EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000000265 (Gene tree)
Gene ID: 108411424
Gene Symbol: pop1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 11277 bases
Position: chrKV576073.1:164552-175828
Accession: 108411424
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000000463	POP1	PF06978.11	1.9e-37	1	2
ENSPNAP00000000463	POP1	PF06978.11	1.9e-37	2	2
ENSPNAP00000000463	POPLD	PF08170.12	7.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000013816	-	3564	XM_017682986	ENSPNAP00000000463	997 (aa)	XP_017538475	UPI000814AEC2

Gene Model

Click here to download ENSPNAG00000000265's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000000265's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000000265	pop1	100	43.893	ENSG00000104356	POP1	100	45.638	Homo_sapiens
ENSPNAG00000000265	pop1	100	58.164	ENSAPOG00000008198	pop1	100	57.844	Acanthochromis_polyacanthus
ENSPNAG00000000265	pop1	100	43.927	ENSAMEG00000000556	POP1	100	46.020	Ailuropoda_melanoleuca
ENSPNAG00000000265	pop1	100	56.151	ENSACIG00000004169	POP1	100	56.151	Amphilophus_citrinellus
ENSPNAG00000000265	pop1	100	58.472	ENSAOCG00000010991	pop1	100	58.472	Amphiprion_ocellaris
ENSPNAG00000000265	pop1	100	55.094	ENSAPEG00000007607	pop1	100	55.138	Amphiprion_percula
ENSPNAG00000000265	pop1	100	56.647	ENSATEG00000024814	POP1	100	56.644	Anabas_testudineus
ENSPNAG00000000265	pop1	95	43.881	ENSAPLG00000014418	POP1	99	44.235	Anas_platyrhynchos
ENSPNAG00000000265	pop1	99	44.475	ENSACAG00000016083	POP1	100	44.730	Anolis_carolinensis
ENSPNAG00000000265	pop1	100	42.799	ENSANAG00000026360	POP1	100	42.799	Aotus_nancymaae
ENSPNAG00000000265	pop1	100	55.350	ENSACLG00000010951	pop1	100	55.350	Astatotilapia_calliptera
ENSPNAG00000000265	pop1	100	70.524	ENSAMXG00000014483	POP1	100	70.524	Astyanax_mexicanus
ENSPNAG00000000265	pop1	91	69.512	ENSBTAG00000012596	POP1	100	44.496	Bos_taurus
ENSPNAG00000000265	pop1	58	30.830	WBGene00015486	C05D11.9	66	30.830	Caenorhabditis_elegans
ENSPNAG00000000265	pop1	100	43.594	ENSCJAG00000015567	POP1	100	45.622	Callithrix_jacchus
ENSPNAG00000000265	pop1	100	46.992	ENSCAFG00000000469	POP1	100	46.992	Canis_familiaris
ENSPNAG00000000265	pop1	100	45.688	ENSCAFG00020026765	POP1	100	45.688	Canis_lupus_dingo
ENSPNAG00000000265	pop1	100	43.566	ENSCHIG00000017066	POP1	100	44.055	Capra_hircus
ENSPNAG00000000265	pop1	100	44.986	ENSTSYG00000003097	POP1	100	45.814	Carlito_syrichta
ENSPNAG00000000265	pop1	99	44.240	ENSCAPG00000007251	POP1	99	44.414	Cavia_aperea
ENSPNAG00000000265	pop1	99	45.556	ENSCPOG00000002901	POP1	99	45.556	Cavia_porcellus
