EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000000686 (Gene tree)
Gene ID: 108442636
Gene Symbol: sf3b4
Alias: chunp6902|fb36a04|wu:fb36a04
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 10107 bases
Position: chrKV575774.1:415329-425435
Accession: 108442636
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000023573	RRM_1	PF00076.22	3.2e-39	1	2
ENSPNAP00000023573	RRM_1	PF00076.22	3.2e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000012286	-	1815	XM_017722773	ENSPNAP00000023573	392 (aa)	XP_017578262	UPI0008148024

Gene Model

Click here to download ENSPNAG00000000686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000000686's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000000686	sf3b4	79	80.938	ENSG00000143368	SF3B4	98	96.791	Homo_sapiens
ENSPNAG00000000686	sf3b4	61	98.333	ENSAPOG00000017647	sf3b4	60	98.333	Acanthochromis_polyacanthus
ENSPNAG00000000686	sf3b4	61	96.667	ENSAMEG00000010073	SF3B4	57	96.667	Ailuropoda_melanoleuca
ENSPNAG00000000686	sf3b4	59	97.835	ENSACIG00000018455	sf3b4	68	98.261	Amphilophus_citrinellus
ENSPNAG00000000686	sf3b4	61	97.500	ENSAOCG00000019801	sf3b4	60	97.500	Amphiprion_ocellaris
ENSPNAG00000000686	sf3b4	61	97.500	ENSAPEG00000010365	sf3b4	60	97.500	Amphiprion_percula
ENSPNAG00000000686	sf3b4	61	97.500	ENSATEG00000012844	sf3b4	69	94.604	Anabas_testudineus
ENSPNAG00000000686	sf3b4	55	100.000	ENSACAG00000010019	SF3B4	55	98.253	Anolis_carolinensis
ENSPNAG00000000686	sf3b4	79	80.938	ENSANAG00000031025	SF3B4	57	96.667	Aotus_nancymaae
ENSPNAG00000000686	sf3b4	68	95.149	ENSACLG00000014260	sf3b4	60	97.917	Astatotilapia_calliptera
ENSPNAG00000000686	sf3b4	100	94.514	ENSAMXG00000008282	sf3b4	100	94.514	Astyanax_mexicanus
ENSPNAG00000000686	sf3b4	61	96.667	ENSBTAG00000012495	SF3B4	57	96.667	Bos_taurus
ENSPNAG00000000686	sf3b4	55	94.860	ENSBTAG00000012793	-	53	94.860	Bos_taurus
ENSPNAG00000000686	sf3b4	89	58.621	WBGene00004723	sap-49	55	81.690	Caenorhabditis_elegans
ENSPNAG00000000686	sf3b4	61	96.667	ENSCAFG00000011617	SF3B4	57	96.667	Canis_familiaris
ENSPNAG00000000686	sf3b4	61	96.667	ENSCAFG00020019775	SF3B4	57	96.667	Canis_lupus_dingo
ENSPNAG00000000686	sf3b4	63	65.726	ENSCHIG00000006654	-	50	74.627	Capra_hircus
ENSPNAG00000000686	sf3b4	61	96.667	ENSCHIG00000025663	-	57	96.667	Capra_hircus
ENSPNAG00000000686	sf3b4	79	80.938	ENSTSYG00000009295	SF3B4	57	96.667	Carlito_syrichta
ENSPNAG00000000686	sf3b4	61	96.667	ENSCPOG00000008267	SF3B4	57	96.667	Cavia_porcellus
ENSPNAG00000000686	sf3b4	61	95.833	ENSCCAG00000021751	-	54	95.833	Cebus_capucinus
