EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000000246 (Gene tree)
Gene ID: 108442739
Gene Symbol: cnot1
Alias: cdc39-like|im:7141761|kiaa1007l|wu:fc58h04|zgc:152902
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 19440 bases
Position: chrKV575781.1:448186-467625
Accession: 108442739
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000022949	Not1	PF04054.15	4.3e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000013881	-	6972	XM_017722921	ENSPNAP00000022949	2323 (aa)	XP_017578410	-

Gene Model

Click here to download ENSPNAG00000000246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000000246's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000000246	cnot1	100	90.514	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSPNAG00000000246	cnot1	100	90.905	ENSAPOG00000005042	cnot1	100	90.821	Acanthochromis_polyacanthus
ENSPNAG00000000246	cnot1	100	90.556	ENSAMEG00000017298	CNOT1	100	90.135	Ailuropoda_melanoleuca
ENSPNAG00000000246	cnot1	90	92.333	ENSACIG00000016003	cnot1	100	92.520	Amphilophus_citrinellus
ENSPNAG00000000246	cnot1	100	95.714	ENSAPEG00000022342	cnot1	100	95.628	Amphiprion_percula
ENSPNAG00000000246	cnot1	100	91.246	ENSATEG00000012892	cnot1	100	91.246	Anabas_testudineus
ENSPNAG00000000246	cnot1	100	89.500	ENSAPLG00000007162	CNOT1	100	89.458	Anas_platyrhynchos
ENSPNAG00000000246	cnot1	90	88.601	ENSACAG00000001602	CNOT1	98	88.404	Anolis_carolinensis
ENSPNAG00000000246	cnot1	100	87.395	ENSANAG00000038198	CNOT1	100	87.186	Aotus_nancymaae
ENSPNAG00000000246	cnot1	100	91.460	ENSACLG00000014234	cnot1	100	91.460	Astatotilapia_calliptera
ENSPNAG00000000246	cnot1	100	97.297	ENSAMXG00000013170	cnot1	100	97.297	Astyanax_mexicanus
ENSPNAG00000000246	cnot1	95	96.208	ENSBTAG00000020782	CNOT1	100	96.982	Bos_taurus
ENSPNAG00000000246	cnot1	79	41.785	WBGene00002845	let-711	92	54.008	Caenorhabditis_elegans
ENSPNAG00000000246	cnot1	100	90.240	ENSCJAG00000011318	CNOT1	100	92.364	Callithrix_jacchus
ENSPNAG00000000246	cnot1	100	89.673	ENSCAFG00000008426	CNOT1	100	89.631	Canis_familiaris
ENSPNAG00000000246	cnot1	100	91.502	ENSCAFG00020010156	CNOT1	100	93.788	Canis_lupus_dingo
ENSPNAG00000000246	cnot1	100	90.324	ENSCHIG00000010452	CNOT1	100	89.903	Capra_hircus
ENSPNAG00000000246	cnot1	100	90.366	ENSTSYG00000006888	CNOT1	100	89.945	Carlito_syrichta
ENSPNAG00000000246	cnot1	100	86.501	ENSCPOG00000013026	CNOT1	100	85.955	Cavia_porcellus
ENSPNAG00000000246	cnot1	100	88.725	ENSCCAG00000026333	CNOT1	100	88.305	Cebus_capucinus
ENSPNAG00000000246	cnot1	100	90.324	ENSCATG00000032625	CNOT1	100	89.903	Cercocebus_atys
