EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000000697 (Gene tree)
Gene ID: 108411343
Gene Symbol: prpf4
Alias: mg:ab03a02|zgc:65943
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 16751 bases
Position: chrKV576062.1:210775-227525
Accession: 108411343
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000023580	PRP4	PF08799.11	6.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000012268	-	5368	XM_017682862	ENSPNAP00000023580	507 (aa)	XP_017538351	UPI0008147D2C

Gene Model

Click here to download ENSPNAG00000000697's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000000697's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000000697	prpf4	58	31.361	ENSPNAG00000017527	tbl3	70	32.544
ENSPNAG00000000697	prpf4	60	30.000	ENSPNAG00000000469	rack1	97	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000000697	prpf4	99	80.594	ENSG00000136875	PRPF4	97	80.594	Homo_sapiens
ENSPNAG00000000697	prpf4	99	80.745	ENSAPOG00000014132	prpf4	99	80.745	Acanthochromis_polyacanthus
ENSPNAG00000000697	prpf4	99	80.396	ENSAMEG00000013048	PRPF4	95	80.396	Ailuropoda_melanoleuca
ENSPNAG00000000697	prpf4	100	81.176	ENSACIG00000005579	prpf4	100	81.176	Amphilophus_citrinellus
ENSPNAG00000000697	prpf4	100	80.392	ENSAOCG00000005457	prpf4	100	80.392	Amphiprion_ocellaris
ENSPNAG00000000697	prpf4	100	80.196	ENSAPEG00000000776	prpf4	100	80.196	Amphiprion_percula
ENSPNAG00000000697	prpf4	100	80.784	ENSATEG00000023013	prpf4	100	80.784	Anabas_testudineus
ENSPNAG00000000697	prpf4	99	80.000	ENSAPLG00000006534	PRPF4	94	80.000	Anas_platyrhynchos
ENSPNAG00000000697	prpf4	99	80.118	ENSACAG00000015110	PRPF4	97	80.118	Anolis_carolinensis
ENSPNAG00000000697	prpf4	99	80.396	ENSANAG00000022464	PRPF4	93	80.396	Aotus_nancymaae
ENSPNAG00000000697	prpf4	100	80.000	ENSACLG00000019031	prpf4	100	79.804	Astatotilapia_calliptera
ENSPNAG00000000697	prpf4	100	72.084	ENSAMXG00000006756	prpf4	100	85.799	Astyanax_mexicanus
ENSPNAG00000000697	prpf4	99	80.396	ENSBTAG00000004571	PRPF4	97	80.396	Bos_taurus
ENSPNAG00000000697	prpf4	89	45.011	WBGene00007972	prp-4	91	45.011	Caenorhabditis_elegans
ENSPNAG00000000697	prpf4	99	80.396	ENSCJAG00000017856	PRPF4	97	80.396	Callithrix_jacchus
ENSPNAG00000000697	prpf4	99	80.396	ENSCAFG00000003224	PRPF4	94	80.396	Canis_familiaris
ENSPNAG00000000697	prpf4	99	80.396	ENSCAFG00020022637	PRPF4	97	80.396	Canis_lupus_dingo
ENSPNAG00000000697	prpf4	99	80.198	ENSCHIG00000024648	-	97	80.198	Capra_hircus
ENSPNAG00000000697	prpf4	99	80.198	ENSTSYG00000010366	PRPF4	97	80.198	Carlito_syrichta
ENSPNAG00000000697	prpf4	82	72.792	ENSCAPG00000008935	PRPF4	97	72.792	Cavia_aperea