ENSPNAG00000000265	pop1	100	46.531	ENSCCAG00000018939	POP1	100	46.660	Cebus_capucinus
ENSPNAG00000000265	pop1	100	43.248	ENSCATG00000040916	POP1	100	45.347	Cercocebus_atys
ENSPNAG00000000265	pop1	100	43.303	ENSCLAG00000007208	POP1	97	45.429	Chinchilla_lanigera
ENSPNAG00000000265	pop1	93	46.620	ENSCSAG00000012340	POP1	99	46.720	Chlorocebus_sabaeus
ENSPNAG00000000265	pop1	97	41.699	ENSCHOG00000011432	POP1	99	44.112	Choloepus_hoffmanni
ENSPNAG00000000265	pop1	100	44.486	ENSCPBG00000006373	POP1	100	46.512	Chrysemys_picta_bellii
ENSPNAG00000000265	pop1	67	36.220	ENSCING00000008323	-	88	36.220	Ciona_intestinalis
ENSPNAG00000000265	pop1	100	43.522	ENSCANG00000001647	POP1	100	45.803	Colobus_angolensis_palliatus
ENSPNAG00000000265	pop1	100	42.670	ENSCGRG00001017308	Pop1	100	43.178	Cricetulus_griseus_chok1gshd
ENSPNAG00000000265	pop1	100	40.134	ENSCGRG00000010824	Pop1	100	40.535	Cricetulus_griseus_crigri
ENSPNAG00000000265	pop1	100	54.300	ENSCSEG00000008737	POP1	100	54.396	Cynoglossus_semilaevis
ENSPNAG00000000265	pop1	100	56.342	ENSCVAG00000022248	pop1	100	56.637	Cyprinodon_variegatus
ENSPNAG00000000265	pop1	51	55.424	ENSDARG00000102087	pop1	99	55.424	Danio_rerio
ENSPNAG00000000265	pop1	100	43.141	ENSDNOG00000019974	POP1	100	43.321	Dasypus_novemcinctus
ENSPNAG00000000265	pop1	100	40.278	ENSDORG00000015384	Pop1	100	40.463	Dipodomys_ordii
ENSPNAG00000000265	pop1	88	43.225	ENSETEG00000007839	POP1	88	43.225	Echinops_telfairi
ENSPNAG00000000265	pop1	50	43.340	ENSEBUG00000009897	pop1	95	43.340	Eptatretus_burgeri
ENSPNAG00000000265	pop1	100	43.675	ENSEASG00005003189	POP1	98	46.438	Equus_asinus_asinus
ENSPNAG00000000265	pop1	100	46.623	ENSECAG00000024236	POP1	100	46.716	Equus_caballus
ENSPNAG00000000265	pop1	52	75.325	ENSEEUG00000003050	-	54	75.325	Erinaceus_europaeus
ENSPNAG00000000265	pop1	99	57.129	ENSELUG00000003526	pop1	99	57.424	Esox_lucius
ENSPNAG00000000265	pop1	100	43.796	ENSFCAG00000002168	POP1	100	46.118	Felis_catus
ENSPNAG00000000265	pop1	100	41.998	ENSFALG00000005711	POP1	100	44.506	Ficedula_albicollis
ENSPNAG00000000265	pop1	100	42.557	ENSFDAG00000017068	POP1	100	45.018	Fukomys_damarensis
ENSPNAG00000000265	pop1	100	56.441	ENSFHEG00000019518	pop1	100	56.539	Fundulus_heteroclitus
ENSPNAG00000000265	pop1	100	53.854	ENSGMOG00000000659	POP1	100	53.953	Gadus_morhua
ENSPNAG00000000265	pop1	100	54.706	ENSGAFG00000019770	POP1	100	54.804	Gambusia_affinis
ENSPNAG00000000265	pop1	100	52.078	ENSGACG00000003499	pop1	100	52.262	Gasterosteus_aculeatus
ENSPNAG00000000265	pop1	100	46.269	ENSGAGG00000011737	POP1	98	46.283	Gopherus_agassizii
ENSPNAG00000000265	pop1	100	43.985	ENSGGOG00000003176	POP1	100	45.730	Gorilla_gorilla
