EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMGG00000023909 (Gene tree)
Gene ID: -
Gene Symbol: vars
Alias: -
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Periophthalmus_magnuspinnatus
Status: putative
Strand: Plus strand
Length: 40334 bases
Position: chrKN460837.1:85536-125869
Accession: ZDB-GENE-010601-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMGP00000029704	tRNA-synt_1g	PF09334.11	8e-13	1	1
ENSPMGP00000029704	Anticodon_1	PF08264.13	8.8e-35	1	1
ENSPMGP00000029704	tRNA-synt_1	PF00133.22	6.3e-208	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMGT00000031622	-	3702	-	ENSPMGP00000029704	1233 (aa)	-	-

Gene Model

Click here to download ENSPMGG00000023909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMGG00000023909's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMGG00000023909	vars	100	65.485	ENSG00000204394	VARS	99	72.086	Homo_sapiens
ENSPMGG00000023909	vars	98	84.660	ENSAPOG00000020691	vars	99	84.464	Acanthochromis_polyacanthus
ENSPMGG00000023909	vars	98	84.660	ENSAPOG00000020921	vars	99	84.464	Acanthochromis_polyacanthus
ENSPMGG00000023909	vars	100	65.669	ENSAMEG00000006417	VARS	100	65.591	Ailuropoda_melanoleuca
ENSPMGG00000023909	vars	100	85.771	ENSACIG00000013752	vars	100	85.771	Amphilophus_citrinellus
ENSPMGG00000023909	vars	100	85.289	ENSAOCG00000002447	vars	100	85.096	Amphiprion_ocellaris
ENSPMGG00000023909	vars	100	84.827	ENSAPEG00000010638	vars	99	84.827	Amphiprion_percula
ENSPMGG00000023909	vars	100	84.763	ENSATEG00000020219	vars	100	84.683	Anabas_testudineus
ENSPMGG00000023909	vars	90	68.745	ENSACAG00000029133	-	99	70.768	Anolis_carolinensis
ENSPMGG00000023909	vars	100	65.852	ENSANAG00000015453	VARS	100	66.009	Aotus_nancymaae
ENSPMGG00000023909	vars	100	83.542	ENSACLG00000025699	vars	97	83.542	Astatotilapia_calliptera
ENSPMGG00000023909	vars	96	82.532	ENSAMXG00000017716	vars	96	82.532	Astyanax_mexicanus
ENSPMGG00000023909	vars	100	66.088	ENSBTAG00000005631	VARS	100	66.246	Bos_taurus
ENSPMGG00000023909	vars	100	65.248	ENSCJAG00000002604	VARS	100	65.406	Callithrix_jacchus
ENSPMGG00000023909	vars	100	65.485	ENSCAFG00000000636	VARS	100	65.406	Canis_familiaris
ENSPMGG00000023909	vars	94	66.947	ENSCAFG00020020790	VARS	96	66.863	Canis_lupus_dingo
ENSPMGG00000023909	vars	100	66.088	ENSCHIG00000011008	VARS	100	66.246	Capra_hircus
ENSPMGG00000023909	vars	100	65.931	ENSTSYG00000001567	VARS	100	66.088	Carlito_syrichta
ENSPMGG00000023909	vars	91	68.947	ENSCAPG00000013736	VARS	98	68.596	Cavia_aperea
ENSPMGG00000023909	vars	100	65.615	ENSCPOG00000000870	VARS	100	65.379	Cavia_porcellus
ENSPMGG00000023909	vars	100	65.642	ENSCCAG00000035656	VARS	100	65.563	Cebus_capucinus
ENSPMGG00000023909	vars	100	65.721	ENSCATG00000022394	VARS	100	65.642	Cercocebus_atys
ENSPMGG00000023909	vars	89	67.393	ENSCLAG00000009470	VARS	92	66.957	Chinchilla_lanigera
ENSPMGG00000023909	vars	100	65.485	ENSCSAG00000008784	VARS	100	65.406	Chlorocebus_sabaeus
ENSPMGG00000023909	vars	79	74.743	ENSCPBG00000007943	VARS	96	74.590	Chrysemys_picta_bellii
ENSPMGG00000023909	vars	100	65.642	ENSCANG00000033570	VARS	100	65.563	Colobus_angolensis_palliatus