ENSPNAG00000000697	prpf4	99	74.851	ENSCPOG00000014729	-	97	74.851	Cavia_porcellus
ENSPNAG00000000697	prpf4	99	79.604	ENSCPOG00000010747	-	97	79.604	Cavia_porcellus
ENSPNAG00000000697	prpf4	99	80.594	ENSCCAG00000028990	PRPF4	97	80.594	Cebus_capucinus
ENSPNAG00000000697	prpf4	99	80.396	ENSCATG00000021552	PRPF4	97	80.396	Cercocebus_atys
ENSPNAG00000000697	prpf4	99	80.000	ENSCLAG00000013448	PRPF4	97	80.000	Chinchilla_lanigera
ENSPNAG00000000697	prpf4	89	80.310	ENSCHOG00000007233	PRPF4	100	80.310	Choloepus_hoffmanni
ENSPNAG00000000697	prpf4	100	78.698	ENSCPBG00000019136	PRPF4	73	78.698	Chrysemys_picta_bellii
ENSPNAG00000000697	prpf4	94	59.792	ENSCING00000001299	-	94	59.792	Ciona_intestinalis
ENSPNAG00000000697	prpf4	99	57.988	ENSCSAVG00000009178	-	99	59.740	Ciona_savignyi
ENSPNAG00000000697	prpf4	99	80.396	ENSCANG00000003246	PRPF4	97	80.396	Colobus_angolensis_palliatus
ENSPNAG00000000697	prpf4	99	80.594	ENSCGRG00001016992	Prpf4	97	80.594	Cricetulus_griseus_chok1gshd
ENSPNAG00000000697	prpf4	99	80.594	ENSCGRG00000017560	Prpf4	97	80.594	Cricetulus_griseus_crigri
ENSPNAG00000000697	prpf4	99	80.396	ENSCSEG00000020451	prpf4	99	80.396	Cynoglossus_semilaevis
ENSPNAG00000000697	prpf4	100	88.166	ENSDARG00000067639	prpf4	100	88.166	Danio_rerio
ENSPNAG00000000697	prpf4	99	80.198	ENSDNOG00000013203	PRPF4	97	80.198	Dasypus_novemcinctus
ENSPNAG00000000697	prpf4	99	80.000	ENSDORG00000026275	Prpf4	97	80.000	Dipodomys_ordii
ENSPNAG00000000697	prpf4	99	51.091	FBgn0036733	U4-U6-60K	99	51.718	Drosophila_melanogaster
ENSPNAG00000000697	prpf4	99	80.000	ENSETEG00000020389	PRPF4	97	80.000	Echinops_telfairi
ENSPNAG00000000697	prpf4	99	69.595	ENSEBUG00000015229	prpf4	88	69.820	Eptatretus_burgeri
ENSPNAG00000000697	prpf4	99	80.396	ENSEASG00005022678	PRPF4	97	80.396	Equus_asinus_asinus
ENSPNAG00000000697	prpf4	99	80.396	ENSECAG00000007072	PRPF4	97	80.396	Equus_caballus
ENSPNAG00000000697	prpf4	84	83.682	ENSEEUG00000007480	PRPF4	96	64.172	Erinaceus_europaeus
ENSPNAG00000000697	prpf4	100	88.166	ENSELUG00000007510	prpf4	100	88.166	Esox_lucius
ENSPNAG00000000697	prpf4	99	80.396	ENSFCAG00000005514	PRPF4	97	80.396	Felis_catus
ENSPNAG00000000697	prpf4	99	77.828	ENSFALG00000005423	PRPF4	85	77.828	Ficedula_albicollis
ENSPNAG00000000697	prpf4	99	80.198	ENSFDAG00000005839	PRPF4	97	80.198	Fukomys_damarensis
ENSPNAG00000000697	prpf4	100	78.824	ENSFHEG00000001300	prpf4	100	78.824	Fundulus_heteroclitus
ENSPNAG00000000697	prpf4	99	80.040	ENSGALG00000008857	PRPF4	94	80.040	Gallus_gallus
ENSPNAG00000000697	prpf4	93	74.695	ENSGAFG00000012164	prpf4	69	74.695	Gambusia_affinis
ENSPNAG00000000697	prpf4	100	72.157	ENSGACG00000015476	prpf4	100	71.765	Gasterosteus_aculeatus