ENSPNAG00000000686	sf3b4	79	80.938	ENSCATG00000033114	SF3B4	57	96.667	Cercocebus_atys
ENSPNAG00000000686	sf3b4	61	96.667	ENSCLAG00000015851	SF3B4	57	96.667	Chinchilla_lanigera
ENSPNAG00000000686	sf3b4	79	80.938	ENSCSAG00000018129	SF3B4	57	96.667	Chlorocebus_sabaeus
ENSPNAG00000000686	sf3b4	55	100.000	ENSCPBG00000008041	SF3B4	55	98.253	Chrysemys_picta_bellii
ENSPNAG00000000686	sf3b4	55	90.654	ENSCING00000002337	-	57	90.610	Ciona_intestinalis
ENSPNAG00000000686	sf3b4	53	91.429	ENSCSAVG00000007809	-	89	89.820	Ciona_savignyi
ENSPNAG00000000686	sf3b4	79	80.938	ENSCANG00000035579	SF3B4	57	96.667	Colobus_angolensis_palliatus
ENSPNAG00000000686	sf3b4	61	96.667	ENSCGRG00001003590	Sf3b4	57	96.667	Cricetulus_griseus_chok1gshd
ENSPNAG00000000686	sf3b4	61	96.667	ENSCGRG00000016914	Sf3b4	57	96.667	Cricetulus_griseus_crigri
ENSPNAG00000000686	sf3b4	67	94.697	ENSCVAG00000005536	sf3b4	59	96.070	Cyprinodon_variegatus
ENSPNAG00000000686	sf3b4	61	98.333	ENSDARG00000018574	sf3b4	69	96.739	Danio_rerio
ENSPNAG00000000686	sf3b4	97	62.312	ENSDNOG00000037231	-	50	87.245	Dasypus_novemcinctus
ENSPNAG00000000686	sf3b4	59	91.379	ENSDNOG00000048908	-	56	91.379	Dasypus_novemcinctus
ENSPNAG00000000686	sf3b4	61	96.667	ENSDORG00000016366	Sf3b4	57	96.667	Dipodomys_ordii
ENSPNAG00000000686	sf3b4	61	96.667	ENSEASG00005001477	SF3B4	57	96.667	Equus_asinus_asinus
ENSPNAG00000000686	sf3b4	61	96.667	ENSECAG00000024737	SF3B4	57	96.667	Equus_caballus
ENSPNAG00000000686	sf3b4	89	88.604	ENSELUG00000012876	sf3b4	60	98.333	Esox_lucius
ENSPNAG00000000686	sf3b4	61	96.667	ENSFCAG00000010106	SF3B4	57	96.667	Felis_catus
ENSPNAG00000000686	sf3b4	61	96.667	ENSFDAG00000009286	SF3B4	57	96.667	Fukomys_damarensis
ENSPNAG00000000686	sf3b4	59	97.391	ENSGMOG00000002519	sf3b4	67	97.391	Gadus_morhua
ENSPNAG00000000686	sf3b4	55	100.000	ENSGALG00000013352	SF3B4	55	98.690	Gallus_gallus
ENSPNAG00000000686	sf3b4	67	96.212	ENSGAFG00000010181	sf3b4	61	97.917	Gambusia_affinis
ENSPNAG00000000686	sf3b4	58	99.119	ENSGACG00000003819	sf3b4	58	98.261	Gasterosteus_aculeatus
ENSPNAG00000000686	sf3b4	79	80.938	ENSGGOG00000004761	SF3B4	57	96.667	Gorilla_gorilla
ENSPNAG00000000686	sf3b4	79	67.925	ENSGGOG00000038845	-	54	89.151	Gorilla_gorilla
ENSPNAG00000000686	sf3b4	68	95.149	ENSHBUG00000002028	sf3b4	60	97.917	Haplochromis_burtoni
ENSPNAG00000000686	sf3b4	61	96.667	ENSHGLG00000012360	SF3B4	57	96.667	Heterocephalus_glaber_female
ENSPNAG00000000686	sf3b4	61	96.667	ENSHGLG00100008533	SF3B4	57	96.667	Heterocephalus_glaber_male
ENSPNAG00000000686	sf3b4	58	96.916	ENSHCOG00000003014	sf3b4	57	96.507	Hippocampus_comes
