EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000000295 (Gene tree)
Gene ID: 108443275
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 30541 bases
Position: chrKV575825.1:318258-348798
Accession: 108443275
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000000501	ResIII	PF04851.15	8.4e-07	1	1
ENSPNAP00000000499	ResIII	PF04851.15	9.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000013750	-	2481	-	ENSPNAP00000000499	826 (aa)	-	-
ENSPNAT00000013744	-	3345	XM_017723826	ENSPNAP00000000501	906 (aa)	XP_017579315	UPI000814A0D6

Gene Model

Click here to download ENSPNAG00000000295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000000295's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000000295	rad54b	62	32.028	ENSPNAG00000006556	ercc6l	50	31.904
ENSPNAG00000000295	rad54b	58	30.476	ENSPNAG00000010099	smarcad1b	54	30.930
ENSPNAG00000000295	rad54b	77	44.529	ENSPNAG00000012483	rad54l	86	44.140
ENSPNAG00000000295	rad54b	58	30.710	ENSPNAG00000001663	smarcad1a	50	31.599

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000000295	rad54b	86	57.666	ENSG00000265817	FSBP	100	58.209	Homo_sapiens
ENSPNAG00000000295	rad54b	99	54.448	ENSG00000197275	RAD54B	100	54.448	Homo_sapiens
ENSPNAG00000000295	rad54b	99	53.888	ENSAMEG00000005834	-	99	53.888	Ailuropoda_melanoleuca
ENSPNAG00000000295	rad54b	99	63.442	ENSACIG00000013005	rad54b	99	63.442	Amphilophus_citrinellus
ENSPNAG00000000295	rad54b	99	63.023	ENSAOCG00000008523	rad54b	99	63.130	Amphiprion_ocellaris
ENSPNAG00000000295	rad54b	99	62.258	ENSAPEG00000001673	rad54b	99	62.258	Amphiprion_percula
ENSPNAG00000000295	rad54b	99	63.605	ENSATEG00000001527	rad54b	99	63.605	Anabas_testudineus
ENSPNAG00000000295	rad54b	96	70.000	ENSAPLG00000014366	-	99	56.961	Anas_platyrhynchos
ENSPNAG00000000295	rad54b	93	59.217	ENSACAG00000003671	-	98	59.698	Anolis_carolinensis
ENSPNAG00000000295	rad54b	76	58.410	ENSANAG00000019528	-	100	58.626	Aotus_nancymaae
ENSPNAG00000000295	rad54b	99	65.167	ENSACLG00000007826	rad54b	99	65.744	Astatotilapia_calliptera
ENSPNAG00000000295	rad54b	92	87.097	ENSAMXG00000039985	rad54b	95	87.706	Astyanax_mexicanus
ENSPNAG00000000295	rad54b	99	53.706	ENSBTAG00000000632	RAD54B	99	53.706	Bos_taurus
ENSPNAG00000000295	rad54b	85	36.240	WBGene00013792	Y116A8C.13	85	36.255	Caenorhabditis_elegans
ENSPNAG00000000295	rad54b	100	53.970	ENSCJAG00000000080	-	99	58.095	Callithrix_jacchus
ENSPNAG00000000295	rad54b	99	53.946	ENSCAFG00000009179	RAD54B	99	53.946	Canis_familiaris
ENSPNAG00000000295	rad54b	99	54.054	ENSCAFG00020012084	-	99	54.054	Canis_lupus_dingo
