EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000000844 (Gene tree)
Gene ID: 108425902
Gene Symbol: msi2b
Alias: zgc:174035|zgc:63812
Full Name: RNA-binding protein Musashi homolog 2
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 293322 bases
Position: chrKV575321.1:3630605-3923926
Accession: 108425902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000001619	RRM_1	PF00076.22	1.6e-33	1	2
ENSPNAP00000001619	RRM_1	PF00076.22	1.6e-33	2	2
ENSPNAP00000001596	RRM_1	PF00076.22	2.8e-29	1	2
ENSPNAP00000001596	RRM_1	PF00076.22	2.8e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000011888	-	945	-	ENSPNAP00000001596	314 (aa)	-	-
ENSPNAT00000011857	-	1206	XM_017694952	ENSPNAP00000001619	389 (aa)	XP_017550441	UPI0008147D70

Gene Model

Click here to download ENSPNAG00000000844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000000844's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000000844	msi2b	74	35.802	ENSPNAG00000013057	rbm4.2	56	35.802
ENSPNAG00000000844	msi2b	64	38.579	ENSPNAG00000021630	-	97	35.955
ENSPNAG00000000844	msi2b	100	72.537	ENSPNAG00000019337	msi1	100	72.537
ENSPNAG00000000844	msi2b	53	44.000	ENSPNAG00000007752	hnrnpa1a	78	41.279
ENSPNAG00000000844	msi2b	51	44.654	ENSPNAG00000000458	hnrnpaba	66	45.701
ENSPNAG00000000844	msi2b	92	39.130	ENSPNAG00000011639	dazap1	63	39.130
ENSPNAG00000000844	msi2b	54	40.625	ENSPNAG00000021384	HNRNPA3	56	41.401
ENSPNAG00000000844	msi2b	52	36.842	ENSPNAG00000018051	-	79	38.217
ENSPNAG00000000844	msi2b	56	38.202	ENSPNAG00000023333	HNRNPA0	91	35.338
ENSPNAG00000000844	msi2b	50	48.701	ENSPNAG00000016380	hnrnpdl	87	40.441
ENSPNAG00000000844	msi2b	100	96.815	ENSPNAG00000014957	msi2a	100	96.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000000844	msi2b	100	88.754	ENSG00000153944	MSI2	100	90.274	Homo_sapiens
ENSPNAG00000000844	msi2b	100	94.268	ENSAPOG00000001658	msi2a	100	96.296	Acanthochromis_polyacanthus
ENSPNAG00000000844	msi2b	93	87.097	ENSAMEG00000002697	MSI2	99	89.711	Ailuropoda_melanoleuca
ENSPNAG00000000844	msi2b	100	95.200	ENSACIG00000009475	msi2a	100	88.041	Amphilophus_citrinellus
ENSPNAG00000000844	msi2b	56	87.407	ENSAOCG00000014822	msi2a	69	87.407	Amphiprion_ocellaris
ENSPNAG00000000844	msi2b	100	94.268	ENSAPEG00000007706	msi2a	100	94.268	Amphiprion_percula
ENSPNAG00000000844	msi2b	100	94.268	ENSATEG00000010498	msi2a	100	96.296	Anabas_testudineus
ENSPNAG00000000844	msi2b	93	94.982	ENSATEG00000003301	-	100	94.982	Anabas_testudineus
ENSPNAG00000000844	msi2b	89	96.196	ENSACAG00000005452	MSI2	88	82.817	Anolis_carolinensis
ENSPNAG00000000844	msi2b	100	88.754	ENSANAG00000037827	MSI2	100	90.274	Aotus_nancymaae
ENSPNAG00000000844	msi2b	100	93.631	ENSACLG00000007752	msi2a	100	95.885	Astatotilapia_calliptera
ENSPNAG00000000844	msi2b	100	95.116	ENSAMXG00000032796	msi2a	100	95.116	Astyanax_mexicanus
ENSPNAG00000000844	msi2b	100	99.229	ENSAMXG00000010474	msi2b	100	99.229	Astyanax_mexicanus
ENSPNAG00000000844	msi2b	93	93.174	ENSBTAG00000004406	MSI2	97	94.881	Bos_taurus
ENSPNAG00000000844	msi2b	63	61.502	WBGene00003423	msi-1	76	59.839	Caenorhabditis_elegans
ENSPNAG00000000844	msi2b	100	88.754	ENSCJAG00000013998	MSI2	100	90.274	Callithrix_jacchus