ENSPNAG00000000265	pop1	100	55.350	ENSHBUG00000021583	pop1	100	55.415	Haplochromis_burtoni
ENSPNAG00000000265	pop1	100	42.701	ENSHGLG00000006029	POP1	100	44.995	Heterocephalus_glaber_female
ENSPNAG00000000265	pop1	100	42.701	ENSHGLG00100016879	POP1	100	44.995	Heterocephalus_glaber_male
ENSPNAG00000000265	pop1	100	52.952	ENSHCOG00000013888	pop1	100	52.952	Hippocampus_comes
ENSPNAG00000000265	pop1	100	66.339	ENSIPUG00000018336	pop1	100	66.339	Ictalurus_punctatus
ENSPNAG00000000265	pop1	100	45.656	ENSSTOG00000011455	POP1	97	45.656	Ictidomys_tridecemlineatus
ENSPNAG00000000265	pop1	100	44.697	ENSJJAG00000013325	Pop1	100	44.886	Jaculus_jaculus
ENSPNAG00000000265	pop1	100	55.859	ENSKMAG00000001346	POP1	100	56.043	Kryptolebias_marmoratus
ENSPNAG00000000265	pop1	100	53.724	ENSLBEG00000024457	POP1	100	53.724	Labrus_bergylta
ENSPNAG00000000265	pop1	95	48.239	ENSLACG00000012498	POP1	98	48.532	Latimeria_chalumnae
ENSPNAG00000000265	pop1	99	51.220	ENSLOCG00000009817	POP1	99	53.471	Lepisosteus_oculatus
ENSPNAG00000000265	pop1	100	43.923	ENSLAFG00000010770	POP1	100	46.402	Loxodonta_africana
ENSPNAG00000000265	pop1	100	44.099	ENSMFAG00000000347	POP1	100	45.746	Macaca_fascicularis
ENSPNAG00000000265	pop1	100	43.824	ENSMNEG00000036870	POP1	100	45.471	Macaca_nemestrina
ENSPNAG00000000265	pop1	100	44.190	ENSMLEG00000034986	POP1	100	45.837	Mandrillus_leucophaeus
ENSPNAG00000000265	pop1	100	56.809	ENSMAMG00000004040	pop1	100	56.907	Mastacembelus_armatus
ENSPNAG00000000265	pop1	100	55.350	ENSMZEG00005025448	pop1	100	55.415	Maylandia_zebra
ENSPNAG00000000265	pop1	100	43.391	ENSMGAG00000012167	POP1	100	44.313	Meleagris_gallopavo
ENSPNAG00000000265	pop1	100	43.470	ENSMAUG00000017537	Pop1	100	45.200	Mesocricetus_auratus
ENSPNAG00000000265	pop1	100	45.429	ENSMICG00000004361	POP1	100	45.799	Microcebus_murinus
ENSPNAG00000000265	pop1	100	42.804	ENSMOCG00000006356	Pop1	100	45.023	Microtus_ochrogaster
ENSPNAG00000000265	pop1	100	54.311	ENSMMOG00000018242	pop1	100	54.509	Mola_mola
ENSPNAG00000000265	pop1	91	69.231	ENSMODG00000006561	POP1	99	44.566	Monodelphis_domestica
ENSPNAG00000000265	pop1	100	57.505	ENSMALG00000012621	POP1	100	57.505	Monopterus_albus
ENSPNAG00000000265	pop1	100	43.808	MGP_CAROLIEiJ_G0019726	Pop1	100	43.993	Mus_caroli
ENSPNAG00000000265	pop1	100	44.044	ENSMUSG00000022325	Pop1	100	44.044	Mus_musculus
ENSPNAG00000000265	pop1	100	43.860	MGP_PahariEiJ_G0019735	Pop1	100	44.620	Mus_pahari
ENSPNAG00000000265	pop1	100	43.981	MGP_SPRETEiJ_G0020622	Pop1	100	44.167	Mus_spretus
ENSPNAG00000000265	pop1	100	46.125	ENSMPUG00000015250	POP1	100	46.125	Mustela_putorius_furo