ENSPNAG00000000246	cnot1	100	90.324	ENSCLAG00000006289	CNOT1	100	89.903	Chinchilla_lanigera
ENSPNAG00000000246	cnot1	100	90.324	ENSCSAG00000004731	CNOT1	100	89.903	Chlorocebus_sabaeus
ENSPNAG00000000246	cnot1	80	97.727	ENSCHOG00000009712	CNOT1	83	97.173	Choloepus_hoffmanni
ENSPNAG00000000246	cnot1	93	95.644	ENSCPBG00000026222	CNOT1	98	95.644	Chrysemys_picta_bellii
ENSPNAG00000000246	cnot1	100	58.316	ENSCING00000009149	-	100	58.136	Ciona_intestinalis
ENSPNAG00000000246	cnot1	89	62.653	ENSCSAVG00000002414	-	99	62.447	Ciona_savignyi
ENSPNAG00000000246	cnot1	100	88.221	ENSCANG00000040534	CNOT1	100	88.179	Colobus_angolensis_palliatus
ENSPNAG00000000246	cnot1	100	90.114	ENSCGRG00001016365	Cnot1	100	89.693	Cricetulus_griseus_chok1gshd
ENSPNAG00000000246	cnot1	100	90.114	ENSCGRG00000001714	Cnot1	100	89.693	Cricetulus_griseus_crigri
ENSPNAG00000000246	cnot1	100	89.259	ENSCVAG00000018930	cnot1	100	89.469	Cyprinodon_variegatus
ENSPNAG00000000246	cnot1	100	94.068	ENSDARG00000004174	cnot1	100	94.068	Danio_rerio
ENSPNAG00000000246	cnot1	100	87.931	ENSDNOG00000013250	CNOT1	100	87.847	Dasypus_novemcinctus
ENSPNAG00000000246	cnot1	99	46.148	FBgn0085436	Not1	99	48.073	Drosophila_melanogaster
ENSPNAG00000000246	cnot1	84	94.277	ENSETEG00000012806	CNOT1	84	94.277	Echinops_telfairi
ENSPNAG00000000246	cnot1	81	75.595	ENSEBUG00000011534	cnot1	95	75.595	Eptatretus_burgeri
ENSPNAG00000000246	cnot1	95	95.825	ENSEASG00005005819	CNOT1	100	96.982	Equus_asinus_asinus
ENSPNAG00000000246	cnot1	100	90.324	ENSECAG00000009889	CNOT1	100	89.903	Equus_caballus
ENSPNAG00000000246	cnot1	89	89.072	ENSEEUG00000006015	CNOT1	90	89.072	Erinaceus_europaeus
ENSPNAG00000000246	cnot1	100	94.886	ENSELUG00000014085	cnot1	100	94.843	Esox_lucius
ENSPNAG00000000246	cnot1	100	89.807	ENSFCAG00000025155	CNOT1	100	89.765	Felis_catus
ENSPNAG00000000246	cnot1	100	89.903	ENSFALG00000007285	CNOT1	100	89.483	Ficedula_albicollis
ENSPNAG00000000246	cnot1	100	90.282	ENSFDAG00000013399	CNOT1	100	89.861	Fukomys_damarensis
ENSPNAG00000000246	cnot1	100	92.347	ENSFHEG00000020574	cnot1	100	92.220	Fundulus_heteroclitus
ENSPNAG00000000246	cnot1	90	92.479	ENSGMOG00000012864	cnot1	100	92.479	Gadus_morhua
ENSPNAG00000000246	cnot1	100	89.819	ENSGALG00000002301	CNOT1	100	89.398	Gallus_gallus
ENSPNAG00000000246	cnot1	100	94.171	ENSGAFG00000015005	cnot1	100	94.128	Gambusia_affinis
ENSPNAG00000000246	cnot1	90	92.390	ENSGACG00000002606	cnot1	100	97.573	Gasterosteus_aculeatus
ENSPNAG00000000246	cnot1	100	90.324	ENSGAGG00000022646	CNOT1	100	91.871	Gopherus_agassizii
ENSPNAG00000000246	cnot1	100	90.366	ENSGGOG00000009547	CNOT1	100	89.945	Gorilla_gorilla
