EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000000509 (Gene tree)
Gene ID: 108432106
Gene Symbol: mbd4
Alias: -
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 8279 bases
Position: chrKV575399.1:234881-243159
Accession: 108432106
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000000962	MBD	PF01429.19	4.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000012968	-	1512	XM_017705718	ENSPNAP00000000962	417 (aa)	XP_017561207	UPI0008147A3E

Gene Model

Click here to download ENSPNAG00000000509's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000000509's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000000509	mbd4	72	56.667	ENSG00000129071	MBD4	65	71.345	Homo_sapiens
ENSPNAG00000000509	mbd4	95	67.164	ENSAMXG00000017271	mbd4	93	65.672	Astyanax_mexicanus
ENSPNAG00000000509	mbd4	78	49.084	ENSEEUG00000011459	MBD4	50	60.638	Erinaceus_europaeus
ENSPNAG00000000509	mbd4	63	68.137	ENSGMOG00000013830	mbd4	55	68.317	Gadus_morhua
ENSPNAG00000000509	mbd4	80	41.311	ENSGACG00000001970	-	80	40.997	Gasterosteus_aculeatus
ENSPNAG00000000509	mbd4	95	45.752	ENSLBEG00000005669	MBD4	53	71.958	Labrus_bergylta
ENSPNAG00000000509	mbd4	59	70.681	ENSLOCG00000013054	MBD4	51	70.681	Lepisosteus_oculatus
ENSPNAG00000000509	mbd4	67	58.590	ENSMICG00000008022	MBD4	51	53.462	Microcebus_murinus
ENSPNAG00000000509	mbd4	94	47.945	ENSONIG00000017212	mbd4	100	47.489	Oreochromis_niloticus
ENSPNAG00000000509	mbd4	55	52.174	ENSOANG00000004589	-	58	52.174	Ornithorhynchus_anatinus
ENSPNAG00000000509	mbd4	65	56.281	ENSOCUG00000013006	MBD4	50	56.281	Oryctolagus_cuniculus
ENSPNAG00000000509	mbd4	93	47.235	ENSORLG00015015342	mbd4	97	46.262	Oryzias_latipes_hsok
ENSPNAG00000000509	mbd4	67	72.515	ENSPCIG00000002276	-	57	72.515	Phascolarctos_cinereus
ENSPNAG00000000509	mbd4	94	47.778	ENSPFOG00000014471	mbd4	98	47.556	Poecilia_formosa
ENSPNAG00000000509	mbd4	65	69.744	ENSSFOG00015016292	mbd4	58	69.744	Scleropages_formosus
ENSPNAG00000000509	mbd4	64	74.269	ENSSPUG00000017344	MBD4	52	74.269	Sphenodon_punctatus
ENSPNAG00000000509	mbd4	94	47.973	ENSXMAG00000021129	mbd4	98	47.321	Xiphophorus_maculatus