ENSPNAG00000000686	sf3b4	73	96.528	ENSIPUG00000012242	Sf3b4	72	96.528	Ictalurus_punctatus
ENSPNAG00000000686	sf3b4	61	96.667	ENSSTOG00000000684	-	57	96.667	Ictidomys_tridecemlineatus
ENSPNAG00000000686	sf3b4	60	71.429	ENSJJAG00000022500	Sf3b4	59	71.429	Jaculus_jaculus
ENSPNAG00000000686	sf3b4	95	82.850	ENSKMAG00000008154	sf3b4	62	97.531	Kryptolebias_marmoratus
ENSPNAG00000000686	sf3b4	59	97.854	ENSLBEG00000026818	sf3b4	58	98.696	Labrus_bergylta
ENSPNAG00000000686	sf3b4	61	95.000	ENSLACG00000004436	SF3B4	66	95.000	Latimeria_chalumnae
ENSPNAG00000000686	sf3b4	59	98.276	ENSLOCG00000009048	sf3b4	55	98.696	Lepisosteus_oculatus
ENSPNAG00000000686	sf3b4	79	79.385	ENSLAFG00000008531	SF3B4	56	96.667	Loxodonta_africana
ENSPNAG00000000686	sf3b4	79	80.938	ENSMFAG00000042395	SF3B4	57	96.667	Macaca_fascicularis
ENSPNAG00000000686	sf3b4	92	62.604	ENSMFAG00000039067	-	58	78.802	Macaca_fascicularis
ENSPNAG00000000686	sf3b4	79	80.938	ENSMMUG00000007256	SF3B4	57	96.667	Macaca_mulatta
ENSPNAG00000000686	sf3b4	92	62.327	ENSMNEG00000031526	-	58	78.341	Macaca_nemestrina
ENSPNAG00000000686	sf3b4	79	80.938	ENSMNEG00000031839	SF3B4	57	96.667	Macaca_nemestrina
ENSPNAG00000000686	sf3b4	79	80.938	ENSMLEG00000038667	SF3B4	57	96.667	Mandrillus_leucophaeus
ENSPNAG00000000686	sf3b4	61	98.333	ENSMAMG00000014692	sf3b4	60	98.333	Mastacembelus_armatus
ENSPNAG00000000686	sf3b4	68	95.149	ENSMZEG00005026741	sf3b4	60	97.917	Maylandia_zebra
ENSPNAG00000000686	sf3b4	55	100.000	ENSMGAG00000000653	SF3B4	55	98.690	Meleagris_gallopavo
ENSPNAG00000000686	sf3b4	61	96.667	ENSMAUG00000015266	Sf3b4	57	96.667	Mesocricetus_auratus
ENSPNAG00000000686	sf3b4	61	96.667	ENSMICG00000044961	SF3B4	57	96.667	Microcebus_murinus
ENSPNAG00000000686	sf3b4	92	73.037	ENSMOCG00000014155	-	57	94.372	Microtus_ochrogaster
ENSPNAG00000000686	sf3b4	61	96.667	ENSMOCG00000013658	-	57	96.667	Microtus_ochrogaster
ENSPNAG00000000686	sf3b4	59	98.261	ENSMMOG00000018032	sf3b4	59	98.261	Mola_mola
ENSPNAG00000000686	sf3b4	79	80.938	ENSMODG00000018767	SF3B4	57	96.667	Monodelphis_domestica
ENSPNAG00000000686	sf3b4	69	94.444	ENSMALG00000006174	sf3b4	60	97.942	Monopterus_albus
ENSPNAG00000000686	sf3b4	61	96.667	MGP_CAROLIEiJ_G0025365	Sf3b4	57	96.667	Mus_caroli
ENSPNAG00000000686	sf3b4	61	96.667	ENSMUSG00000068856	Sf3b4	57	96.667	Mus_musculus
ENSPNAG00000000686	sf3b4	61	96.667	MGP_PahariEiJ_G0026809	Sf3b4	57	96.667	Mus_pahari
ENSPNAG00000000686	sf3b4	61	96.667	MGP_SPRETEiJ_G0026309	Sf3b4	57	96.667	Mus_spretus
ENSPNAG00000000686	sf3b4	61	96.667	ENSMPUG00000005563	SF3B4	57	96.667	Mustela_putorius_furo