ENSPNAG00000000246	cnot1	100	91.544	ENSHBUG00000001729	cnot1	100	91.544	Haplochromis_burtoni
ENSPNAG00000000246	cnot1	100	90.198	ENSHGLG00000014322	CNOT1	100	89.819	Heterocephalus_glaber_female
ENSPNAG00000000246	cnot1	100	92.027	ENSHCOG00000006501	cnot1	100	92.027	Hippocampus_comes
ENSPNAG00000000246	cnot1	100	97.127	ENSIPUG00000011915	cnot1	100	97.127	Ictalurus_punctatus
ENSPNAG00000000246	cnot1	100	90.194	ENSSTOG00000005490	CNOT1	100	90.194	Ictidomys_tridecemlineatus
ENSPNAG00000000246	cnot1	100	89.777	ENSJJAG00000000633	Cnot1	100	89.356	Jaculus_jaculus
ENSPNAG00000000246	cnot1	100	92.695	ENSKMAG00000006149	cnot1	100	92.611	Kryptolebias_marmoratus
ENSPNAG00000000246	cnot1	95	98.403	ENSLBEG00000004740	cnot1	100	98.403	Labrus_bergylta
ENSPNAG00000000246	cnot1	100	90.618	ENSLACG00000010869	CNOT1	100	90.198	Latimeria_chalumnae
ENSPNAG00000000246	cnot1	100	93.569	ENSLOCG00000006324	cnot1	100	93.148	Lepisosteus_oculatus
ENSPNAG00000000246	cnot1	100	89.912	ENSLAFG00000000098	CNOT1	100	89.870	Loxodonta_africana
ENSPNAG00000000246	cnot1	100	90.514	ENSMFAG00000035888	CNOT1	100	90.093	Macaca_fascicularis
ENSPNAG00000000246	cnot1	100	90.282	ENSMMUG00000014625	CNOT1	94	98.545	Macaca_mulatta
ENSPNAG00000000246	cnot1	100	87.626	ENSMNEG00000031820	CNOT1	100	89.496	Macaca_nemestrina
ENSPNAG00000000246	cnot1	100	88.674	ENSMLEG00000040933	CNOT1	100	88.633	Mandrillus_leucophaeus
ENSPNAG00000000246	cnot1	100	94.256	ENSMAMG00000016524	cnot1	100	94.256	Mastacembelus_armatus
ENSPNAG00000000246	cnot1	100	88.753	ENSMZEG00005016210	cnot1	100	88.753	Maylandia_zebra
ENSPNAG00000000246	cnot1	100	90.093	ENSMGAG00000001908	CNOT1	100	89.671	Meleagris_gallopavo
ENSPNAG00000000246	cnot1	100	90.560	ENSMICG00000007071	CNOT1	100	90.139	Microcebus_murinus
ENSPNAG00000000246	cnot1	100	90.114	ENSMOCG00000017969	Cnot1	100	89.693	Microtus_ochrogaster
ENSPNAG00000000246	cnot1	100	89.853	ENSMMOG00000019134	cnot1	100	89.726	Mola_mola
ENSPNAG00000000246	cnot1	100	89.950	ENSMODG00000014199	CNOT1	100	89.907	Monodelphis_domestica
ENSPNAG00000000246	cnot1	100	95.412	ENSMALG00000008645	cnot1	100	95.412	Monopterus_albus
ENSPNAG00000000246	cnot1	95	97.143	MGP_CAROLIEiJ_G0031430	Cnot1	92	97.143	Mus_caroli
ENSPNAG00000000246	cnot1	100	90.219	ENSMUSG00000036550	Cnot1	100	89.798	Mus_musculus
ENSPNAG00000000246	cnot1	100	90.114	MGP_PahariEiJ_G0023028	Cnot1	100	89.693	Mus_pahari
ENSPNAG00000000246	cnot1	100	90.114	MGP_SPRETEiJ_G0032549	Cnot1	100	89.693	Mus_spretus
ENSPNAG00000000246	cnot1	100	90.366	ENSMPUG00000004830	CNOT1	100	89.945	Mustela_putorius_furo
ENSPNAG00000000246	cnot1	100	90.240	ENSMLUG00000003728	CNOT1	100	89.735	Myotis_lucifugus