ENSPNAG00000000844	msi2b	93	87.055	ENSCAFG00020025620	MSI2	81	89.711	Canis_lupus_dingo
ENSPNAG00000000844	msi2b	100	87.234	ENSCHIG00000016580	MSI2	100	88.754	Capra_hircus
ENSPNAG00000000844	msi2b	93	88.693	ENSCPOG00000034042	MSI2	99	90.459	Cavia_porcellus
ENSPNAG00000000844	msi2b	100	88.754	ENSCCAG00000033927	MSI2	100	90.274	Cebus_capucinus
ENSPNAG00000000844	msi2b	93	92.478	ENSCATG00000040879	MSI2	100	89.362	Cercocebus_atys
ENSPNAG00000000844	msi2b	100	83.237	ENSCLAG00000014325	MSI2	100	85.591	Chinchilla_lanigera
ENSPNAG00000000844	msi2b	100	88.754	ENSCSAG00000005633	MSI2	100	90.274	Chlorocebus_sabaeus
ENSPNAG00000000844	msi2b	89	67.143	ENSCHOG00000008660	MSI2	83	88.235	Choloepus_hoffmanni
ENSPNAG00000000844	msi2b	89	97.268	ENSCPBG00000009942	MSI2	95	88.433	Chrysemys_picta_bellii
ENSPNAG00000000844	msi2b	87	53.171	ENSCING00000018579	-	97	53.153	Ciona_intestinalis
ENSPNAG00000000844	msi2b	59	67.005	ENSCSAVG00000010397	-	67	68.900	Ciona_savignyi
ENSPNAG00000000844	msi2b	93	92.478	ENSCANG00000036414	MSI2	100	89.711	Colobus_angolensis_palliatus
ENSPNAG00000000844	msi2b	100	88.182	ENSCGRG00001013330	Msi2	100	89.697	Cricetulus_griseus_chok1gshd
ENSPNAG00000000844	msi2b	93	86.817	ENSCGRG00000003141	Msi2	100	89.423	Cricetulus_griseus_crigri
ENSPNAG00000000844	msi2b	82	75.897	ENSCSEG00000013557	msi2a	83	74.872	Cynoglossus_semilaevis
ENSPNAG00000000844	msi2b	100	82.462	ENSCSEG00000003266	-	100	82.154	Cynoglossus_semilaevis
ENSPNAG00000000844	msi2b	55	67.391	ENSCSEG00000013549	msi2a	100	75.543	Cynoglossus_semilaevis
ENSPNAG00000000844	msi2b	100	92.802	ENSCVAG00000017075	msi2a	100	96.296	Cyprinodon_variegatus
ENSPNAG00000000844	msi2b	100	90.231	ENSDARG00000033901	msi2a	100	90.231	Danio_rerio
ENSPNAG00000000844	msi2b	100	94.608	ENSDARG00000032614	msi2b	100	100.000	Danio_rerio
ENSPNAG00000000844	msi2b	93	93.426	ENSDNOG00000014501	MSI2	100	95.156	Dasypus_novemcinctus
ENSPNAG00000000844	msi2b	82	80.303	ENSDORG00000005394	Msi2	84	83.333	Dipodomys_ordii
ENSPNAG00000000844	msi2b	96	51.811	FBgn0260943	Rbp6	88	66.667	Drosophila_melanogaster
ENSPNAG00000000844	msi2b	66	74.342	ENSETEG00000012450	-	64	74.342	Echinops_telfairi
ENSPNAG00000000844	msi2b	93	64.856	ENSEBUG00000006732	msi2a	87	64.856	Eptatretus_burgeri
ENSPNAG00000000844	msi2b	93	90.635	ENSEASG00005002965	MSI2	97	82.738	Equus_asinus_asinus
ENSPNAG00000000844	msi2b	93	90.909	ENSECAG00000011435	MSI2	100	83.380	Equus_caballus
ENSPNAG00000000844	msi2b	86	77.953	ENSEEUG00000007810	MSI2	100	79.921	Erinaceus_europaeus
ENSPNAG00000000844	msi2b	100	95.860	ENSELUG00000011747	msi2a	100	95.860	Esox_lucius
ENSPNAG00000000844	msi2b	100	95.385	ENSELUG00000001361	msi2b	100	92.929	Esox_lucius
ENSPNAG00000000844	msi2b	100	88.754	ENSFCAG00000041686	MSI2	100	90.274	Felis_catus
ENSPNAG00000000844	msi2b	55	76.000	ENSFCAG00000033787	-	82	77.564	Felis_catus
ENSPNAG00000000844	msi2b	93	87.097	ENSFDAG00000016118	MSI2	100	89.711	Fukomys_damarensis
ENSPNAG00000000844	msi2b	100	93.631	ENSFHEG00000000084	msi2a	100	93.631	Fundulus_heteroclitus
ENSPNAG00000000844	msi2b	53	81.731	ENSGMOG00000007596	-	100	96.154	Gadus_morhua
ENSPNAG00000000844	msi2b	100	82.081	ENSGALG00000005567	MSI2	100	84.438	Gallus_gallus
ENSPNAG00000000844	msi2b	96	85.902	ENSGAFG00000006974	msi2a	90	96.026	Gambusia_affinis