ENSPNAG00000000697	prpf4	100	78.895	ENSGAGG00000025029	PRPF4	94	78.895	Gopherus_agassizii
ENSPNAG00000000697	prpf4	99	80.594	ENSGGOG00000006943	PRPF4	97	80.594	Gorilla_gorilla
ENSPNAG00000000697	prpf4	100	79.804	ENSHBUG00000000562	prpf4	100	79.804	Haplochromis_burtoni
ENSPNAG00000000697	prpf4	99	80.000	ENSHGLG00000015191	PRPF4	97	80.000	Heterocephalus_glaber_female
ENSPNAG00000000697	prpf4	96	68.378	ENSHGLG00000016628	-	95	69.199	Heterocephalus_glaber_female
ENSPNAG00000000697	prpf4	99	64.158	ENSHGLG00000003838	-	97	64.158	Heterocephalus_glaber_female
ENSPNAG00000000697	prpf4	99	64.158	ENSHGLG00100005571	-	97	64.158	Heterocephalus_glaber_male
ENSPNAG00000000697	prpf4	100	89.152	ENSIPUG00000017956	PRPF4	100	89.152	Ictalurus_punctatus
ENSPNAG00000000697	prpf4	99	80.198	ENSSTOG00000027833	PRPF4	97	80.198	Ictidomys_tridecemlineatus
ENSPNAG00000000697	prpf4	99	80.198	ENSJJAG00000008838	Prpf4	97	80.198	Jaculus_jaculus
ENSPNAG00000000697	prpf4	100	79.804	ENSKMAG00000013236	prpf4	100	79.804	Kryptolebias_marmoratus
ENSPNAG00000000697	prpf4	100	79.331	ENSLBEG00000020611	prpf4	100	79.331	Labrus_bergylta
ENSPNAG00000000697	prpf4	100	75.835	ENSLACG00000016317	PRPF4	97	75.835	Latimeria_chalumnae
ENSPNAG00000000697	prpf4	100	86.588	ENSLOCG00000000581	prpf4	100	86.588	Lepisosteus_oculatus
ENSPNAG00000000697	prpf4	99	80.396	ENSLAFG00000018225	PRPF4	97	80.396	Loxodonta_africana
ENSPNAG00000000697	prpf4	99	80.198	ENSMFAG00000039397	PRPF4	97	80.198	Macaca_fascicularis
ENSPNAG00000000697	prpf4	99	80.396	ENSMMUG00000005844	PRPF4	97	80.396	Macaca_mulatta
ENSPNAG00000000697	prpf4	99	71.881	ENSMNEG00000033737	PRPF4	97	71.881	Macaca_nemestrina
ENSPNAG00000000697	prpf4	99	80.396	ENSMLEG00000040284	PRPF4	97	80.396	Mandrillus_leucophaeus
ENSPNAG00000000697	prpf4	99	80.868	ENSMAMG00000020141	prpf4	99	80.868	Mastacembelus_armatus
ENSPNAG00000000697	prpf4	100	80.000	ENSMZEG00005023205	prpf4	100	79.804	Maylandia_zebra
ENSPNAG00000000697	prpf4	99	79.644	ENSMGAG00000001796	PRPF4	94	79.644	Meleagris_gallopavo
ENSPNAG00000000697	prpf4	99	80.594	ENSMAUG00000018022	Prpf4	97	80.594	Mesocricetus_auratus
ENSPNAG00000000697	prpf4	99	80.000	ENSMICG00000015022	PRPF4	97	80.000	Microcebus_murinus
ENSPNAG00000000697	prpf4	99	80.198	ENSMOCG00000018273	Prpf4	97	80.198	Microtus_ochrogaster
ENSPNAG00000000697	prpf4	99	80.000	ENSMMOG00000021177	prpf4	99	80.000	Mola_mola
ENSPNAG00000000697	prpf4	99	80.000	ENSMODG00000004444	-	97	80.594	Monodelphis_domestica
ENSPNAG00000000697	prpf4	99	80.000	ENSMODG00000025096	-	94	80.594	Monodelphis_domestica
ENSPNAG00000000697	prpf4	100	80.784	ENSMALG00000013624	prpf4	100	80.784	Monopterus_albus