ENSPNAG00000000246	cnot1	100	90.198	ENSNGAG00000018628	Cnot1	100	89.777	Nannospalax_galili
ENSPNAG00000000246	cnot1	97	86.673	ENSNBRG00000019358	cnot1	100	87.307	Neolamprologus_brichardi
ENSPNAG00000000246	cnot1	100	90.404	ENSNLEG00000003566	CNOT1	100	89.983	Nomascus_leucogenys
ENSPNAG00000000246	cnot1	87	93.056	ENSMEUG00000006145	CNOT1	87	93.056	Notamacropus_eugenii
ENSPNAG00000000246	cnot1	85	98.058	ENSOPRG00000005604	CNOT1	86	98.058	Ochotona_princeps
ENSPNAG00000000246	cnot1	100	90.240	ENSODEG00000016337	CNOT1	100	89.819	Octodon_degus
ENSPNAG00000000246	cnot1	100	93.227	ENSONIG00000007358	cnot1	100	93.227	Oreochromis_niloticus
ENSPNAG00000000246	cnot1	90	89.660	ENSOANG00000012109	CNOT1	100	89.474	Ornithorhynchus_anatinus
ENSPNAG00000000246	cnot1	100	90.324	ENSOCUG00000006911	CNOT1	100	89.903	Oryctolagus_cuniculus
ENSPNAG00000000246	cnot1	100	92.473	ENSORLG00000013734	cnot1	100	92.473	Oryzias_latipes
ENSPNAG00000000246	cnot1	100	90.733	ENSORLG00020017012	cnot1	100	90.733	Oryzias_latipes_hni
ENSPNAG00000000246	cnot1	100	90.649	ENSORLG00015007091	cnot1	100	90.649	Oryzias_latipes_hsok
ENSPNAG00000000246	cnot1	100	90.362	ENSOMEG00000015124	cnot1	100	90.572	Oryzias_melastigma
ENSPNAG00000000246	cnot1	100	90.450	ENSOGAG00000000543	CNOT1	100	90.029	Otolemur_garnettii
ENSPNAG00000000246	cnot1	100	90.324	ENSOARG00000001567	CNOT1	100	89.903	Ovis_aries
ENSPNAG00000000246	cnot1	100	90.324	ENSPPAG00000022013	CNOT1	100	89.903	Pan_paniscus
ENSPNAG00000000246	cnot1	100	90.366	ENSPPRG00000004867	CNOT1	100	89.945	Panthera_pardus
ENSPNAG00000000246	cnot1	100	90.366	ENSPTIG00000012589	CNOT1	100	89.945	Panthera_tigris_altaica
ENSPNAG00000000246	cnot1	100	89.765	ENSPTRG00000008183	CNOT1	100	89.723	Pan_troglodytes
ENSPNAG00000000246	cnot1	100	87.164	ENSPANG00000020901	CNOT1	100	86.887	Papio_anubis
ENSPNAG00000000246	cnot1	100	95.105	ENSPKIG00000023538	CNOT1	100	94.504	Paramormyrops_kingsleyae
ENSPNAG00000000246	cnot1	100	86.608	ENSPKIG00000002914	CNOT1	99	86.018	Paramormyrops_kingsleyae
ENSPNAG00000000246	cnot1	100	90.072	ENSPSIG00000005499	CNOT1	100	89.651	Pelodiscus_sinensis
ENSPNAG00000000246	cnot1	100	79.040	ENSPMAG00000009381	cnot1	100	78.779	Petromyzon_marinus
ENSPNAG00000000246	cnot1	100	92.146	ENSPCIG00000007343	CNOT1	100	97.183	Phascolarctos_cinereus
ENSPNAG00000000246	cnot1	99	91.992	ENSPFOG00000003497	cnot1	100	91.907	Poecilia_formosa
ENSPNAG00000000246	cnot1	95	98.004	ENSPLAG00000014018	cnot1	100	98.004	Poecilia_latipinna
ENSPNAG00000000246	cnot1	95	98.004	ENSPMEG00000005868	cnot1	100	98.004	Poecilia_mexicana