ENSPNAG00000000295	rad54b	99	53.598	ENSCHIG00000008230	-	99	53.598	Capra_hircus
ENSPNAG00000000295	rad54b	99	54.418	ENSTSYG00000013234	-	99	54.418	Carlito_syrichta
ENSPNAG00000000295	rad54b	99	54.295	ENSCPOG00000011643	-	99	54.295	Cavia_porcellus
ENSPNAG00000000295	rad54b	99	54.028	ENSCCAG00000011754	-	100	57.766	Cebus_capucinus
ENSPNAG00000000295	rad54b	99	54.360	ENSCATG00000030661	-	100	58.117	Cercocebus_atys
ENSPNAG00000000295	rad54b	99	54.060	ENSCLAG00000010476	-	100	54.060	Chinchilla_lanigera
ENSPNAG00000000295	rad54b	96	76.923	ENSCSAG00000012712	-	100	54.252	Chlorocebus_sabaeus
ENSPNAG00000000295	rad54b	99	56.364	ENSCPBG00000003204	-	98	58.140	Chrysemys_picta_bellii
ENSPNAG00000000295	rad54b	99	54.252	ENSCANG00000017939	-	100	57.981	Colobus_angolensis_palliatus
ENSPNAG00000000295	rad54b	99	54.615	ENSCGRG00001020184	Rad54b	99	54.615	Cricetulus_griseus_chok1gshd
ENSPNAG00000000295	rad54b	99	53.529	ENSCGRG00000016752	Rad54b	99	53.529	Cricetulus_griseus_crigri
ENSPNAG00000000295	rad54b	99	64.581	ENSCSEG00000001601	rad54b	99	64.581	Cynoglossus_semilaevis
ENSPNAG00000000295	rad54b	99	64.652	ENSCVAG00000009200	rad54b	99	64.612	Cyprinodon_variegatus
ENSPNAG00000000295	rad54b	96	80.769	ENSDARG00000092134	rad54b	100	80.835	Danio_rerio
ENSPNAG00000000295	rad54b	99	54.081	ENSDNOG00000015535	-	99	54.081	Dasypus_novemcinctus
ENSPNAG00000000295	rad54b	99	55.000	ENSDORG00000002492	Rad54b	99	55.114	Dipodomys_ordii
ENSPNAG00000000295	rad54b	86	56.064	ENSETEG00000010605	-	100	56.064	Echinops_telfairi
ENSPNAG00000000295	rad54b	99	47.979	ENSEBUG00000009104	rad54b	98	47.831	Eptatretus_burgeri
ENSPNAG00000000295	rad54b	93	57.576	ENSEASG00005004021	-	89	57.683	Equus_asinus_asinus
ENSPNAG00000000295	rad54b	99	53.341	ENSECAG00000021949	-	99	53.341	Equus_caballus
ENSPNAG00000000295	rad54b	79	80.769	ENSEEUG00000008056	-	73	80.769	Erinaceus_europaeus
ENSPNAG00000000295	rad54b	99	62.830	ENSELUG00000009287	rad54b	99	62.830	Esox_lucius
ENSPNAG00000000295	rad54b	99	53.994	ENSFCAG00000015513	-	99	58.912	Felis_catus
ENSPNAG00000000295	rad54b	96	70.000	ENSFALG00000005467	-	89	70.000	Ficedula_albicollis
ENSPNAG00000000295	rad54b	99	53.622	ENSFDAG00000020541	-	99	53.622	Fukomys_damarensis
ENSPNAG00000000295	rad54b	92	67.939	ENSFHEG00000014382	rad54b	86	68.568	Fundulus_heteroclitus
ENSPNAG00000000295	rad54b	92	65.918	ENSGMOG00000014774	rad54b	98	67.168	Gadus_morhua
ENSPNAG00000000295	rad54b	97	70.000	ENSGALG00000043597	RAD54B	99	56.137	Gallus_gallus
ENSPNAG00000000295	rad54b	99	66.040	ENSGAFG00000007901	rad54b	99	66.040	Gambusia_affinis
