EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000000523 (Gene tree)
Gene ID: 108442665
Gene Symbol: tomm20a
Alias: arid4b|ch1073-321c8.1|wu:fk47b11
Full Name: AT-rich interaction domain 4B
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 58050 bases
Position: chrKV575777.1:212918-270967
Accession: 108442665
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000000987	Tudor-knot	PF11717.8	3.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000012923	-	4203	XM_017722825	ENSPNAP00000000987	1400 (aa)	XP_017578314	UPI0008148CC6

Gene Model

Click here to download ENSPNAG00000000523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000000523's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000000523	tomm20a	81	72.340	ENSG00000054267	ARID4B	91	73.522	Homo_sapiens
ENSPNAG00000000523	tomm20a	92	68.473	ENSAPOG00000010823	tomm20a	100	68.318	Acanthochromis_polyacanthus
ENSPNAG00000000523	tomm20a	84	82.904	ENSACIG00000006313	tomm20a	100	82.904	Amphilophus_citrinellus
ENSPNAG00000000523	tomm20a	92	67.813	ENSAOCG00000003330	tomm20a	100	67.817	Amphiprion_ocellaris
ENSPNAG00000000523	tomm20a	92	67.890	ENSAPEG00000024018	tomm20a	100	67.744	Amphiprion_percula
ENSPNAG00000000523	tomm20a	92	66.616	ENSATEG00000014930	tomm20a	100	67.447	Anabas_testudineus
ENSPNAG00000000523	tomm20a	93	52.319	ENSAPLG00000004422	ARID4B	100	51.997	Anas_platyrhynchos
ENSPNAG00000000523	tomm20a	84	73.882	ENSACLG00000023521	tomm20a	100	73.176	Astatotilapia_calliptera
ENSPNAG00000000523	tomm20a	88	81.124	ENSAMXG00000003657	tomm20a	99	82.530	Astyanax_mexicanus
ENSPNAG00000000523	tomm20a	54	47.613	ENSCPBG00000004501	ARID4B	100	52.709	Chrysemys_picta_bellii
ENSPNAG00000000523	tomm20a	92	65.031	ENSCSEG00000012928	tomm20a	100	66.264	Cynoglossus_semilaevis
ENSPNAG00000000523	tomm20a	92	66.154	ENSCVAG00000003244	tomm20a	100	66.768	Cyprinodon_variegatus
ENSPNAG00000000523	tomm20a	93	68.953	ENSDARG00000090656	tomm20a	100	70.084	Danio_rerio
ENSPNAG00000000523	tomm20a	61	52.459	ENSELUG00000018441	tomm20a	93	51.449	Esox_lucius
ENSPNAG00000000523	tomm20a	92	66.208	ENSFHEG00000003798	tomm20a	100	66.114	Fundulus_heteroclitus
ENSPNAG00000000523	tomm20a	85	63.529	ENSGMOG00000018747	tomm20a	93	64.375	Gadus_morhua
ENSPNAG00000000523	tomm20a	92	65.420	ENSGACG00000004298	tomm20a	100	64.808	Gasterosteus_aculeatus
ENSPNAG00000000523	tomm20a	92	65.798	ENSHBUG00000020369	tomm20a	100	66.239	Haplochromis_burtoni
ENSPNAG00000000523	tomm20a	87	74.255	ENSHCOG00000010376	tomm20a	96	81.884	Hippocampus_comes
ENSPNAG00000000523	tomm20a	93	76.245	ENSIPUG00000014234	arid4b	100	75.939	Ictalurus_punctatus
ENSPNAG00000000523	tomm20a	93	51.173	ENSJJAG00000021368	Arid4b	100	52.898	Jaculus_jaculus