ENSPNAG00000000246	cnot1	95	98.004	ENSPREG00000018793	cnot1	100	98.004	Poecilia_reticulata
ENSPNAG00000000246	cnot1	100	90.366	ENSPPYG00000007410	CNOT1	100	89.945	Pongo_abelii
ENSPNAG00000000246	cnot1	89	85.786	ENSPCAG00000003241	CNOT1	90	85.888	Procavia_capensis
ENSPNAG00000000246	cnot1	100	89.958	ENSPCOG00000027139	CNOT1	100	89.916	Propithecus_coquereli
ENSPNAG00000000246	cnot1	100	87.416	ENSPVAG00000004243	CNOT1	100	87.626	Pteropus_vampyrus
ENSPNAG00000000246	cnot1	100	90.671	ENSPNYG00000012919	cnot1	100	90.671	Pundamilia_nyererei
ENSPNAG00000000246	cnot1	100	90.072	ENSRNOG00000012271	Cnot1	100	89.651	Rattus_norvegicus
ENSPNAG00000000246	cnot1	100	87.836	ENSRBIG00000044598	CNOT1	100	87.794	Rhinopithecus_bieti
ENSPNAG00000000246	cnot1	100	90.324	ENSRROG00000000906	CNOT1	100	89.903	Rhinopithecus_roxellana
ENSPNAG00000000246	cnot1	100	85.816	ENSSBOG00000029155	CNOT1	100	85.774	Saimiri_boliviensis_boliviensis
ENSPNAG00000000246	cnot1	100	90.248	ENSSHAG00000012187	CNOT1	100	89.702	Sarcophilus_harrisii
ENSPNAG00000000246	cnot1	100	91.849	ENSSFOG00015017614	cnot1	100	91.345	Scleropages_formosus
ENSPNAG00000000246	cnot1	100	91.615	ENSSMAG00000013844	cnot1	100	91.864	Scophthalmus_maximus
ENSPNAG00000000246	cnot1	100	91.035	ENSSDUG00000021491	cnot1	100	91.035	Seriola_dumerili
ENSPNAG00000000246	cnot1	100	93.434	ENSSLDG00000014816	cnot1	100	93.434	Seriola_lalandi_dorsalis
ENSPNAG00000000246	cnot1	84	97.400	ENSSARG00000000762	CNOT1	88	97.400	Sorex_araneus
ENSPNAG00000000246	cnot1	100	95.501	ENSSPAG00000018802	cnot1	100	95.544	Stegastes_partitus
ENSPNAG00000000246	cnot1	100	92.182	ENSSSCG00000002799	CNOT1	100	96.982	Sus_scrofa
ENSPNAG00000000246	cnot1	100	89.916	ENSTGUG00000005919	CNOT1	100	89.496	Taeniopygia_guttata
ENSPNAG00000000246	cnot1	100	91.374	ENSTNIG00000018706	cnot1	100	91.290	Tetraodon_nigroviridis
ENSPNAG00000000246	cnot1	82	97.183	ENSTBEG00000000720	CNOT1	80	97.183	Tupaia_belangeri
ENSPNAG00000000246	cnot1	95	88.934	ENSTTRG00000008460	CNOT1	95	88.352	Tursiops_truncatus
ENSPNAG00000000246	cnot1	100	90.366	ENSUAMG00000009251	CNOT1	100	89.945	Ursus_americanus
ENSPNAG00000000246	cnot1	100	90.366	ENSUMAG00000021291	CNOT1	100	89.945	Ursus_maritimus
ENSPNAG00000000246	cnot1	97	91.957	ENSVPAG00000008846	CNOT1	97	91.957	Vicugna_pacos
ENSPNAG00000000246	cnot1	100	91.502	ENSVVUG00000024037	CNOT1	100	93.788	Vulpes_vulpes
ENSPNAG00000000246	cnot1	100	85.107	ENSXETG00000015900	cnot1	100	85.023	Xenopus_tropicalis
ENSPNAG00000000246	cnot1	100	94.256	ENSXCOG00000013552	cnot1	100	94.213	Xiphophorus_couchianus
ENSPNAG00000000246	cnot1	100	94.299	ENSXMAG00000006031	cnot1	100	94.256	Xiphophorus_maculatus