EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000000498 (Gene tree)
Gene ID: 108431401
Gene Symbol: -
Alias: -
Full Name: RNA-binding Raly-like protein
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 193790 bases
Position: chrKV575290.1:2292637-2486426
Accession: 108431401
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000000936	RRM_1	PF00076.22	2e-10	1	1
ENSPNAP00000023295	RRM_1	PF00076.22	2.2e-10	1	1
ENSPNAP00000023285	RRM_1	PF00076.22	2.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000013012	-	3879	XM_017704523	ENSPNAP00000023295	329 (aa)	XP_017560012	UPI0008143748
ENSPNAT00000013017	-	3831	-	ENSPNAP00000000936	313 (aa)	-	-
ENSPNAT00000013024	-	3937	XM_017704514	ENSPNAP00000023285	330 (aa)	XP_017560003	UPI0008142F1C

Gene Model

Click here to download ENSPNAG00000000498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000000498's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000000498	-	88	54.483	ENSPNAG00000011812	raly	99	54.483
ENSPNAG00000000498	-	88	67.698	ENSPNAG00000026098	-	100	67.698
ENSPNAG00000000498	-	67	55.947	ENSPNAG00000015686	hnrnpc	74	54.386
ENSPNAG00000000498	-	70	51.915	ENSPNAG00000019200	zgc:55733	90	48.561

