EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000000098 (Gene tree)
Gene ID: 108414217
Gene Symbol: arf1
Alias: wu:fb33e02|wu:fb78h01
Full Name: ADP ribosylation factor 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 4721 bases
Position: chrKV576729.1:93265-97985
Accession: 108414217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000000113	MMR_HSR1	PF01926.23	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000014396	-	546	XM_017687037	ENSPNAP00000000113	181 (aa)	XP_017542526	-

Gene Model

Click here to download ENSPNAG00000000098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000000098's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000000098	arf1	99	44.134	ENSPNAG00000014755	zgc:110197	97	45.783
ENSPNAG00000000098	arf1	93	97.633	ENSPNAG00000016262	arf2a	93	97.633
ENSPNAG00000000098	arf1	92	40.351	ENSPNAG00000024137	ARL6	92	40.351
ENSPNAG00000000098	arf1	91	45.294	ENSPNAG00000007188	ARL4D	80	45.294
ENSPNAG00000000098	arf1	83	31.447	ENSPNAG00000009983	srprb	58	31.447
ENSPNAG00000000098	arf1	91	40.606	ENSPNAG00000025213	arl11	94	40.606
ENSPNAG00000000098	arf1	93	31.176	ENSPNAG00000017354	arl8bb	91	31.176
ENSPNAG00000000098	arf1	93	97.633	ENSPNAG00000009407	arf3b	93	97.633
ENSPNAG00000000098	arf1	95	45.349	ENSPNAG00000013238	arl3l1	92	45.349
ENSPNAG00000000098	arf1	92	43.787	ENSPNAG00000022337	-	89	43.787
ENSPNAG00000000098	arf1	96	46.857	ENSPNAG00000019262	arl2	95	46.857
ENSPNAG00000000098	arf1	93	98.225	ENSPNAG00000006183	arf2b	93	98.225
ENSPNAG00000000098	arf1	92	70.482	ENSPNAG00000004475	-	92	70.482
ENSPNAG00000000098	arf1	93	85.714	ENSPNAG00000004745	arf4a	93	85.714
ENSPNAG00000000098	arf1	93	50.595	ENSPNAG00000002310	arl5c	94	50.595
ENSPNAG00000000098	arf1	87	46.951	ENSPNAG00000028458	arl4cb	85	46.951
ENSPNAG00000000098	arf1	93	97.633	ENSPNAG00000003824	arf3a	93	97.633
ENSPNAG00000000098	arf1	92	50.602	ENSPNAG00000018102	arl5a	93	50.602
ENSPNAG00000000098	arf1	88	59.375	ENSPNAG00000028795	arl1	96	59.375
ENSPNAG00000000098	arf1	93	32.353	ENSPNAG00000007931	arl8ba	91	32.353
ENSPNAG00000000098	arf1	93	86.905	ENSPNAG00000024427	-	93	86.905
ENSPNAG00000000098	arf1	92	77.108	ENSPNAG00000005054	-	92	77.108
ENSPNAG00000000098	arf1	90	46.914	ENSPNAG00000004165	-	93	46.914
ENSPNAG00000000098	arf1	89	34.483	ENSPNAG00000003438	arfrp1	85	34.483
ENSPNAG00000000098	arf1	99	45.251	ENSPNAG00000010083	arl3l2	97	45.251
ENSPNAG00000000098	arf1	96	43.333	ENSPNAG00000009887	arl4ab	91	43.333
ENSPNAG00000000098	arf1	99	43.575	ENSPNAG00000027037	arl3	97	45.181