ENSPNAG00000000295	rad54b	99	62.420	ENSGACG00000009128	rad54b	99	62.420	Gasterosteus_aculeatus
ENSPNAG00000000295	rad54b	99	56.670	ENSGAGG00000018747	-	99	56.670	Gopherus_agassizii
ENSPNAG00000000295	rad54b	99	54.644	ENSGGOG00000023516	-	99	54.644	Gorilla_gorilla
ENSPNAG00000000295	rad54b	99	63.791	ENSHBUG00000016017	rad54b	99	63.791	Haplochromis_burtoni
ENSPNAG00000000295	rad54b	99	53.011	ENSHGLG00000008263	RAD54B	99	53.011	Heterocephalus_glaber_female
ENSPNAG00000000295	rad54b	99	52.350	ENSHGLG00100008108	-	99	52.350	Heterocephalus_glaber_male
ENSPNAG00000000295	rad54b	99	60.242	ENSHCOG00000004764	rad54b	99	61.333	Hippocampus_comes
ENSPNAG00000000295	rad54b	99	77.244	ENSIPUG00000018531	rad54b	99	77.244	Ictalurus_punctatus
ENSPNAG00000000295	rad54b	99	53.747	ENSSTOG00000010791	-	99	53.747	Ictidomys_tridecemlineatus
ENSPNAG00000000295	rad54b	99	54.144	ENSJJAG00000010314	Rad54b	99	54.144	Jaculus_jaculus
ENSPNAG00000000295	rad54b	99	65.100	ENSKMAG00000004744	rad54b	99	65.100	Kryptolebias_marmoratus
ENSPNAG00000000295	rad54b	88	61.835	ENSLACG00000000859	-	100	62.500	Latimeria_chalumnae
ENSPNAG00000000295	rad54b	100	60.293	ENSLOCG00000010100	rad54b	98	65.036	Lepisosteus_oculatus
ENSPNAG00000000295	rad54b	92	56.085	ENSLAFG00000015315	-	97	56.446	Loxodonta_africana
ENSPNAG00000000295	rad54b	99	54.360	ENSMFAG00000031629	-	100	58.117	Macaca_fascicularis
ENSPNAG00000000295	rad54b	99	54.360	ENSMMUG00000005659	-	100	54.360	Macaca_mulatta
ENSPNAG00000000295	rad54b	99	54.418	ENSMNEG00000016408	-	100	54.418	Macaca_nemestrina
ENSPNAG00000000295	rad54b	99	54.624	ENSMLEG00000006946	-	100	54.624	Mandrillus_leucophaeus
ENSPNAG00000000295	rad54b	99	62.245	ENSMAMG00000012269	rad54b	99	62.018	Mastacembelus_armatus
ENSPNAG00000000295	rad54b	99	63.685	ENSMZEG00005005281	rad54b	94	68.979	Maylandia_zebra
ENSPNAG00000000295	rad54b	97	73.333	ENSMGAG00000012024	-	89	73.333	Meleagris_gallopavo
ENSPNAG00000000295	rad54b	99	54.048	ENSMAUG00000013586	Rad54b	99	54.048	Mesocricetus_auratus
ENSPNAG00000000295	rad54b	99	53.669	ENSMICG00000000754	-	99	53.669	Microcebus_murinus
ENSPNAG00000000295	rad54b	99	53.166	ENSMOCG00000020035	Rad54b	99	53.493	Microtus_ochrogaster
ENSPNAG00000000295	rad54b	99	62.585	ENSMMOG00000003394	rad54b	99	62.585	Mola_mola
ENSPNAG00000000295	rad54b	93	57.465	ENSMODG00000007343	-	98	57.465	Monodelphis_domestica
ENSPNAG00000000295	rad54b	75	68.239	ENSMALG00000001520	rad54b	99	68.239	Monopterus_albus
ENSPNAG00000000295	rad54b	99	54.031	MGP_CAROLIEiJ_G0025810	Rad54b	99	54.031	Mus_caroli
