENSGGOG00000003511	TRNAU1AP	94	61.397	Gorilla_gorilla
ENSPMGG00000023893	trnau1apa	96	67.667	ENSHBUG00000002510	trnau1apa	97	69.205	Haplochromis_burtoni
ENSPMGG00000023893	trnau1apa	91	60.148	ENSHGLG00000010380	TRNAU1AP	94	61.397	Heterocephalus_glaber_female
ENSPMGG00000023893	trnau1apa	87	59.542	ENSHGLG00100012699	TRNAU1AP	92	60.837	Heterocephalus_glaber_male
ENSPMGG00000023893	trnau1apa	96	62.791	ENSHCOG00000014770	trnau1apa	97	62.791	Hippocampus_comes
ENSPMGG00000023893	trnau1apa	91	60.517	ENSSTOG00000000079	TRNAU1AP	94	61.397	Ictidomys_tridecemlineatus
ENSPMGG00000023893	trnau1apa	91	60.440	ENSJJAG00000010128	Trnau1ap	94	61.397	Jaculus_jaculus
ENSPMGG00000023893	trnau1apa	98	66.775	ENSKMAG00000001230	trnau1apa	97	68.000	Kryptolebias_marmoratus
ENSPMGG00000023893	trnau1apa	99	64.423	ENSLBEG00000011683	trnau1apa	97	67.763	Labrus_bergylta
ENSPMGG00000023893	trnau1apa	91	52.222	ENSLACG00000005541	TRNAU1AP	94	53.137	Latimeria_chalumnae
ENSPMGG00000023893	trnau1apa	90	61.172	ENSLOCG00000004041	trnau1apa	94	61.172	Lepisosteus_oculatus
ENSPMGG00000023893	trnau1apa	91	60.886	ENSLAFG00000007628	TRNAU1AP	94	61.765	Loxodonta_africana
ENSPMGG00000023893	trnau1apa	91	60.517	ENSMFAG00000043751	TRNAU1AP	94	61.397	Macaca_fascicularis
ENSPMGG00000023893	trnau1apa	91	60.517	ENSMMUG00000006561	TRNAU1AP	94	61.397	Macaca_mulatta
ENSPMGG00000023893	trnau1apa	91	60.517	ENSMNEG00000044201	TRNAU1AP	94	61.397	Macaca_nemestrina
ENSPMGG00000023893	trnau1apa	91	60.517	ENSMLEG00000015649	TRNAU1AP	94	61.397	Mandrillus_leucophaeus
ENSPMGG00000023893	trnau1apa	98	71.378	ENSMAMG00000001247	trnau1apa	99	72.792	Mastacembelus_armatus
ENSPMGG00000023893	trnau1apa	96	68.814	ENSMZEG00005017722	trnau1apa	97	70.370	Maylandia_zebra
ENSPMGG00000023893	trnau1apa	90	59.259	ENSMGAG00000002105	TRNAU1AP	96	60.148	Meleagris_gallopavo
ENSPMGG00000023893	trnau1apa	91	60.517	ENSMICG00000008386	TRNAU1AP	94	61.397	Microcebus_murinus
ENSPMGG00000023893	trnau1apa	91	60.148	ENSMOCG00000011189	Trnau1ap	94	61.397	Microtus_ochrogaster
ENSPMGG00000023893	trnau1apa	96	64.789	ENSMMOG00000012107	trnau1apa	96	65.263	Mola_mola
ENSPMGG00000023893	trnau1apa	91	59.410	ENSMODG00000010927	TRNAU1AP	94	59.058	Monodelphis_domestica
ENSPMGG00000023893	trnau1apa	98	66.316	ENSMALG00000016778	trnau1apa	97	70.000	Monopterus_albus
ENSPMGG00000023893	trnau1apa	91	60.517	MGP_CAROLIEiJ_G0026563	Trnau1ap	94	61.397	Mus_caroli
ENSPMGG00000023893	trnau1apa	91	60.517	ENSMUSG00000028898	Trnau1ap	94	61.397	Mus_musculus
ENSPMGG00000023893	trnau1apa	91	60.517	MGP_PahariEiJ_G0028896	Trnau1ap	84	74.576	Mus_pahari
ENSPMGG00000023893	trnau1apa	91	60.517	MGP_SPRETEiJ_G0027544	Trnau1ap	94	61.397	Mus_spretus
ENSPMGG00000023893	trnau1apa	91	60.517	ENSMPUG00000015511	TRNAU1AP	94	61.397	Mustela_putorius_furo
ENSPMGG00000023893	trnau1apa	91	60.517	ENSMLUG00000012586	TRNAU1AP	94	61.397	Myotis_lucifugus
ENSPMGG00000023893	trnau1apa	91	60.148	ENSNGAG00000015881	Trnau1ap	94	61.397	Nannospalax_galili