ENSPNAG00000000265	pop1	100	42.896	ENSMLUG00000010204	POP1	100	42.896	Myotis_lucifugus
ENSPNAG00000000265	pop1	100	42.686	ENSNGAG00000001582	Pop1	100	45.253	Nannospalax_galili
ENSPNAG00000000265	pop1	100	53.406	ENSNBRG00000002356	pop1	100	53.603	Neolamprologus_brichardi
ENSPNAG00000000265	pop1	100	43.223	ENSNLEG00000002541	POP1	100	45.147	Nomascus_leucogenys
ENSPNAG00000000265	pop1	89	55.043	ENSMEUG00000003118	POP1	90	55.043	Notamacropus_eugenii
ENSPNAG00000000265	pop1	100	45.767	ENSOPRG00000007667	POP1	100	45.767	Ochotona_princeps
ENSPNAG00000000265	pop1	100	42.766	ENSODEG00000003984	POP1	100	45.102	Octodon_degus
ENSPNAG00000000265	pop1	100	56.311	ENSONIG00000016445	pop1	100	56.408	Oreochromis_niloticus
ENSPNAG00000000265	pop1	58	46.733	ENSOANG00000001278	-	94	46.733	Ornithorhynchus_anatinus
ENSPNAG00000000265	pop1	100	42.172	ENSOCUG00000017400	POP1	100	44.586	Oryctolagus_cuniculus
ENSPNAG00000000265	pop1	100	55.588	ENSORLG00000002839	pop1	100	55.731	Oryzias_latipes
ENSPNAG00000000265	pop1	100	52.212	ENSORLG00020022450	POP1	100	52.212	Oryzias_latipes_hni
ENSPNAG00000000265	pop1	100	55.217	ENSORLG00015012746	POP1	100	55.709	Oryzias_latipes_hsok
ENSPNAG00000000265	pop1	100	52.959	ENSOMEG00000006915	pop1	99	52.959	Oryzias_melastigma
ENSPNAG00000000265	pop1	100	46.104	ENSOGAG00000001466	POP1	100	46.140	Otolemur_garnettii
ENSPNAG00000000265	pop1	100	43.710	ENSPPAG00000018410	POP1	100	45.638	Pan_paniscus
ENSPNAG00000000265	pop1	100	45.295	ENSPPRG00000005002	POP1	100	45.480	Panthera_pardus
ENSPNAG00000000265	pop1	100	43.161	ENSPTIG00000016527	POP1	100	45.480	Panthera_tigris_altaica
ENSPNAG00000000265	pop1	100	43.893	ENSPTRG00000020458	POP1	100	45.638	Pan_troglodytes
ENSPNAG00000000265	pop1	100	44.373	ENSPANG00000009704	POP1	100	46.020	Papio_anubis
ENSPNAG00000000265	pop1	100	55.717	ENSPKIG00000016325	POP1	100	55.620	Paramormyrops_kingsleyae
ENSPNAG00000000265	pop1	100	43.611	ENSPSIG00000012343	POP1	100	45.471	Pelodiscus_sinensis
ENSPNAG00000000265	pop1	100	51.351	ENSPMGG00000022253	POP1	100	51.448	Periophthalmus_magnuspinnatus
ENSPNAG00000000265	pop1	99	41.742	ENSPEMG00000023633	Pop1	100	44.161	Peromyscus_maniculatus_bairdii
ENSPNAG00000000265	pop1	83	53.659	ENSPMAG00000003209	POP1	100	40.283	Petromyzon_marinus
ENSPNAG00000000265	pop1	99	42.740	ENSPCIG00000012216	POP1	99	44.840	Phascolarctos_cinereus
ENSPNAG00000000265	pop1	100	55.186	ENSPFOG00000012490	POP1	100	55.186	Poecilia_formosa
ENSPNAG00000000265	pop1	100	55.142	ENSPLAG00000004646	POP1	100	55.142	Poecilia_latipinna
ENSPNAG00000000265	pop1	100	55.490	ENSPMEG00000019592	POP1	100	55.490	Poecilia_mexicana