ENSPNAG00000000697	prpf4	99	80.594	MGP_CAROLIEiJ_G0026078	Prpf4	97	80.594	Mus_caroli
ENSPNAG00000000697	prpf4	99	80.594	ENSMUSG00000066148	Prpf4	97	80.594	Mus_musculus
ENSPNAG00000000697	prpf4	99	80.792	MGP_PahariEiJ_G0028413	Prpf4	97	80.792	Mus_pahari
ENSPNAG00000000697	prpf4	99	80.594	MGP_SPRETEiJ_G0027042	Prpf4	97	80.594	Mus_spretus
ENSPNAG00000000697	prpf4	99	80.396	ENSMPUG00000007883	PRPF4	97	80.396	Mustela_putorius_furo
ENSPNAG00000000697	prpf4	99	80.396	ENSMLUG00000015309	-	94	80.396	Myotis_lucifugus
ENSPNAG00000000697	prpf4	99	79.010	ENSMLUG00000008626	-	94	79.010	Myotis_lucifugus
ENSPNAG00000000697	prpf4	99	75.050	ENSNGAG00000000468	Prpf4	97	75.050	Nannospalax_galili
ENSPNAG00000000697	prpf4	100	80.196	ENSNBRG00000007972	prpf4	100	80.000	Neolamprologus_brichardi
ENSPNAG00000000697	prpf4	99	80.396	ENSNLEG00000016647	PRPF4	97	80.396	Nomascus_leucogenys
ENSPNAG00000000697	prpf4	99	80.000	ENSMEUG00000013256	PRPF4	98	80.594	Notamacropus_eugenii
ENSPNAG00000000697	prpf4	99	80.198	ENSOPRG00000005302	PRPF4	97	80.198	Ochotona_princeps
ENSPNAG00000000697	prpf4	99	80.000	ENSODEG00000018147	PRPF4	97	80.000	Octodon_degus
ENSPNAG00000000697	prpf4	100	80.196	ENSONIG00000012671	prpf4	100	80.196	Oreochromis_niloticus
ENSPNAG00000000697	prpf4	99	80.198	ENSOCUG00000005046	PRPF4	97	80.198	Oryctolagus_cuniculus
ENSPNAG00000000697	prpf4	100	79.331	ENSORLG00000019641	prpf4	100	79.331	Oryzias_latipes
ENSPNAG00000000697	prpf4	100	79.331	ENSORLG00020019438	prpf4	100	79.331	Oryzias_latipes_hni
ENSPNAG00000000697	prpf4	100	78.937	ENSOMEG00000020941	prpf4	100	79.418	Oryzias_melastigma
ENSPNAG00000000697	prpf4	99	76.040	ENSOGAG00000007802	PRPF4	95	76.040	Otolemur_garnettii
ENSPNAG00000000697	prpf4	99	80.198	ENSOARG00000006319	PRPF4	94	80.198	Ovis_aries
ENSPNAG00000000697	prpf4	99	80.594	ENSPPAG00000041797	PRPF4	97	80.594	Pan_paniscus
ENSPNAG00000000697	prpf4	99	80.396	ENSPPRG00000014360	PRPF4	97	80.396	Panthera_pardus
ENSPNAG00000000697	prpf4	99	80.396	ENSPTIG00000009574	PRPF4	97	80.396	Panthera_tigris_altaica
ENSPNAG00000000697	prpf4	99	80.594	ENSPTRG00000021274	PRPF4	97	80.594	Pan_troglodytes
ENSPNAG00000000697	prpf4	99	80.198	ENSPANG00000025776	PRPF4	93	80.198	Papio_anubis
ENSPNAG00000000697	prpf4	100	88.560	ENSPKIG00000017259	prpf4	100	88.560	Paramormyrops_kingsleyae
ENSPNAG00000000697	prpf4	100	78.107	ENSPSIG00000010713	PRPF4	89	78.107	Pelodiscus_sinensis
ENSPNAG00000000697	prpf4	100	59.777	ENSPMGG00000000997	prpf4	98	59.963	Periophthalmus_magnuspinnatus
ENSPNAG00000000697	prpf4	99	80.594	ENSPEMG00000024115	Prpf4	97	80.594	Peromyscus_maniculatus_bairdii
ENSPNAG00000000697	prpf4	99	80.198	ENSPCIG00000003821	PRPF4	98	80.198	Phascolarctos_cinereus
