EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000000483 (Gene tree)
Gene ID: 108442660
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 235-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 11509 bases
Position: chrKV575777.1:467208-478716
Accession: 108442660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000000922	zf-C2H2	PF00096.26	1.4e-27	1	4
ENSPNAP00000000922	zf-C2H2	PF00096.26	1.4e-27	2	4
ENSPNAP00000000922	zf-C2H2	PF00096.26	1.4e-27	3	4
ENSPNAP00000000922	zf-C2H2	PF00096.26	1.4e-27	4	4
ENSPNAP00000000922	zf-met	PF12874.7	0.00046	1	1
ENSPNAP00000000922	zf-C2H2_jaz	PF12171.8	2.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000013055	-	1388	XM_017722817	ENSPNAP00000000922	394 (aa)	XP_017578306	-

Gene Model

Click here to download ENSPNAG00000000483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000000483's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000000483	-	71	53.383	ENSPNAG00000012206	-	92	53.383
ENSPNAG00000000483	-	53	54.676	ENSPNAG00000016478	-	98	54.676
ENSPNAG00000000483	-	57	54.962	ENSPNAG00000002209	-	95	54.962
ENSPNAG00000000483	-	50	53.333	ENSPNAG00000007265	-	87	54.867
ENSPNAG00000000483	-	58	45.455	ENSPNAG00000006821	-	89	45.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000000483	-	100	62.927	ENSAMXG00000037695	-	100	62.927	Astyanax_mexicanus
ENSPNAG00000000483	-	87	51.966	ENSDARG00000075194	si:dkey-56e3.3	73	51.966	Danio_rerio
ENSPNAG00000000483	-	55	50.862	ENSELUG00000022942	-	58	53.465	Esox_lucius
ENSPNAG00000000483	-	61	44.186	ENSIPUG00000014394	si:dkey-7l6.3	55	44.186	Ictalurus_punctatus
ENSPNAG00000000483	-	54	46.617	ENSORLG00000028381	-	87	46.617	Oryzias_latipes
ENSPNAG00000000483	-	50	48.649	ENSORLG00000029896	-	70	48.649	Oryzias_latipes
ENSPNAG00000000483	-	53	47.101	ENSORLG00000027974	-	70	47.101	Oryzias_latipes
ENSPNAG00000000483	-	53	49.624	ENSORLG00020009184	-	80	49.624	Oryzias_latipes_hni
ENSPNAG00000000483	-	89	44.030	ENSORLG00020007967	-	77	48.889	Oryzias_latipes_hni
ENSPNAG00000000483	-	91	46.552	ENSORLG00015011496	-	94	46.552	Oryzias_latipes_hsok
ENSPNAG00000000483	-	50	45.968	ENSORLG00015012826	-	55	45.968	Oryzias_latipes_hsok
ENSPNAG00000000483	-	68	48.598	ENSORLG00015019853	-	71	48.598	Oryzias_latipes_hsok
ENSPNAG00000000483	-	67	47.101	ENSOMEG00000010398	-	93	47.101	Oryzias_melastigma
ENSPNAG00000000483	-	55	51.852	ENSOMEG00000005156	-	92	51.852	Oryzias_melastigma
ENSPNAG00000000483	-	57	50.376	ENSOMEG00000020951	-	87	50.376	Oryzias_melastigma
ENSPNAG00000000483	-	52	51.327	ENSOMEG00000005839	-	72	51.327	Oryzias_melastigma
ENSPNAG00000000483	-	66	53.086	ENSOMEG00000010752	-	66	53.086	Oryzias_melastigma
ENSPNAG00000000483	-	52	48.855	ENSOMEG00000020893	-	95	48.855	Oryzias_melastigma
ENSPNAG00000000483	-	51	50.000	ENSOMEG00000000196	-	89	50.000	Oryzias_melastigma
ENSPNAG00000000483	-	53	50.000	ENSOMEG00000010745	-	87	50.000	Oryzias_melastigma
ENSPNAG00000000483	-	52	45.912	ENSOMEG00000016853	-	67	45.912	Oryzias_melastigma