EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000000439 (Gene tree)
Gene ID: 108424173
Gene Symbol: hnrnph1
Alias: zgc:77712
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 10520 bases
Position: chrKV575307.1:390892-401411
Accession: 108424173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000023208	zf-RNPHF	PF08080.12	5.4e-07	1	1
ENSPNAP00000023211	zf-RNPHF	PF08080.12	6.7e-07	1	1
ENSPNAP00000023208	RRM_1	PF00076.22	2.3e-33	1	3
ENSPNAP00000023208	RRM_1	PF00076.22	2.3e-33	2	3
ENSPNAP00000023208	RRM_1	PF00076.22	2.3e-33	3	3
ENSPNAP00000023211	RRM_1	PF00076.22	2.8e-33	1	3
ENSPNAP00000023211	RRM_1	PF00076.22	2.8e-33	2	3
ENSPNAP00000023211	RRM_1	PF00076.22	2.8e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000013217	-	1191	-	ENSPNAP00000023208	396 (aa)	-	-
ENSPNAT00000013207	-	4381	XM_017691994	ENSPNAP00000023211	409 (aa)	XP_017547483	UPI00081444A0

Gene Model

Click here to download ENSPNAG00000000439's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000000439's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000000439	hnrnph1	85	44.048	ENSPNAG00000014912	grsf1	72	45.201
ENSPNAG00000000439	hnrnph1	100	86.441	ENSPNAG00000002784	hnrnph1l	98	87.080
ENSPNAG00000000439	hnrnph1	97	59.299	ENSPNAG00000000466	hnrnph3	91	59.128