ENSPNAG00000000697	prpf4	100	72.763	ENSPFOG00000013524	prpf4	99	74.695	Poecilia_formosa
ENSPNAG00000000697	prpf4	93	73.457	ENSPLAG00000011620	prpf4	99	71.037	Poecilia_latipinna
ENSPNAG00000000697	prpf4	98	74.926	ENSPMEG00000006813	prpf4	100	74.926	Poecilia_mexicana
ENSPNAG00000000697	prpf4	99	80.396	ENSPCAG00000002561	PRPF4	98	80.396	Procavia_capensis
ENSPNAG00000000697	prpf4	99	80.198	ENSPCOG00000011975	PRPF4	97	80.198	Propithecus_coquereli
ENSPNAG00000000697	prpf4	99	77.426	ENSPVAG00000004708	PRPF4	97	77.426	Pteropus_vampyrus
ENSPNAG00000000697	prpf4	100	80.000	ENSPNYG00000008013	prpf4	100	79.804	Pundamilia_nyererei
ENSPNAG00000000697	prpf4	99	80.396	ENSRNOG00000014777	Prpf4	97	80.396	Rattus_norvegicus
ENSPNAG00000000697	prpf4	99	80.396	ENSRBIG00000040221	PRPF4	97	80.396	Rhinopithecus_bieti
ENSPNAG00000000697	prpf4	99	80.396	ENSRROG00000040240	PRPF4	97	80.396	Rhinopithecus_roxellana
ENSPNAG00000000697	prpf4	99	80.198	ENSSHAG00000017658	PRPF4	97	80.792	Sarcophilus_harrisii
ENSPNAG00000000697	prpf4	100	89.744	ENSSFOG00015008963	prpf4	100	89.744	Scleropages_formosus
ENSPNAG00000000697	prpf4	100	79.608	ENSSMAG00000008889	prpf4	100	79.608	Scophthalmus_maximus
ENSPNAG00000000697	prpf4	99	80.331	ENSSDUG00000022083	prpf4	94	80.538	Seriola_dumerili
ENSPNAG00000000697	prpf4	99	80.745	ENSSLDG00000008115	prpf4	94	80.952	Seriola_lalandi_dorsalis
ENSPNAG00000000697	prpf4	99	80.040	ENSSPUG00000015582	PRPF4	97	80.040	Sphenodon_punctatus
ENSPNAG00000000697	prpf4	100	74.269	ENSSPAG00000011286	prpf4	100	74.269	Stegastes_partitus
ENSPNAG00000000697	prpf4	99	80.396	ENSSSCG00000024648	PRPF4	97	80.396	Sus_scrofa
ENSPNAG00000000697	prpf4	97	80.122	ENSTGUG00000002623	PRPF4	100	80.164	Taeniopygia_guttata
ENSPNAG00000000697	prpf4	99	80.632	ENSTRUG00000008853	prpf4	99	80.632	Takifugu_rubripes
ENSPNAG00000000697	prpf4	99	80.396	ENSTNIG00000013250	prpf4	99	80.396	Tetraodon_nigroviridis
ENSPNAG00000000697	prpf4	99	72.871	ENSTBEG00000000821	PRPF4	97	72.871	Tupaia_belangeri
ENSPNAG00000000697	prpf4	89	81.544	ENSTTRG00000003246	PRPF4	85	81.544	Tursiops_truncatus
ENSPNAG00000000697	prpf4	70	70.986	ENSUAMG00000018288	PRPF4	96	70.986	Ursus_americanus
ENSPNAG00000000697	prpf4	99	79.802	ENSUMAG00000019375	PRPF4	97	79.802	Ursus_maritimus
ENSPNAG00000000697	prpf4	99	80.000	ENSVPAG00000005281	PRPF4	97	80.000	Vicugna_pacos
ENSPNAG00000000697	prpf4	99	80.000	ENSVVUG00000002476	PRPF4	99	80.000	Vulpes_vulpes
ENSPNAG00000000697	prpf4	71	56.546	ENSXCOG00000006101	prpf4	93	60.396	Xiphophorus_couchianus
ENSPNAG00000000697	prpf4	91	64.440	ENSXMAG00000002750	prpf4	99	66.798	Xiphophorus_maculatus