ENSPNAG00000000686	sf3b4	61	96.667	ENSMLUG00000010789	SF3B4	57	96.667	Myotis_lucifugus
ENSPNAG00000000686	sf3b4	79	78.462	ENSNGAG00000016337	Sf3b4	57	96.667	Nannospalax_galili
ENSPNAG00000000686	sf3b4	68	94.776	ENSNBRG00000013865	sf3b4	60	97.500	Neolamprologus_brichardi
ENSPNAG00000000686	sf3b4	99	50.118	ENSNLEG00000009693	-	99	50.118	Nomascus_leucogenys
ENSPNAG00000000686	sf3b4	99	66.332	ENSNLEG00000000537	-	58	87.826	Nomascus_leucogenys
ENSPNAG00000000686	sf3b4	90	60.165	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSPNAG00000000686	sf3b4	68	94.776	ENSONIG00000002730	sf3b4	61	97.531	Oreochromis_niloticus
ENSPNAG00000000686	sf3b4	66	71.642	ENSOANG00000004768	-	50	81.944	Ornithorhynchus_anatinus
ENSPNAG00000000686	sf3b4	61	96.667	ENSOCUG00000004614	SF3B4	57	96.667	Oryctolagus_cuniculus
ENSPNAG00000000686	sf3b4	77	88.449	ENSORLG00000003062	sf3b4	59	98.261	Oryzias_latipes
ENSPNAG00000000686	sf3b4	77	88.449	ENSORLG00020000687	sf3b4	58	98.261	Oryzias_latipes_hni
ENSPNAG00000000686	sf3b4	77	88.449	ENSORLG00015010989	sf3b4	58	98.261	Oryzias_latipes_hsok
ENSPNAG00000000686	sf3b4	59	98.276	ENSOMEG00000013694	sf3b4	58	98.261	Oryzias_melastigma
ENSPNAG00000000686	sf3b4	61	96.667	ENSOGAG00000006265	SF3B4	57	96.667	Otolemur_garnettii
ENSPNAG00000000686	sf3b4	61	96.667	ENSOARG00000020718	-	57	96.667	Ovis_aries
ENSPNAG00000000686	sf3b4	62	78.689	ENSOARG00000007368	-	55	80.973	Ovis_aries
ENSPNAG00000000686	sf3b4	79	80.938	ENSPPAG00000040904	SF3B4	57	96.667	Pan_paniscus
ENSPNAG00000000686	sf3b4	99	67.241	ENSPPAG00000030024	-	59	86.667	Pan_paniscus
ENSPNAG00000000686	sf3b4	61	96.667	ENSPPRG00000007384	SF3B4	57	96.667	Panthera_pardus
ENSPNAG00000000686	sf3b4	61	96.667	ENSPTIG00000014530	SF3B4	57	96.667	Panthera_tigris_altaica
ENSPNAG00000000686	sf3b4	99	67.332	ENSPTRG00000049727	-	60	87.083	Pan_troglodytes
ENSPNAG00000000686	sf3b4	79	80.938	ENSPTRG00000001243	SF3B4	57	96.667	Pan_troglodytes
ENSPNAG00000000686	sf3b4	79	80.938	ENSPANG00000005126	SF3B4	57	96.667	Papio_anubis
ENSPNAG00000000686	sf3b4	72	96.127	ENSPKIG00000020669	sf3b4	76	96.181	Paramormyrops_kingsleyae
ENSPNAG00000000686	sf3b4	61	96.667	ENSPEMG00000017568	Sf3b4	57	96.667	Peromyscus_maniculatus_bairdii
ENSPNAG00000000686	sf3b4	54	95.305	ENSPMAG00000007842	-	50	95.305	Petromyzon_marinus
ENSPNAG00000000686	sf3b4	79	80.938	ENSPCIG00000008765	SF3B4	57	96.667	Phascolarctos_cinereus
ENSPNAG00000000686	sf3b4	68	95.506	ENSPFOG00000005754	sf3b4	62	97.531	Poecilia_formosa
ENSPNAG00000000686	sf3b4	68	95.506	ENSPLAG00000001401	sf3b4	67	97.531	Poecilia_latipinna