ENSPMGG00000023909	vars	100	66.036	ENSCGRG00001005686	Vars	100	66.194	Cricetulus_griseus_chok1gshd
ENSPMGG00000023909	vars	93	64.220	ENSCGRG00000013352	Vars	78	64.387	Cricetulus_griseus_crigri
ENSPMGG00000023909	vars	100	83.119	ENSCSEG00000019652	vars	100	83.119	Cynoglossus_semilaevis
ENSPMGG00000023909	vars	100	84.483	ENSCVAG00000022398	vars	100	84.718	Cyprinodon_variegatus
ENSPMGG00000023909	vars	100	81.476	ENSDARG00000044575	vars	100	81.790	Danio_rerio
ENSPMGG00000023909	vars	83	71.141	ENSDORG00000016433	Vars	93	71.237	Dipodomys_ordii
ENSPMGG00000023909	vars	68	75.182	ENSETEG00000003824	VARS	76	75.182	Echinops_telfairi
ENSPMGG00000023909	vars	53	72.775	ENSEBUG00000007086	vars	83	72.775	Eptatretus_burgeri
ENSPMGG00000023909	vars	59	65.021	ENSEBUG00000004637	vars	100	65.021	Eptatretus_burgeri
ENSPMGG00000023909	vars	100	65.694	ENSEASG00005015673	VARS	100	65.852	Equus_asinus_asinus
ENSPMGG00000023909	vars	100	65.721	ENSECAG00000014620	VARS	100	65.879	Equus_caballus
ENSPMGG00000023909	vars	71	70.927	ENSEEUG00000004116	VARS	73	70.927	Erinaceus_europaeus
ENSPMGG00000023909	vars	100	81.265	ENSELUG00000006550	vars	97	81.187	Esox_lucius
ENSPMGG00000023909	vars	100	65.485	ENSFCAG00000004510	VARS	100	65.485	Felis_catus
ENSPMGG00000023909	vars	83	71.746	ENSFDAG00000011401	VARS	100	71.241	Fukomys_damarensis
ENSPMGG00000023909	vars	100	83.777	ENSFHEG00000010672	vars	100	84.091	Fundulus_heteroclitus
ENSPMGG00000023909	vars	100	78.020	ENSGMOG00000014908	vars	100	78.176	Gadus_morhua
ENSPMGG00000023909	vars	100	84.066	ENSGAFG00000021630	vars	100	84.301	Gambusia_affinis
ENSPMGG00000023909	vars	93	84.861	ENSGACG00000009601	vars	100	81.020	Gasterosteus_aculeatus
ENSPMGG00000023909	vars	100	65.800	ENSGGOG00000011364	VARS	100	65.721	Gorilla_gorilla
ENSPMGG00000023909	vars	100	83.621	ENSHBUG00000017151	vars	97	83.621	Haplochromis_burtoni
ENSPMGG00000023909	vars	100	65.509	ENSHGLG00000011646	VARS	100	65.509	Heterocephalus_glaber_female
ENSPMGG00000023909	vars	94	62.333	ENSHGLG00100018062	VARS	99	62.333	Heterocephalus_glaber_male
ENSPMGG00000023909	vars	99	81.947	ENSHCOG00000012198	vars	99	81.975	Hippocampus_comes
ENSPMGG00000023909	vars	100	81.386	ENSIPUG00000005218	vars	100	81.386	Ictalurus_punctatus
ENSPMGG00000023909	vars	100	65.442	ENSSTOG00000013112	VARS	100	65.520	Ictidomys_tridecemlineatus
ENSPMGG00000023909	vars	100	53.217	ENSJJAG00000015343	-	100	53.137	Jaculus_jaculus
ENSPMGG00000023909	vars	100	65.457	ENSJJAG00000019749	-	100	65.087	Jaculus_jaculus
ENSPMGG00000023909	vars	100	83.240	ENSKMAG00000009455	vars	100	83.320	Kryptolebias_marmoratus
ENSPMGG00000023909	vars	100	84.597	ENSLBEG00000010341	vars	100	84.597	Labrus_bergylta
ENSPMGG00000023909	vars	94	63.934	ENSLACG00000015232	VARS	99	65.574	Latimeria_chalumnae
ENSPMGG00000023909	vars	100	73.817	ENSLOCG00000004240	vars	100	73.896	Lepisosteus_oculatus
ENSPMGG00000023909	vars	100	65.193	ENSLAFG00000023090	VARS	100	65.272	Loxodonta_africana
ENSPMGG00000023909	vars	100	65.563	ENSMFAG00000001032	VARS	100	65.485	Macaca_fascicularis