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000000098	arf1	93	95.858	ENSACIG00000012192	-	94	95.858	Amphilophus_citrinellus
ENSPNAG00000000098	arf1	77	95.714	ENSAOCG00000001275	-	82	95.714	Amphiprion_ocellaris
ENSPNAG00000000098	arf1	93	95.266	ENSAPEG00000016909	-	94	95.266	Amphiprion_percula
ENSPNAG00000000098	arf1	93	95.858	ENSATEG00000003174	-	94	95.858	Anabas_testudineus
ENSPNAG00000000098	arf1	93	94.675	ENSACLG00000004123	-	94	94.675	Astatotilapia_calliptera
ENSPNAG00000000098	arf1	95	98.837	ENSAMXG00000019845	arf1	96	98.837	Astyanax_mexicanus
ENSPNAG00000000098	arf1	93	95.266	ENSCVAG00000013374	-	94	95.266	Cyprinodon_variegatus
ENSPNAG00000000098	arf1	95	98.256	ENSDARG00000009484	arf1	96	98.256	Danio_rerio
ENSPNAG00000000098	arf1	94	100.000	ENSELUG00000022533	arf1	75	100.000	Esox_lucius
ENSPNAG00000000098	arf1	93	95.266	ENSFHEG00000005859	-	94	95.266	Fundulus_heteroclitus
ENSPNAG00000000098	arf1	92	91.617	ENSGMOG00000000429	arf1	91	91.617	Gadus_morhua
ENSPNAG00000000098	arf1	93	95.266	ENSGAFG00000018151	-	94	95.266	Gambusia_affinis
ENSPNAG00000000098	arf1	93	88.166	ENSGACG00000014195	-	91	88.166	Gasterosteus_aculeatus
ENSPNAG00000000098	arf1	93	94.675	ENSHBUG00000002636	-	94	94.675	Haplochromis_burtoni
ENSPNAG00000000098	arf1	95	97.674	ENSIPUG00000006311	arf1	96	97.674	Ictalurus_punctatus
ENSPNAG00000000098	arf1	93	95.266	ENSKMAG00000018315	-	94	95.266	Kryptolebias_marmoratus
ENSPNAG00000000098	arf1	93	91.716	ENSLBEG00000023263	-	93	91.716	Labrus_bergylta
ENSPNAG00000000098	arf1	92	93.373	ENSLBEG00000001998	arf1	94	93.373	Labrus_bergylta
ENSPNAG00000000098	arf1	93	95.266	ENSMAMG00000001553	-	94	95.266	Mastacembelus_armatus
ENSPNAG00000000098	arf1	93	94.675	ENSMZEG00005022594	-	94	94.675	Maylandia_zebra
ENSPNAG00000000098	arf1	93	96.450	ENSMALG00000004269	-	94	96.450	Monopterus_albus
ENSPNAG00000000098	arf1	98	91.011	ENSNBRG00000016455	-	98	91.011	Neolamprologus_brichardi
ENSPNAG00000000098	arf1	93	94.675	ENSONIG00000001286	-	94	94.675	Oreochromis_niloticus
ENSPNAG00000000098	arf1	93	96.450	ENSORLG00000023270	-	94	96.450	Oryzias_latipes
ENSPNAG00000000098	arf1	93	95.858	ENSORLG00020006712	-	94	95.858	Oryzias_latipes_hni
ENSPNAG00000000098	arf1	93	96.450	ENSORLG00015019836	-	94	96.450	Oryzias_latipes_hsok
ENSPNAG00000000098	arf1	93	96.450	ENSOMEG00000023784	-	94	96.450	Oryzias_melastigma
ENSPNAG00000000098	arf1	93	92.899	ENSPMGG00000014174	arf1	98	92.899	Periophthalmus_magnuspinnatus
ENSPNAG00000000098	arf1	93	98.225	ENSPMAG00000002035	arf1	94	98.225	Petromyzon_marinus
ENSPNAG00000000098	arf1	93	95.266	ENSPFOG00000014787	-	94	95.266	Poecilia_formosa
ENSPNAG00000000098	arf1	93	95.266	ENSPLAG00000001041	-	94	95.266	Poecilia_latipinna
ENSPNAG00000000098	arf1	93	95.266	ENSPMEG00000024077	-	94	95.266	Poecilia_mexicana
ENSPNAG00000000098	arf1	93	95.266	ENSPREG00000009009	-	94	95.266	Poecilia_reticulata
ENSPNAG00000000098	arf1	93	94.675	ENSPNYG00000009472	-	94	94.675	Pundamilia_nyererei
ENSPNAG00000000098	arf1	93	80.357	YDL192W	-	93	80.357	Saccharomyces_cerevisiae
ENSPNAG00000000098	arf1	93	80.357	YDL137W	-	93	80.357	Saccharomyces_cerevisiae
ENSPNAG00000000098	arf1	93	91.124	ENSSMAG00000006125	-	94	91.124	Scophthalmus_maximus
ENSPNAG00000000098	arf1	93	95.266	ENSSDUG00000017356	-	94	95.266	Seriola_dumerili
ENSPNAG00000000098	arf1	93	95.266	ENSSLDG00000008504	-	94	95.266	Seriola_lalandi_dorsalis
ENSPNAG00000000098	arf1	93	95.858	ENSSPAG00000011431	-	94	95.858	Stegastes_partitus
ENSPNAG00000000098	arf1	93	97.041	ENSTRUG00000019870	-	94	97.041	Takifugu_rubripes
ENSPNAG00000000098	arf1	93	95.858	ENSTNIG00000011685	-	94	95.858	Tetraodon_nigroviridis
ENSPNAG00000000098	arf1	93	95.266	ENSXCOG00000016687	-	92	95.266	Xiphophorus_couchianus
ENSPNAG00000000098	arf1	93	95.266	ENSXMAG00000009193	-	97	95.266	Xiphophorus_maculatus