ENSPNAG00000000295	rad54b	99	53.392	ENSMUSG00000078773	Rad54b	99	53.435	Mus_musculus
ENSPNAG00000000295	rad54b	99	53.552	MGP_PahariEiJ_G0023933	Rad54b	99	53.552	Mus_pahari
ENSPNAG00000000295	rad54b	99	53.712	MGP_SPRETEiJ_G0026758	Rad54b	99	53.754	Mus_spretus
ENSPNAG00000000295	rad54b	93	57.935	ENSMPUG00000008878	-	99	57.862	Mustela_putorius_furo
ENSPNAG00000000295	rad54b	99	54.536	ENSMLUG00000008953	-	99	54.536	Myotis_lucifugus
ENSPNAG00000000295	rad54b	99	53.152	ENSNGAG00000017537	Rad54b	99	53.152	Nannospalax_galili
ENSPNAG00000000295	rad54b	99	65.353	ENSNBRG00000013394	rad54b	99	65.933	Neolamprologus_brichardi
ENSPNAG00000000295	rad54b	99	53.912	ENSNLEG00000003062	-	99	57.938	Nomascus_leucogenys
ENSPNAG00000000295	rad54b	76	60.358	ENSMEUG00000012426	-	70	60.358	Notamacropus_eugenii
ENSPNAG00000000295	rad54b	85	67.442	ENSODEG00000002650	-	97	67.442	Octodon_degus
ENSPNAG00000000295	rad54b	99	54.298	ENSODEG00000019564	-	99	54.298	Octodon_degus
ENSPNAG00000000295	rad54b	99	63.675	ENSONIG00000006067	rad54b	99	63.675	Oreochromis_niloticus
ENSPNAG00000000295	rad54b	88	59.552	ENSOANG00000011348	-	99	59.552	Ornithorhynchus_anatinus
ENSPNAG00000000295	rad54b	99	54.772	ENSOCUG00000016478	-	99	54.772	Oryctolagus_cuniculus
ENSPNAG00000000295	rad54b	99	62.062	ENSORLG00000008918	rad54b	99	69.706	Oryzias_latipes
ENSPNAG00000000295	rad54b	75	68.934	ENSORLG00020012171	rad54b	99	69.706	Oryzias_latipes_hni
ENSPNAG00000000295	rad54b	99	62.025	ENSORLG00015018536	rad54b	99	62.025	Oryzias_latipes_hsok
ENSPNAG00000000295	rad54b	90	68.270	ENSOMEG00000004345	rad54b	99	68.475	Oryzias_melastigma
ENSPNAG00000000295	rad54b	99	52.909	ENSOGAG00000007854	-	99	52.909	Otolemur_garnettii
ENSPNAG00000000295	rad54b	93	57.935	ENSOARG00000007691	-	97	58.093	Ovis_aries
ENSPNAG00000000295	rad54b	99	53.162	ENSPPAG00000029572	-	100	53.162	Pan_paniscus
ENSPNAG00000000295	rad54b	99	53.887	ENSPPRG00000007571	-	99	59.048	Panthera_pardus
ENSPNAG00000000295	rad54b	85	58.390	ENSPTIG00000012670	-	99	59.048	Panthera_tigris_altaica
ENSPNAG00000000295	rad54b	99	54.341	ENSPTRG00000020427	-	100	58.073	Pan_troglodytes
ENSPNAG00000000295	rad54b	99	54.360	ENSPANG00000019566	-	100	54.360	Papio_anubis
ENSPNAG00000000295	rad54b	99	63.215	ENSPKIG00000014974	rad54b	99	63.215	Paramormyrops_kingsleyae
ENSPNAG00000000295	rad54b	96	70.000	ENSPSIG00000002383	-	89	70.000	Pelodiscus_sinensis
ENSPNAG00000000295	rad54b	99	53.813	ENSPEMG00000012133	Rad54b	99	53.813	Peromyscus_maniculatus_bairdii
ENSPNAG00000000295	rad54b	93	59.675	ENSPMAG00000002916	rad54b	99	60.399	Petromyzon_marinus