ENSPMGG00000023909	vars	100	65.563	ENSMMUG00000006828	VARS	100	65.485	Macaca_mulatta
ENSPMGG00000023909	vars	100	65.563	ENSMNEG00000042072	VARS	100	65.485	Macaca_nemestrina
ENSPMGG00000023909	vars	100	65.642	ENSMLEG00000039307	VARS	100	65.563	Mandrillus_leucophaeus
ENSPMGG00000023909	vars	100	84.882	ENSMAMG00000003949	vars	100	85.039	Mastacembelus_armatus
ENSPMGG00000023909	vars	100	83.621	ENSMZEG00005018327	vars	100	83.535	Maylandia_zebra
ENSPMGG00000023909	vars	100	65.615	ENSMAUG00000006715	Vars	100	65.773	Mesocricetus_auratus
ENSPMGG00000023909	vars	100	66.246	ENSMICG00000003548	VARS	100	65.931	Microcebus_murinus
ENSPMGG00000023909	vars	100	65.028	ENSMOCG00000015404	Vars	100	65.266	Microtus_ochrogaster
ENSPMGG00000023909	vars	100	83.734	ENSMMOG00000015801	vars	100	83.654	Mola_mola
ENSPMGG00000023909	vars	100	65.773	ENSMODG00000015204	-	100	65.852	Monodelphis_domestica
ENSPMGG00000023909	vars	99	83.516	ENSMALG00000022532	vars	99	83.516	Monopterus_albus
ENSPMGG00000023909	vars	100	65.904	MGP_CAROLIEiJ_G0021491	Vars	100	65.983	Mus_caroli
ENSPMGG00000023909	vars	100	65.746	ENSMUSG00000007029	Vars	100	65.825	Mus_musculus
ENSPMGG00000023909	vars	100	65.904	MGP_PahariEiJ_G0020486	Vars	100	65.904	Mus_pahari
ENSPMGG00000023909	vars	100	65.825	MGP_SPRETEiJ_G0022396	Vars	100	65.904	Mus_spretus
ENSPMGG00000023909	vars	100	65.957	ENSMPUG00000010821	VARS	100	65.879	Mustela_putorius_furo
ENSPMGG00000023909	vars	77	68.826	ENSMLUG00000013126	VARS	100	69.130	Myotis_lucifugus
ENSPMGG00000023909	vars	100	65.563	ENSNGAG00000012151	Vars	100	65.721	Nannospalax_galili
ENSPMGG00000023909	vars	100	84.826	ENSNBRG00000020520	vars	100	84.826	Neolamprologus_brichardi
ENSPMGG00000023909	vars	100	65.485	ENSNLEG00000006351	VARS	100	65.642	Nomascus_leucogenys
ENSPMGG00000023909	vars	100	63.187	ENSMEUG00000011378	VARS	100	62.986	Notamacropus_eugenii
ENSPMGG00000023909	vars	100	65.694	ENSOPRG00000003607	VARS	100	65.852	Ochotona_princeps
ENSPMGG00000023909	vars	100	65.427	ENSODEG00000017681	VARS	100	65.561	Octodon_degus
ENSPMGG00000023909	vars	100	84.530	ENSONIG00000013064	vars	100	85.279	Oreochromis_niloticus
ENSPMGG00000023909	vars	77	69.231	ENSOANG00000005400	VARS	98	69.351	Ornithorhynchus_anatinus
ENSPMGG00000023909	vars	100	64.246	ENSOCUG00000022463	VARS	100	63.856	Oryctolagus_cuniculus
ENSPMGG00000023909	vars	100	82.568	ENSORLG00000013063	vars	100	82.555	Oryzias_latipes
ENSPMGG00000023909	vars	100	83.034	ENSORLG00020003504	vars	100	83.020	Oryzias_latipes_hni
ENSPMGG00000023909	vars	100	83.099	ENSORLG00015009001	vars	100	83.164	Oryzias_latipes_hsok
ENSPMGG00000023909	vars	100	83.085	ENSOMEG00000015016	vars	100	83.320	Oryzias_melastigma
ENSPMGG00000023909	vars	100	65.406	ENSOGAG00000007515	VARS	100	65.406	Otolemur_garnettii
ENSPMGG00000023909	vars	100	65.642	ENSPPAG00000034012	VARS	100	65.800	Pan_paniscus
ENSPMGG00000023909	vars	100	65.642	ENSPPRG00000014855	VARS	100	65.642	Panthera_pardus
ENSPMGG00000023909	vars	85	70.195	ENSPTIG00000010462	VARS	94	69.834	Panthera_tigris_altaica
ENSPMGG00000023909	vars	100	65.642	ENSPTRG00000017985	VARS	100	65.800	Pan_troglodytes