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000000439	hnrnph1	100	86.165	ENSAPOG00000016614	hnrnph1	100	83.738	Acanthochromis_polyacanthus
ENSPNAG00000000439	hnrnph1	99	84.733	ENSACIG00000008964	hnrnph1	99	87.277	Amphilophus_citrinellus
ENSPNAG00000000439	hnrnph1	100	86.165	ENSAOCG00000008372	hnrnph1	100	83.981	Amphiprion_ocellaris
ENSPNAG00000000439	hnrnph1	100	85.922	ENSAPEG00000012980	hnrnph1	100	83.738	Amphiprion_percula
ENSPNAG00000000439	hnrnph1	100	85.922	ENSATEG00000002792	hnrnph1	100	83.738	Anabas_testudineus
ENSPNAG00000000439	hnrnph1	99	73.684	ENSACAG00000016323	-	98	71.523	Anolis_carolinensis
ENSPNAG00000000439	hnrnph1	90	85.326	ENSACLG00000003313	hnrnph1	92	86.842	Astatotilapia_calliptera
ENSPNAG00000000439	hnrnph1	100	98.778	ENSAMXG00000002483	hnrnph1	100	98.778	Astyanax_mexicanus
ENSPNAG00000000439	hnrnph1	98	85.347	ENSAMXG00000030703	hnrnph1l	83	85.347	Astyanax_mexicanus
ENSPNAG00000000439	hnrnph1	100	87.136	ENSCSEG00000015891	hnrnph1	100	86.408	Cynoglossus_semilaevis
ENSPNAG00000000439	hnrnph1	100	84.709	ENSCVAG00000014097	hnrnph1	100	82.524	Cyprinodon_variegatus
ENSPNAG00000000439	hnrnph1	100	93.888	ENSDARG00000040881	hnrnph1	100	91.241	Danio_rerio
ENSPNAG00000000439	hnrnph1	98	88.144	ENSDARG00000005551	hnrnph1l	100	85.437	Danio_rerio
ENSPNAG00000000439	hnrnph1	97	83.805	ENSELUG00000021437	-	99	87.863	Esox_lucius
ENSPNAG00000000439	hnrnph1	100	81.265	ENSELUG00000006715	hnrnph1	94	86.480	Esox_lucius
ENSPNAG00000000439	hnrnph1	100	84.709	ENSFHEG00000008474	hnrnph1	100	82.524	Fundulus_heteroclitus
ENSPNAG00000000439	hnrnph1	98	83.000	ENSGMOG00000006782	hnrnph1	98	82.500	Gadus_morhua
ENSPNAG00000000439	hnrnph1	100	84.951	ENSGAFG00000006280	hnrnph1	100	82.767	Gambusia_affinis
ENSPNAG00000000439	hnrnph1	100	83.863	ENSGACG00000018352	hnrnph1	99	81.418	Gasterosteus_aculeatus
ENSPNAG00000000439	hnrnph1	89	86.501	ENSHBUG00000010547	hnrnph1	93	86.842	Haplochromis_burtoni
ENSPNAG00000000439	hnrnph1	98	78.827	ENSHCOG00000004513	hnrnph1	100	78.118	Hippocampus_comes
ENSPNAG00000000439	hnrnph1	98	84.062	ENSIPUG00000024047	hnrnph1l	95	84.238	Ictalurus_punctatus
ENSPNAG00000000439	hnrnph1	100	95.599	ENSIPUG00000018262	hnrnph1	100	95.599	Ictalurus_punctatus
ENSPNAG00000000439	hnrnph1	98	86.822	ENSKMAG00000018802	hnrnph1	100	82.410	Kryptolebias_marmoratus
ENSPNAG00000000439	hnrnph1	100	85.680	ENSLBEG00000027811	hnrnph1	100	83.495	Labrus_bergylta
ENSPNAG00000000439	hnrnph1	98	82.064	ENSLOCG00000012510	hnrnph1	100	75.214	Lepisosteus_oculatus
ENSPNAG00000000439	hnrnph1	99	54.861	ENSMMUG00000017392	-	98	52.546	Macaca_mulatta
ENSPNAG00000000439	hnrnph1	99	54.861	ENSMNEG00000030544	-	98	52.546	Macaca_nemestrina
ENSPNAG00000000439	hnrnph1	92	83.646	ENSMAMG00000011478	hnrnph1	94	86.080	Mastacembelus_armatus
ENSPNAG00000000439	hnrnph1	100	85.922	ENSMZEG00005009791	hnrnph1	98	87.855	Maylandia_zebra
ENSPNAG00000000439	hnrnph1	99	83.376	ENSMMOG00000009064	hnrnph1	99	85.934	Mola_mola
ENSPNAG00000000439	hnrnph1	78	53.293	ENSMODG00000002200	-	99	51.351	Monodelphis_domestica
ENSPNAG00000000439	hnrnph1	89	86.981	ENSMALG00000003999	hnrnph1	95	86.667	Monopterus_albus
ENSPNAG00000000439	hnrnph1	89	86.501	ENSNBRG00000015406	hnrnph1	93	86.842	Neolamprologus_brichardi
ENSPNAG00000000439	hnrnph1	100	85.680	ENSONIG00000017754	hnrnph1	98	87.597	Oreochromis_niloticus
ENSPNAG00000000439	hnrnph1	100	83.732	ENSORLG00000006932	hnrnph1	100	81.579	Oryzias_latipes
ENSPNAG00000000439	hnrnph1	100	83.732	ENSORLG00020007881	hnrnph1	100	81.340	Oryzias_latipes_hni
ENSPNAG00000000439	hnrnph1	100	83.732	ENSORLG00015005306	hnrnph1	100	81.579	Oryzias_latipes_hsok
ENSPNAG00000000439	hnrnph1	98	86.563	ENSOMEG00000009827	hnrnph1	99	87.335	Oryzias_melastigma
ENSPNAG00000000439	hnrnph1	98	84.539	ENSPKIG00000009532	-	100	80.876	Paramormyrops_kingsleyae
ENSPNAG00000000439	hnrnph1	100	88.835	ENSPKIG00000018203	hnrnph1l	100	87.348	Paramormyrops_kingsleyae
ENSPNAG00000000439	hnrnph1	100	84.951	ENSPMGG00000012151	hnrnph1	100	83.010	Periophthalmus_magnuspinnatus
ENSPNAG00000000439	hnrnph1	100	84.951	ENSPFOG00000004097	hnrnph1	100	82.767	Poecilia_formosa
ENSPNAG00000000439	hnrnph1	100	84.951	ENSPLAG00000011771	hnrnph1	100	82.767	Poecilia_latipinna
ENSPNAG00000000439	hnrnph1	100	85.194	ENSPMEG00000019446	hnrnph1	100	83.010	Poecilia_mexicana
ENSPNAG00000000439	hnrnph1	100	85.194	ENSPREG00000005780	hnrnph1	100	83.010	Poecilia_reticulata
ENSPNAG00000000439	hnrnph1	100	85.922	ENSPNYG00000000204	hnrnph1	98	87.855	Pundamilia_nyererei
ENSPNAG00000000439	hnrnph1	98	88.630	ENSSFOG00015022796	hnrnph1l	100	88.835	Scleropages_formosus
ENSPNAG00000000439	hnrnph1	98	89.147	ENSSFOG00015016055	-	94	89.764	Scleropages_formosus
ENSPNAG00000000439	hnrnph1	99	83.951	ENSSMAG00000007820	hnrnph1	97	86.667	Scophthalmus_maximus
ENSPNAG00000000439	hnrnph1	100	86.165	ENSSDUG00000008785	hnrnph1	100	83.981	Seriola_dumerili
ENSPNAG00000000439	hnrnph1	100	86.165	ENSSLDG00000010685	hnrnph1	100	83.981	Seriola_lalandi_dorsalis
ENSPNAG00000000439	hnrnph1	100	85.266	ENSSPAG00000009921	hnrnph1	100	83.981	Stegastes_partitus
ENSPNAG00000000439	hnrnph1	100	86.064	ENSTRUG00000020069	hnrnph1	100	84.841	Takifugu_rubripes
ENSPNAG00000000439	hnrnph1	96	76.808	ENSXETG00000018321	hnrnph1	99	72.018	Xenopus_tropicalis
ENSPNAG00000000439	hnrnph1	98	85.894	ENSXCOG00000009133	hnrnph1	98	85.930	Xiphophorus_couchianus
ENSPNAG00000000439	hnrnph1	99	84.655	ENSXMAG00000021332	hnrnph1	99	87.599	Xiphophorus_maculatus