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000000498	-	88	72.297	ENSAPOG00000008744	-	100	71.959	Acanthochromis_polyacanthus
ENSPNAG00000000498	-	86	67.586	ENSACIG00000007143	-	97	67.586	Amphilophus_citrinellus
ENSPNAG00000000498	-	90	87.919	ENSAOCG00000001605	-	100	89.384	Amphiprion_ocellaris
ENSPNAG00000000498	-	88	72.391	ENSAOCG00000023599	-	100	72.635	Amphiprion_ocellaris
ENSPNAG00000000498	-	86	64.883	ENSATEG00000022219	-	93	69.128	Anabas_testudineus
ENSPNAG00000000498	-	68	88.889	ENSATEG00000023356	-	87	89.333	Anabas_testudineus
ENSPNAG00000000498	-	88	90.068	ENSACLG00000006949	-	100	90.068	Astatotilapia_calliptera
ENSPNAG00000000498	-	88	72.635	ENSACLG00000011720	-	100	72.881	Astatotilapia_calliptera
ENSPNAG00000000498	-	88	96.575	ENSAMXG00000019031	-	100	96.575	Astyanax_mexicanus
ENSPNAG00000000498	-	88	64.527	ENSAMXG00000032617	-	100	64.527	Astyanax_mexicanus
ENSPNAG00000000498	-	88	65.878	ENSCSEG00000014237	-	100	65.203	Cynoglossus_semilaevis
ENSPNAG00000000498	-	88	71.380	ENSCVAG00000013624	-	100	71.959	Cyprinodon_variegatus
ENSPNAG00000000498	-	88	87.713	ENSCVAG00000018104	-	100	88.055	Cyprinodon_variegatus
ENSPNAG00000000498	-	52	77.059	ENSDARG00000090292	ralyl	84	77.381	Danio_rerio
ENSPNAG00000000498	-	83	74.823	ENSELUG00000001702	-	96	75.180	Esox_lucius
ENSPNAG00000000498	-	50	77.576	ENSGMOG00000005914	-	100	77.576	Gadus_morhua
ENSPNAG00000000498	-	52	90.058	ENSGACG00000004991	-	93	90.533	Gasterosteus_aculeatus
ENSPNAG00000000498	-	91	70.684	ENSHBUG00000010040	-	100	72.635	Haplochromis_burtoni
ENSPNAG00000000498	-	88	90.068	ENSHBUG00000015412	-	100	90.068	Haplochromis_burtoni
ENSPNAG00000000498	-	88	95.890	ENSIPUG00000000507	ralyl	100	95.890	Ictalurus_punctatus
ENSPNAG00000000498	-	88	69.257	ENSKMAG00000022093	-	100	70.946	Kryptolebias_marmoratus
ENSPNAG00000000498	-	88	88.356	ENSKMAG00000018155	-	100	88.699	Kryptolebias_marmoratus
ENSPNAG00000000498	-	88	88.699	ENSLBEG00000011011	-	100	88.356	Labrus_bergylta
ENSPNAG00000000498	-	88	71.284	ENSLBEG00000012873	-	100	71.284	Labrus_bergylta
ENSPNAG00000000498	-	88	85.567	ENSLOCG00000012787	ralyl	99	85.567	Lepisosteus_oculatus
ENSPNAG00000000498	-	87	69.896	ENSMAMG00000001723	-	97	69.896	Mastacembelus_armatus
ENSPNAG00000000498	-	87	85.862	ENSMZEG00005018748	-	99	85.862	Maylandia_zebra
ENSPNAG00000000498	-	88	72.635	ENSMZEG00005024447	-	100	72.881	Maylandia_zebra
ENSPNAG00000000498	-	86	64.784	ENSMMOG00000020441	-	86	64.000	Mola_mola
ENSPNAG00000000498	-	92	71.336	ENSMALG00000019019	-	81	71.336	Monopterus_albus
ENSPNAG00000000498	-	88	88.699	ENSMALG00000012952	-	100	89.041	Monopterus_albus
ENSPNAG00000000498	-	86	68.276	ENSNBRG00000011206	-	97	68.276	Neolamprologus_brichardi
ENSPNAG00000000498	-	87	85.567	ENSNBRG00000011376	-	99	85.911	Neolamprologus_brichardi
ENSPNAG00000000498	-	88	70.270	ENSORLG00000017934	-	100	69.932	Oryzias_latipes
ENSPNAG00000000498	-	88	89.384	ENSORLG00000012719	-	100	89.726	Oryzias_latipes
ENSPNAG00000000498	-	88	69.932	ENSORLG00020000082	-	100	69.595	Oryzias_latipes_hni
ENSPNAG00000000498	-	88	89.384	ENSORLG00020004438	-	100	89.726	Oryzias_latipes_hni
ENSPNAG00000000498	-	88	89.384	ENSORLG00015004727	-	100	89.726	Oryzias_latipes_hsok
ENSPNAG00000000498	-	88	70.270	ENSORLG00015004280	-	100	69.932	Oryzias_latipes_hsok
ENSPNAG00000000498	-	88	68.919	ENSOMEG00000011821	-	100	68.919	Oryzias_melastigma
ENSPNAG00000000498	-	88	90.068	ENSOMEG00000001170	-	100	90.411	Oryzias_melastigma
ENSPNAG00000000498	-	88	79.181	ENSPKIG00000015926	-	100	79.181	Paramormyrops_kingsleyae
ENSPNAG00000000498	-	71	78.814	ENSPMGG00000014481	-	98	78.723	Periophthalmus_magnuspinnatus
ENSPNAG00000000498	-	87	66.102	ENSPMGG00000009532	-	99	66.102	Periophthalmus_magnuspinnatus
ENSPNAG00000000498	-	86	68.227	ENSPFOG00000006120	-	99	68.792	Poecilia_formosa
ENSPNAG00000000498	-	86	88.112	ENSPLAG00000011323	ralyl	100	88.462	Poecilia_latipinna
ENSPNAG00000000498	-	85	68.015	ENSPLAG00000009877	-	76	67.883	Poecilia_latipinna
ENSPNAG00000000498	-	86	88.112	ENSPMEG00000023847	ralyl	100	88.462	Poecilia_mexicana
ENSPNAG00000000498	-	85	68.015	ENSPMEG00000013624	-	80	67.883	Poecilia_mexicana
ENSPNAG00000000498	-	86	86.667	ENSPREG00000001956	ralyl	100	86.667	Poecilia_reticulata
ENSPNAG00000000498	-	86	71.181	ENSPREG00000013805	-	100	67.405	Poecilia_reticulata
ENSPNAG00000000498	-	87	85.862	ENSPNYG00000003548	-	99	85.862	Pundamilia_nyererei
ENSPNAG00000000498	-	86	68.276	ENSPNYG00000008772	-	97	68.276	Pundamilia_nyererei
ENSPNAG00000000498	-	88	89.456	ENSSFOG00015009401	-	100	89.456	Scleropages_formosus
ENSPNAG00000000498	-	85	80.075	ENSSFOG00015004575	-	96	78.947	Scleropages_formosus
ENSPNAG00000000498	-	88	88.014	ENSSMAG00000005608	-	100	88.014	Scophthalmus_maximus
ENSPNAG00000000498	-	86	70.775	ENSSMAG00000015907	-	93	70.423	Scophthalmus_maximus
ENSPNAG00000000498	-	88	72.391	ENSSDUG00000012473	-	100	72.635	Seriola_dumerili
ENSPNAG00000000498	-	88	89.855	ENSSDUG00000007587	-	100	90.217	Seriola_dumerili
ENSPNAG00000000498	-	88	72.054	ENSSLDG00000011534	-	100	72.297	Seriola_lalandi_dorsalis
ENSPNAG00000000498	-	88	89.078	ENSSLDG00000020603	-	100	89.420	Seriola_lalandi_dorsalis
ENSPNAG00000000498	-	88	63.230	ENSSPAG00000013858	-	96	64.184	Stegastes_partitus
ENSPNAG00000000498	-	72	76.471	ENSTRUG00000003829	-	95	71.631	Takifugu_rubripes
ENSPNAG00000000498	-	86	68.259	ENSTNIG00000005594	-	99	67.577	Tetraodon_nigroviridis
ENSPNAG00000000498	-	88	72.014	ENSXETG00000017729	ralyl	99	72.696	Xenopus_tropicalis
ENSPNAG00000000498	-	86	85.374	ENSXCOG00000015156	-	93	85.714	Xiphophorus_couchianus
ENSPNAG00000000498	-	88	89.493	ENSXMAG00000008396	-	100	89.855	Xiphophorus_maculatus
ENSPNAG00000000498	-	88	72.054	ENSXMAG00000007614	-	100	72.297	Xiphophorus_maculatus