ENSPMGG00000023909	vars	100	64.056	ENSPANG00000014565	VARS	100	63.978	Papio_anubis
ENSPMGG00000023909	vars	100	78.349	ENSPKIG00000016304	vars	100	78.115	Paramormyrops_kingsleyae
ENSPMGG00000023909	vars	100	65.379	ENSPEMG00000006639	Vars	100	65.536	Peromyscus_maniculatus_bairdii
ENSPMGG00000023909	vars	100	65.142	ENSPCIG00000018553	VARS	100	65.300	Phascolarctos_cinereus
ENSPMGG00000023909	vars	100	83.987	ENSPFOG00000015690	vars	100	84.223	Poecilia_formosa
ENSPMGG00000023909	vars	100	85.108	ENSPLAG00000009590	vars	100	84.868	Poecilia_latipinna
ENSPMGG00000023909	vars	100	83.909	ENSPMEG00000004708	vars	100	84.144	Poecilia_mexicana
ENSPMGG00000023909	vars	100	82.970	ENSPREG00000013264	vars	100	82.781	Poecilia_reticulata
ENSPMGG00000023909	vars	100	63.909	ENSPPYG00000016460	VARS	100	64.066	Pongo_abelii
ENSPMGG00000023909	vars	85	65.419	ENSPCAG00000013565	VARS	86	65.419	Procavia_capensis
ENSPMGG00000023909	vars	100	65.800	ENSPCOG00000010942	VARS	100	65.957	Propithecus_coquereli
ENSPMGG00000023909	vars	100	64.038	ENSPVAG00000012403	VARS	100	63.722	Pteropus_vampyrus
ENSPMGG00000023909	vars	100	83.699	ENSPNYG00000022511	vars	100	83.699	Pundamilia_nyererei
ENSPMGG00000023909	vars	100	81.676	ENSPNAG00000020962	vars	100	81.676	Pygocentrus_nattereri
ENSPMGG00000023909	vars	100	65.457	ENSRNOG00000000867	Vars	100	65.379	Rattus_norvegicus
ENSPMGG00000023909	vars	100	65.563	ENSRBIG00000041669	VARS	100	65.485	Rhinopithecus_bieti
ENSPMGG00000023909	vars	100	65.563	ENSRROG00000045490	VARS	100	65.485	Rhinopithecus_roxellana
ENSPMGG00000023909	vars	100	65.327	ENSSBOG00000035402	VARS	100	65.485	Saimiri_boliviensis_boliviensis
ENSPMGG00000023909	vars	100	64.336	ENSSHAG00000006937	VARS	100	64.425	Sarcophilus_harrisii
ENSPMGG00000023909	vars	100	78.098	ENSSFOG00015014272	vars	100	78.098	Scleropages_formosus
ENSPMGG00000023909	vars	100	83.242	ENSSMAG00000009596	vars	99	83.242	Scophthalmus_maximus
ENSPMGG00000023909	vars	100	85.356	ENSSDUG00000014177	vars	100	85.356	Seriola_dumerili
ENSPMGG00000023909	vars	100	85.121	ENSSLDG00000025316	vars	100	85.121	Seriola_lalandi_dorsalis
ENSPMGG00000023909	vars	100	84.748	ENSSPAG00000017068	vars	100	84.748	Stegastes_partitus
ENSPMGG00000023909	vars	100	65.485	ENSSSCG00000038950	VARS	100	65.642	Sus_scrofa
ENSPMGG00000023909	vars	81	79.941	ENSTRUG00000012307	vars	97	79.922	Takifugu_rubripes
ENSPMGG00000023909	vars	100	83.135	ENSTNIG00000008011	vars	100	83.135	Tetraodon_nigroviridis
ENSPMGG00000023909	vars	100	59.700	ENSTTRG00000014128	VARS	100	59.700	Tursiops_truncatus
ENSPMGG00000023909	vars	100	63.765	ENSUAMG00000010424	VARS	100	63.686	Ursus_americanus
ENSPMGG00000023909	vars	100	60.156	ENSUMAG00000013486	VARS	100	60.156	Ursus_maritimus
ENSPMGG00000023909	vars	100	65.748	ENSVVUG00000021323	VARS	100	65.433	Vulpes_vulpes
ENSPMGG00000023909	vars	100	63.852	ENSXETG00000024076	vars	100	63.931	Xenopus_tropicalis
ENSPMGG00000023909	vars	100	84.265	ENSXCOG00000019172	vars	100	84.505	Xiphophorus_couchianus
ENSPMGG00000023909	vars	100	83.752	ENSXMAG00000010927	vars	100	83.987	Xiphophorus_maculatus