ENSPNAG00000000265	pop1	100	55.122	ENSPREG00000020951	POP1	100	55.122	Poecilia_reticulata
ENSPNAG00000000265	pop1	100	43.646	ENSPPYG00000018777	POP1	100	45.396	Pongo_abelii
ENSPNAG00000000265	pop1	100	41.035	ENSPCAG00000016662	POP1	100	41.035	Procavia_capensis
ENSPNAG00000000265	pop1	100	45.429	ENSPCOG00000019420	POP1	100	45.799	Propithecus_coquereli
ENSPNAG00000000265	pop1	100	42.976	ENSPVAG00000014468	POP1	100	45.000	Pteropus_vampyrus
ENSPNAG00000000265	pop1	100	53.625	ENSPNYG00000004476	pop1	100	53.823	Pundamilia_nyererei
ENSPNAG00000000265	pop1	100	43.796	ENSRNOG00000005243	Pop1	100	43.796	Rattus_norvegicus
ENSPNAG00000000265	pop1	100	43.824	ENSRBIG00000007996	POP1	100	45.845	Rhinopithecus_bieti
ENSPNAG00000000265	pop1	100	44.099	ENSRROG00000012334	POP1	100	46.210	Rhinopithecus_roxellana
ENSPNAG00000000265	pop1	99	45.260	ENSSBOG00000020830	POP1	100	45.387	Saimiri_boliviensis_boliviensis
ENSPNAG00000000265	pop1	99	45.046	ENSSHAG00000000296	POP1	99	45.046	Sarcophilus_harrisii
ENSPNAG00000000265	pop1	100	55.816	ENSSFOG00015007429	pop1	99	55.816	Scleropages_formosus
ENSPNAG00000000265	pop1	100	57.669	ENSSMAG00000010467	POP1	100	57.585	Scophthalmus_maximus
ENSPNAG00000000265	pop1	100	57.838	ENSSDUG00000007817	POP1	100	58.033	Seriola_dumerili
ENSPNAG00000000265	pop1	100	57.599	ENSSLDG00000012565	POP1	100	57.946	Seriola_lalandi_dorsalis
ENSPNAG00000000265	pop1	100	41.783	ENSSPUG00000003550	-	100	43.825	Sphenodon_punctatus
ENSPNAG00000000265	pop1	100	53.711	ENSSPAG00000014955	pop1	100	53.711	Stegastes_partitus
ENSPNAG00000000265	pop1	100	44.837	ENSSSCG00000006078	POP1	100	45.961	Sus_scrofa
ENSPNAG00000000265	pop1	95	40.634	ENSTGUG00000012011	-	99	42.914	Taeniopygia_guttata
ENSPNAG00000000265	pop1	100	52.884	ENSTRUG00000010856	pop1	100	52.884	Takifugu_rubripes
ENSPNAG00000000265	pop1	95	55.758	ENSTNIG00000013297	pop1	98	53.333	Tetraodon_nigroviridis
ENSPNAG00000000265	pop1	93	44.341	ENSTBEG00000014214	POP1	95	44.713	Tupaia_belangeri
ENSPNAG00000000265	pop1	100	41.974	ENSTTRG00000016071	POP1	100	44.249	Tursiops_truncatus
ENSPNAG00000000265	pop1	99	44.329	ENSUAMG00000017309	POP1	100	46.604	Ursus_americanus
ENSPNAG00000000265	pop1	94	51.711	ENSUMAG00000016952	POP1	100	51.145	Ursus_maritimus
ENSPNAG00000000265	pop1	87	50.903	ENSVPAG00000008278	POP1	82	50.903	Vicugna_pacos
ENSPNAG00000000265	pop1	100	45.872	ENSVVUG00000010994	POP1	100	45.872	Vulpes_vulpes
ENSPNAG00000000265	pop1	100	48.743	ENSXCOG00000017043	POP1	100	48.743	Xiphophorus_couchianus
ENSPNAG00000000265	pop1	100	54.244	ENSXMAG00000002472	POP1	100	54.244	Xiphophorus_maculatus