EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000000149 (Gene tree)
Gene ID: 108414043
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 7-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 8454 bases
Position: chrKV576680.1:45679-54132
Accession: 108414043
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000000236	RRM_1	PF00076.22	1.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000014205	-	1110	XM_017686813	ENSPNAP00000000236	241 (aa)	XP_017542302	-

Gene Model

Click here to download ENSPNAG00000000149's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000000149's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000000149	-	60	53.642	ENSPNAG00000012262	srsf3a	75	66.316

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000000149	-	64	47.097	ENSATEG00000011511	-	57	68.421	Anabas_testudineus
ENSPNAG00000000149	-	93	91.630	ENSAMXG00000031648	-	94	88.646	Astyanax_mexicanus
ENSPNAG00000000149	-	63	44.910	ENSCSAVG00000010868	-	55	54.918	Ciona_savignyi
ENSPNAG00000000149	-	56	84.444	ENSCSEG00000006378	srsf7a	78	90.000	Cynoglossus_semilaevis
ENSPNAG00000000149	-	74	44.382	ENSCSEG00000001311	-	75	67.368	Cynoglossus_semilaevis
ENSPNAG00000000149	-	53	53.906	ENSCVAG00000009865	-	63	68.421	Cyprinodon_variegatus
ENSPNAG00000000149	-	52	81.746	ENSCVAG00000020083	srsf7a	68	69.886	Cyprinodon_variegatus
ENSPNAG00000000149	-	81	72.589	ENSDARG00000035325	srsf7a	87	93.902	Danio_rerio
ENSPNAG00000000149	-	59	53.548	ENSEBUG00000002677	-	57	66.667	Eptatretus_burgeri
ENSPNAG00000000149	-	58	82.014	ENSELUG00000016922	srsf7a	77	93.458	Esox_lucius
ENSPNAG00000000149	-	83	56.881	ENSELUG00000018155	srsf7b	82	74.336	Esox_lucius
ENSPNAG00000000149	-	54	48.462	ENSFCAG00000028644	-	72	51.852	Felis_catus
ENSPNAG00000000149	-	54	84.615	ENSFHEG00000007159	srsf7a	59	89.091	Fundulus_heteroclitus
ENSPNAG00000000149	-	52	68.504	ENSGAFG00000008856	srsf7b	78	76.147	Gambusia_affinis
ENSPNAG00000000149	-	51	56.452	ENSHCOG00000000149	srsf3b	89	52.381	Hippocampus_comes
ENSPNAG00000000149	-	53	52.672	ENSHCOG00000017795	-	51	66.279	Hippocampus_comes
ENSPNAG00000000149	-	54	82.308	ENSIPUG00000019088	srsf7a	54	79.167	Ictalurus_punctatus
ENSPNAG00000000149	-	94	88.106	ENSIPUG00000007928	-	94	88.106	Ictalurus_punctatus
ENSPNAG00000000149	-	54	57.143	ENSJJAG00000020230	-	66	60.909	Jaculus_jaculus
ENSPNAG00000000149	-	67	61.963	ENSMAMG00000017138	srsf7b	63	61.677	Mastacembelus_armatus
ENSPNAG00000000149	-	68	49.697	ENSMAUG00000011430	-	63	54.737	Mesocricetus_auratus
ENSPNAG00000000149	-	53	86.719	ENSMMOG00000005208	srsf7a	72	90.000	Mola_mola
ENSPNAG00000000149	-	55	47.727	ENSOMEG00000014893	srsf3b	65	66.327	Oryzias_melastigma
ENSPNAG00000000149	-	69	62.275	ENSPKIG00000017425	srsf7b	63	80.180	Paramormyrops_kingsleyae
ENSPNAG00000000149	-	71	82.222	ENSPKIG00000008209	-	69	66.321	Paramormyrops_kingsleyae
ENSPNAG00000000149	-	52	67.460	ENSPMAG00000004472	srsf7a	54	73.585	Petromyzon_marinus
ENSPNAG00000000149	-	51	87.903	ENSPREG00000020685	srsf7a	86	89.091	Poecilia_reticulata
ENSPNAG00000000149	-	52	59.701	ENSPCOG00000023721	-	69	68.468	Propithecus_coquereli
ENSPNAG00000000149	-	60	51.701	ENSPNYG00000013747	-	97	47.305	Pundamilia_nyererei
ENSPNAG00000000149	-	69	58.929	ENSRNOG00000008398	AABR07055789.1	67	69.369	Rattus_norvegicus
ENSPNAG00000000149	-	76	81.383	ENSSFOG00015006796	-	78	79.275	Scleropages_formosus
ENSPNAG00000000149	-	55	46.212	ENSSMAG00000000387	srsf3b	61	66.327	Scophthalmus_maximus
ENSPNAG00000000149	-	76	45.902	ENSSMAG00000020812	-	75	69.474	Scophthalmus_maximus
ENSPNAG00000000149	-	52	66.667	ENSSDUG00000003389	srsf7a	83	80.000	Seriola_dumerili
ENSPNAG00000000149	-	52	66.667	ENSSLDG00000007715	srsf7a	83	80.000	Seriola_lalandi_dorsalis
ENSPNAG00000000149	-	50	90.833	ENSSPAG00000022192	srsf7a	87	90.000	Stegastes_partitus
ENSPNAG00000000149	-	59	53.378	ENSVVUG00000006092	-	69	63.889	Vulpes_vulpes
ENSPNAG00000000149	-	51	86.992	ENSXCOG00000009381	srsf7a	86	88.182	Xiphophorus_couchianus