EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000000469 (Gene tree)
Gene ID: 108424169
Gene Symbol: rack1
Alias: gnb2l1|rack1|wu:fb80d08|wu:fk65d12
Full Name: guanine nucleotide-binding protein subunit beta-2-like 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 4823 bases
Position: chrKV575307.1:359110-363932
Accession: 108424169
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000000900	eIF2A	PF08662.11	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000013101	-	702	-	ENSPNAP00000000888	233 (aa)	-	-
ENSPNAT00000013090	-	1485	XM_017691989	ENSPNAP00000000900	317 (aa)	XP_017547478	UPI0008145532

Gene Model

Click here to download ENSPNAG00000000469's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000000469's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000000469	rack1	98	30.374	ENSPNAG00000024152	wdr5	88	30.374
ENSPNAG00000000469	rack1	97	30.000	ENSPNAG00000000697	prpf4	60	30.000
ENSPNAG00000000469	rack1	68	31.667	ENSPNAG00000010142	pex7	77	31.667
ENSPNAG00000000469	rack1	98	34.109	ENSPNAG00000017527	tbl3	80	34.109
ENSPNAG00000000469	rack1	98	31.200	ENSPNAG00000026557	POC1B	64	31.200

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000000469	rack1	96	83.938	ENSTSYG00000033831	-	100	68.139	Carlito_syrichta
ENSPNAG00000000469	rack1	100	95.899	ENSMAMG00000007841	rack1	100	95.899	Mastacembelus_armatus
ENSPNAG00000000469	rack1	100	95.584	ENSPFOG00000008165	rack1	98	95.584	Poecilia_formosa
ENSPNAG00000000469	rack1	100	95.584	ENSPMEG00000019993	rack1	100	95.584	Poecilia_mexicana
ENSPNAG00000000469	rack1	100	95.584	ENSPREG00000004039	rack1	100	95.584	Poecilia_reticulata
ENSPNAG00000000469	rack1	100	94.953	ENSSMAG00000003589	rack1	100	94.953	Scophthalmus_maximus
ENSPNAG00000000469	rack1	100	92.744	ENSTRUG00000000550	rack1	100	92.744	Takifugu_rubripes