ENSPMGG00000023893	trnau1apa	98	66.780	ENSNBRG00000001758	trnau1apa	99	67.119	Neolamprologus_brichardi
ENSPMGG00000023893	trnau1apa	91	60.517	ENSNLEG00000009822	TRNAU1AP	94	61.710	Nomascus_leucogenys
ENSPMGG00000023893	trnau1apa	90	59.259	ENSMEUG00000006117	TRNAU1AP	96	58.909	Notamacropus_eugenii
ENSPMGG00000023893	trnau1apa	52	65.432	ENSOPRG00000007084	-	59	65.432	Ochotona_princeps
ENSPMGG00000023893	trnau1apa	91	60.148	ENSODEG00000002970	TRNAU1AP	94	61.397	Octodon_degus
ENSPMGG00000023893	trnau1apa	77	73.529	ENSONIG00000004715	trnau1apa	94	75.417	Oreochromis_niloticus
ENSPMGG00000023893	trnau1apa	91	47.985	ENSOANG00000005325	-	94	48.905	Ornithorhynchus_anatinus
ENSPMGG00000023893	trnau1apa	91	59.041	ENSOCUG00000011704	-	94	60.294	Oryctolagus_cuniculus
ENSPMGG00000023893	trnau1apa	81	45.161	ENSOCUG00000006834	-	94	45.161	Oryctolagus_cuniculus
ENSPMGG00000023893	trnau1apa	91	51.685	ENSOCUG00000002353	-	94	51.685	Oryctolagus_cuniculus
ENSPMGG00000023893	trnau1apa	98	69.097	ENSORLG00000010428	trnau1apa	99	69.097	Oryzias_latipes
ENSPMGG00000023893	trnau1apa	98	66.775	ENSORLG00020000926	trnau1ap	97	68.000	Oryzias_latipes_hni
ENSPMGG00000023893	trnau1apa	98	66.775	ENSORLG00015009858	trnau1ap	97	68.000	Oryzias_latipes_hsok
ENSPMGG00000023893	trnau1apa	96	68.896	ENSOMEG00000007873	trnau1apa	97	69.231	Oryzias_melastigma
ENSPMGG00000023893	trnau1apa	91	60.517	ENSOGAG00000002274	TRNAU1AP	94	61.397	Otolemur_garnettii
ENSPMGG00000023893	trnau1apa	91	60.148	ENSOARG00000002843	TRNAU1AP	94	61.029	Ovis_aries
ENSPMGG00000023893	trnau1apa	91	60.517	ENSPPAG00000033927	TRNAU1AP	94	61.397	Pan_paniscus
ENSPMGG00000023893	trnau1apa	91	60.517	ENSPPRG00000004416	TRNAU1AP	94	61.397	Panthera_pardus
ENSPMGG00000023893	trnau1apa	91	60.517	ENSPTIG00000016677	TRNAU1AP	94	61.397	Panthera_tigris_altaica
ENSPMGG00000023893	trnau1apa	85	57.551	ENSPTRG00000000434	-	91	57.787	Pan_troglodytes
ENSPMGG00000023893	trnau1apa	91	60.517	ENSPANG00000016019	TRNAU1AP	94	61.397	Papio_anubis
ENSPMGG00000023893	trnau1apa	87	81.250	ENSPKIG00000022205	-	94	81.250	Paramormyrops_kingsleyae
ENSPMGG00000023893	trnau1apa	90	54.839	ENSPKIG00000015511	trnau1apa	91	54.839	Paramormyrops_kingsleyae
ENSPMGG00000023893	trnau1apa	89	59.023	ENSPSIG00000006864	TRNAU1AP	96	59.925	Pelodiscus_sinensis
ENSPMGG00000023893	trnau1apa	91	60.517	ENSPEMG00000007877	Trnau1ap	94	61.765	Peromyscus_maniculatus_bairdii
ENSPMGG00000023893	trnau1apa	57	55.952	ENSPMAG00000000592	trnau1apa	92	55.952	Petromyzon_marinus
ENSPMGG00000023893	trnau1apa	73	52.315	ENSPMAG00000005934	trnau1apa	96	50.691	Petromyzon_marinus
ENSPMGG00000023893	trnau1apa	99	65.359	ENSPFOG00000008100	trnau1apa	97	68.439	Poecilia_formosa
ENSPMGG00000023893	trnau1apa	95	66.441	ENSPLAG00000010236	trnau1apa	99	68.350	Poecilia_latipinna
ENSPMGG00000023893	trnau1apa	96	69.395	ENSPMEG00000016387	trnau1apa	95	71.277	Poecilia_mexicana