ENSPNAG00000000295	rad54b	93	59.339	ENSPCIG00000020151	-	92	59.339	Phascolarctos_cinereus
ENSPNAG00000000295	rad54b	99	63.330	ENSPFOG00000023411	rad54b	99	63.330	Poecilia_formosa
ENSPNAG00000000295	rad54b	99	63.330	ENSPLAG00000010430	rad54b	99	63.330	Poecilia_latipinna
ENSPNAG00000000295	rad54b	99	66.036	ENSPMEG00000016873	rad54b	99	66.036	Poecilia_mexicana
ENSPNAG00000000295	rad54b	99	64.908	ENSPREG00000018443	rad54b	99	64.908	Poecilia_reticulata
ENSPNAG00000000295	rad54b	99	54.126	ENSPPYG00000018750	-	100	54.126	Pongo_abelii
ENSPNAG00000000295	rad54b	99	54.077	ENSPCOG00000026845	-	99	58.038	Propithecus_coquereli
ENSPNAG00000000295	rad54b	87	56.933	ENSPVAG00000000261	-	86	57.923	Pteropus_vampyrus
ENSPNAG00000000295	rad54b	93	67.213	ENSPNYG00000018303	rad54b	96	67.844	Pundamilia_nyererei
ENSPNAG00000000295	rad54b	99	53.762	ENSRNOG00000039949	Rad54b	99	53.980	Rattus_norvegicus
ENSPNAG00000000295	rad54b	99	54.252	ENSRBIG00000020419	-	100	54.252	Rhinopithecus_bieti
ENSPNAG00000000295	rad54b	99	54.144	ENSRROG00000039897	-	100	54.144	Rhinopithecus_roxellana
ENSPNAG00000000295	rad54b	92	34.943	YBR073W	RDH54	90	35.084	Saccharomyces_cerevisiae
ENSPNAG00000000295	rad54b	99	53.598	ENSSBOG00000028501	-	100	53.598	Saimiri_boliviensis_boliviensis
ENSPNAG00000000295	rad54b	99	55.209	ENSSHAG00000017038	-	99	55.209	Sarcophilus_harrisii
ENSPNAG00000000295	rad54b	68	70.228	ENSSFOG00015008483	rad54b	90	70.228	Scleropages_formosus
ENSPNAG00000000295	rad54b	99	64.576	ENSSMAG00000018659	rad54b	99	64.576	Scophthalmus_maximus
ENSPNAG00000000295	rad54b	96	61.714	ENSSDUG00000001122	rad54b	96	62.054	Seriola_dumerili
ENSPNAG00000000295	rad54b	99	61.368	ENSSLDG00000013787	rad54b	99	61.700	Seriola_lalandi_dorsalis
ENSPNAG00000000295	rad54b	99	56.040	ENSSPUG00000016497	-	99	56.040	Sphenodon_punctatus
ENSPNAG00000000295	rad54b	99	63.503	ENSSPAG00000012800	rad54b	99	63.503	Stegastes_partitus
ENSPNAG00000000295	rad54b	99	54.013	ENSSSCG00000006101	-	98	58.521	Sus_scrofa
ENSPNAG00000000295	rad54b	99	56.959	ENSTGUG00000011880	-	99	56.959	Taeniopygia_guttata
ENSPNAG00000000295	rad54b	99	61.506	ENSTRUG00000010015	rad54b	99	61.950	Takifugu_rubripes
ENSPNAG00000000295	rad54b	99	51.518	ENSTTRG00000006312	-	99	51.518	Tursiops_truncatus
ENSPNAG00000000295	rad54b	99	54.104	ENSUMAG00000016401	-	99	54.104	Ursus_maritimus
ENSPNAG00000000295	rad54b	99	54.113	ENSVPAG00000003157	-	99	54.113	Vicugna_pacos
ENSPNAG00000000295	rad54b	97	70.000	ENSXETG00000025924	rad54b	99	51.066	Xenopus_tropicalis
ENSPNAG00000000295	rad54b	99	65.162	ENSXMAG00000013141	rad54b	99	65.162	Xiphophorus_maculatus