ENSPNAG00000000523	tomm20a	84	62.857	ENSKMAG00000010987	tomm20a	99	71.190	Kryptolebias_marmoratus
ENSPNAG00000000523	tomm20a	93	59.671	ENSLOCG00000015899	tomm20a	100	61.533	Lepisosteus_oculatus
ENSPNAG00000000523	tomm20a	51	57.895	ENSLAFG00000014295	ARID4B	99	52.485	Loxodonta_africana
ENSPNAG00000000523	tomm20a	87	64.749	ENSMAMG00000017134	tomm20a	99	65.937	Mastacembelus_armatus
ENSPNAG00000000523	tomm20a	92	65.721	ENSMZEG00005009879	tomm20a	100	66.012	Maylandia_zebra
ENSPNAG00000000523	tomm20a	86	78.139	ENSMMOG00000000561	tomm20a	97	83.215	Mola_mola
ENSPNAG00000000523	tomm20a	92	66.462	ENSMALG00000005205	tomm20a	100	68.175	Monopterus_albus
ENSPNAG00000000523	tomm20a	84	81.542	ENSNBRG00000019684	tomm20a	100	82.243	Neolamprologus_brichardi
ENSPNAG00000000523	tomm20a	93	65.234	ENSORLG00000012510	tomm20a	100	64.087	Oryzias_latipes
ENSPNAG00000000523	tomm20a	84	80.482	ENSORLG00020013988	tomm20a	99	81.205	Oryzias_latipes_hni
ENSPNAG00000000523	tomm20a	84	80.630	ENSORLG00015022835	tomm20a	99	81.840	Oryzias_latipes_hsok
ENSPNAG00000000523	tomm20a	93	64.834	ENSOMEG00000000521	tomm20a	100	65.185	Oryzias_melastigma
ENSPNAG00000000523	tomm20a	51	59.254	ENSPTIG00000012520	ARID4B	100	53.635	Panthera_tigris_altaica
ENSPNAG00000000523	tomm20a	86	69.231	ENSPCIG00000029756	ARID4B	100	52.694	Phascolarctos_cinereus
ENSPNAG00000000523	tomm20a	92	65.651	ENSPFOG00000019430	tomm20a	100	66.116	Poecilia_formosa
ENSPNAG00000000523	tomm20a	92	65.677	ENSPLAG00000010554	tomm20a	100	67.019	Poecilia_latipinna
ENSPNAG00000000523	tomm20a	92	64.206	ENSPMEG00000003093	tomm20a	100	64.238	Poecilia_mexicana
ENSPNAG00000000523	tomm20a	92	66.438	ENSPREG00000007996	tomm20a	100	67.322	Poecilia_reticulata
ENSPNAG00000000523	tomm20a	93	50.404	ENSPVAG00000015159	ARID4B	100	51.566	Pteropus_vampyrus
ENSPNAG00000000523	tomm20a	92	64.148	ENSPNYG00000013988	tomm20a	100	64.286	Pundamilia_nyererei
ENSPNAG00000000523	tomm20a	83	70.743	ENSRBIG00000042029	ARID4B	100	48.669	Rhinopithecus_bieti
ENSPNAG00000000523	tomm20a	70	51.830	ENSSFOG00015008923	tomm20a	100	52.348	Scleropages_formosus
ENSPNAG00000000523	tomm20a	93	60.135	ENSSFOG00015000132	arid4b	100	60.784	Scleropages_formosus
ENSPNAG00000000523	tomm20a	92	64.072	ENSSMAG00000010430	tomm20a	100	65.875	Scophthalmus_maximus
ENSPNAG00000000523	tomm20a	92	67.688	ENSSDUG00000003019	tomm20a	100	68.703	Seriola_dumerili
ENSPNAG00000000523	tomm20a	92	67.762	ENSSPAG00000007358	tomm20a	100	67.696	Stegastes_partitus
ENSPNAG00000000523	tomm20a	54	59.558	ENSTRUG00000002893	tomm20a	87	59.316	Takifugu_rubripes
ENSPNAG00000000523	tomm20a	64	66.504	ENSTBEG00000003961	ARID4B	68	66.993	Tupaia_belangeri
ENSPNAG00000000523	tomm20a	92	67.283	ENSXMAG00000006538	tomm20a	100	67.347	Xiphophorus_maculatus