ENSPMGG00000023893	trnau1apa	94	84.337	ENSPREG00000019821	trnau1apa	96	84.337	Poecilia_reticulata
ENSPMGG00000023893	trnau1apa	83	50.400	ENSPPYG00000001639	-	96	51.394	Pongo_abelii
ENSPMGG00000023893	trnau1apa	91	48.302	ENSPCOG00000023470	-	95	50.373	Propithecus_coquereli
ENSPMGG00000023893	trnau1apa	91	60.517	ENSPCOG00000027712	-	94	61.397	Propithecus_coquereli
ENSPMGG00000023893	trnau1apa	91	60.517	ENSPVAG00000017214	TRNAU1AP	94	61.397	Pteropus_vampyrus
ENSPMGG00000023893	trnau1apa	96	67.667	ENSPNYG00000010130	trnau1apa	95	73.171	Pundamilia_nyererei
ENSPMGG00000023893	trnau1apa	96	52.727	ENSPNAG00000024905	trnau1apa	94	52.727	Pygocentrus_nattereri
ENSPMGG00000023893	trnau1apa	87	55.556	ENSRNOG00000055344	Trnau1ap	88	56.870	Rattus_norvegicus
ENSPMGG00000023893	trnau1apa	91	60.517	ENSRBIG00000029083	TRNAU1AP	94	61.397	Rhinopithecus_bieti
ENSPMGG00000023893	trnau1apa	91	60.517	ENSRROG00000029128	TRNAU1AP	94	61.397	Rhinopithecus_roxellana
ENSPMGG00000023893	trnau1apa	91	60.517	ENSSBOG00000021299	TRNAU1AP	94	61.397	Saimiri_boliviensis_boliviensis
ENSPMGG00000023893	trnau1apa	91	59.410	ENSSHAG00000008108	TRNAU1AP	94	59.058	Sarcophilus_harrisii
ENSPMGG00000023893	trnau1apa	96	64.333	ENSSMAG00000020851	trnau1apa	97	67.327	Scophthalmus_maximus
ENSPMGG00000023893	trnau1apa	98	64.217	ENSSDUG00000011734	trnau1apa	97	67.213	Seriola_dumerili
ENSPMGG00000023893	trnau1apa	99	59.862	ENSSLDG00000012101	trnau1apa	99	59.722	Seriola_lalandi_dorsalis
ENSPMGG00000023893	trnau1apa	90	60.370	ENSSARG00000007536	TRNAU1AP	96	61.624	Sorex_araneus
ENSPMGG00000023893	trnau1apa	91	56.089	ENSSPUG00000010400	-	94	56.985	Sphenodon_punctatus
ENSPMGG00000023893	trnau1apa	55	50.588	ENSSPUG00000010415	-	95	50.588	Sphenodon_punctatus
ENSPMGG00000023893	trnau1apa	98	68.506	ENSSPAG00000005029	trnau1apa	99	70.261	Stegastes_partitus
ENSPMGG00000023893	trnau1apa	93	59.206	ENSSSCG00000030284	TRNAU1AP	94	61.397	Sus_scrofa
ENSPMGG00000023893	trnau1apa	61	43.784	ENSTGUG00000005908	-	95	43.784	Taeniopygia_guttata
ENSPMGG00000023893	trnau1apa	90	59.480	ENSTGUG00000000735	-	96	60.517	Taeniopygia_guttata
ENSPMGG00000023893	trnau1apa	96	68.475	ENSTRUG00000003352	trnau1apa	97	68.475	Takifugu_rubripes
ENSPMGG00000023893	trnau1apa	96	65.101	ENSTNIG00000006129	trnau1apa	97	66.216	Tetraodon_nigroviridis
ENSPMGG00000023893	trnau1apa	78	50.000	ENSTBEG00000008049	-	95	54.468	Tupaia_belangeri
ENSPMGG00000023893	trnau1apa	91	60.517	ENSTTRG00000001854	TRNAU1AP	94	61.397	Tursiops_truncatus
ENSPMGG00000023893	trnau1apa	89	59.774	ENSUAMG00000008789	TRNAU1AP	96	61.049	Ursus_americanus
ENSPMGG00000023893	trnau1apa	91	60.148	ENSUMAG00000011068	TRNAU1AP	94	60.145	Ursus_maritimus
ENSPMGG00000023893	trnau1apa	78	59.402	ENSVPAG00000006778	TRNAU1AP	80	60.426	Vicugna_pacos
ENSPMGG00000023893	trnau1apa	92	59.928	ENSVVUG00000012518	TRNAU1AP	90	60.791	Vulpes_vulpes
ENSPMGG00000023893	trnau1apa	99	65.686	ENSXMAG00000017361	trnau1apa	97	68.771	Xiphophorus_maculatus