ENSPNAG00000000686	sf3b4	68	94.757	ENSPREG00000011076	sf3b4	60	96.708	Poecilia_reticulata
ENSPNAG00000000686	sf3b4	53	96.635	ENSPCAG00000000392	SF3B4	50	96.635	Procavia_capensis
ENSPNAG00000000686	sf3b4	61	96.667	ENSPCOG00000015399	SF3B4	57	96.667	Propithecus_coquereli
ENSPNAG00000000686	sf3b4	61	96.667	ENSPVAG00000014171	SF3B4	57	96.667	Pteropus_vampyrus
ENSPNAG00000000686	sf3b4	68	95.149	ENSPNYG00000012700	sf3b4	60	97.917	Pundamilia_nyererei
ENSPNAG00000000686	sf3b4	61	96.667	ENSRNOG00000021181	Sf3b4	57	96.667	Rattus_norvegicus
ENSPNAG00000000686	sf3b4	79	80.938	ENSRBIG00000043392	SF3B4	57	96.667	Rhinopithecus_bieti
ENSPNAG00000000686	sf3b4	92	58.421	ENSRROG00000028213	-	56	73.874	Rhinopithecus_roxellana
ENSPNAG00000000686	sf3b4	79	80.938	ENSRROG00000029366	SF3B4	57	96.667	Rhinopithecus_roxellana
ENSPNAG00000000686	sf3b4	79	80.625	ENSSBOG00000012310	-	57	96.250	Saimiri_boliviensis_boliviensis
ENSPNAG00000000686	sf3b4	79	77.500	ENSSHAG00000004043	SF3B4	56	92.083	Sarcophilus_harrisii
ENSPNAG00000000686	sf3b4	72	95.775	ENSSFOG00015008864	sf3b4	71	95.833	Scleropages_formosus
ENSPNAG00000000686	sf3b4	77	90.000	ENSSMAG00000006837	sf3b4	60	97.917	Scophthalmus_maximus
ENSPNAG00000000686	sf3b4	67	96.591	ENSSDUG00000012064	sf3b4	60	97.500	Seriola_dumerili
ENSPNAG00000000686	sf3b4	67	96.970	ENSSLDG00000014226	sf3b4	60	97.917	Seriola_lalandi_dorsalis
ENSPNAG00000000686	sf3b4	63	94.309	ENSSPUG00000001028	SF3B4	58	97.826	Sphenodon_punctatus
ENSPNAG00000000686	sf3b4	61	97.917	ENSSPAG00000019219	sf3b4	60	97.917	Stegastes_partitus
ENSPNAG00000000686	sf3b4	81	56.289	ENSSSCG00000039440	-	56	63.478	Sus_scrofa
ENSPNAG00000000686	sf3b4	79	79.321	ENSSSCG00000006665	-	57	96.667	Sus_scrofa
ENSPNAG00000000686	sf3b4	60	97.034	ENSTGUG00000004470	SF3B4	91	98.261	Taeniopygia_guttata
ENSPNAG00000000686	sf3b4	82	86.916	ENSTRUG00000004516	sf3b4	58	97.826	Takifugu_rubripes
ENSPNAG00000000686	sf3b4	59	98.696	ENSTNIG00000009156	sf3b4	59	98.696	Tetraodon_nigroviridis
ENSPNAG00000000686	sf3b4	61	96.667	ENSTTRG00000005217	SF3B4	57	96.667	Tursiops_truncatus
ENSPNAG00000000686	sf3b4	61	96.667	ENSUAMG00000022468	SF3B4	57	96.667	Ursus_americanus
ENSPNAG00000000686	sf3b4	61	96.667	ENSUMAG00000003802	SF3B4	57	96.667	Ursus_maritimus
ENSPNAG00000000686	sf3b4	58	96.491	ENSVPAG00000008152	SF3B4	55	96.491	Vicugna_pacos
ENSPNAG00000000686	sf3b4	92	68.633	ENSXETG00000011038	sf3b4	54	100.000	Xenopus_tropicalis
ENSPNAG00000000686	sf3b4	68	95.880	ENSXCOG00000019895	sf3b4	62	97.942	Xiphophorus_couchianus
ENSPNAG00000000686	sf3b4	67	96.591	ENSXMAG00000003772	sf3b4	62	97.942	Xiphophorus_maculatus