ENSPNAG00000000844	msi2b	96	89.796	ENSGAGG00000016542	MSI2	100	86.230	Gopherus_agassizii
ENSPNAG00000000844	msi2b	93	92.920	ENSGGOG00000013182	MSI2	100	89.711	Gorilla_gorilla
ENSPNAG00000000844	msi2b	100	93.631	ENSHBUG00000020800	msi2a	100	95.885	Haplochromis_burtoni
ENSPNAG00000000844	msi2b	100	74.277	ENSHGLG00000012444	MSI2	100	76.657	Heterocephalus_glaber_female
ENSPNAG00000000844	msi2b	78	81.159	ENSHGLG00100003744	MSI2	100	85.096	Heterocephalus_glaber_male
ENSPNAG00000000844	msi2b	97	90.040	ENSHCOG00000000266	msi2a	100	87.500	Hippocampus_comes
ENSPNAG00000000844	msi2b	95	83.658	ENSHCOG00000017241	-	98	70.896	Hippocampus_comes
ENSPNAG00000000844	msi2b	100	93.631	ENSIPUG00000021097	msi2a	100	97.119	Ictalurus_punctatus
ENSPNAG00000000844	msi2b	100	97.943	ENSIPUG00000003732	msi2b	100	97.943	Ictalurus_punctatus
ENSPNAG00000000844	msi2b	93	88.693	ENSSTOG00000007884	MSI2	99	90.459	Ictidomys_tridecemlineatus
ENSPNAG00000000844	msi2b	78	80.905	ENSJJAG00000006292	-	100	80.905	Jaculus_jaculus
ENSPNAG00000000844	msi2b	100	92.031	ENSKMAG00000009494	msi2a	100	92.031	Kryptolebias_marmoratus
ENSPNAG00000000844	msi2b	100	94.268	ENSLBEG00000007061	msi2a	100	94.268	Labrus_bergylta
ENSPNAG00000000844	msi2b	95	78.717	ENSLBEG00000026223	-	100	78.426	Labrus_bergylta
ENSPNAG00000000844	msi2b	54	82.353	ENSLACG00000016798	MSI2	98	95.604	Latimeria_chalumnae
ENSPNAG00000000844	msi2b	100	96.144	ENSLOCG00000004675	msi2b	100	96.144	Lepisosteus_oculatus
ENSPNAG00000000844	msi2b	93	92.920	ENSMFAG00000003775	MSI2	100	89.711	Macaca_fascicularis
ENSPNAG00000000844	msi2b	93	92.920	ENSMMUG00000002069	MSI2	100	89.711	Macaca_mulatta
ENSPNAG00000000844	msi2b	100	88.754	ENSMNEG00000045275	MSI2	100	90.274	Macaca_nemestrina
ENSPNAG00000000844	msi2b	93	92.478	ENSMLEG00000033888	MSI2	100	89.711	Mandrillus_leucophaeus
ENSPNAG00000000844	msi2b	100	91.720	ENSMAMG00000002488	-	99	95.364	Mastacembelus_armatus
ENSPNAG00000000844	msi2b	100	94.904	ENSMAMG00000010503	msi2a	100	96.296	Mastacembelus_armatus
ENSPNAG00000000844	msi2b	100	93.631	ENSMZEG00005007676	msi2a	100	93.631	Maylandia_zebra
ENSPNAG00000000844	msi2b	100	82.709	ENSMAUG00000003862	Msi2	100	85.057	Mesocricetus_auratus
ENSPNAG00000000844	msi2b	100	71.171	ENSMICG00000032913	-	100	72.673	Microcebus_murinus
ENSPNAG00000000844	msi2b	100	88.754	ENSMICG00000013598	-	100	90.274	Microcebus_murinus
ENSPNAG00000000844	msi2b	100	82.948	ENSMOCG00000005820	Msi2	100	85.303	Microtus_ochrogaster
ENSPNAG00000000844	msi2b	90	85.614	ENSMMOG00000008348	msi2a	90	95.620	Mola_mola
ENSPNAG00000000844	msi2b	78	80.676	ENSMODG00000014790	MSI2	100	84.615	Monodelphis_domestica
ENSPNAG00000000844	msi2b	100	95.425	ENSMALG00000000071	msi2a	100	96.296	Monopterus_albus
ENSPNAG00000000844	msi2b	100	88.450	MGP_CAROLIEiJ_G0016948	Msi2	100	99.115	Mus_caroli
ENSPNAG00000000844	msi2b	100	88.450	ENSMUSG00000069769	Msi2	100	99.115	Mus_musculus
ENSPNAG00000000844	msi2b	100	88.450	MGP_PahariEiJ_G0018079	Msi2	100	99.115	Mus_pahari
ENSPNAG00000000844	msi2b	100	88.450	MGP_SPRETEiJ_G0017795	Msi2	100	99.115	Mus_spretus
ENSPNAG00000000844	msi2b	93	93.515	ENSMPUG00000015377	MSI2	97	95.222	Mustela_putorius_furo
ENSPNAG00000000844	msi2b	93	93.515	ENSMLUG00000007865	MSI2	97	95.222	Myotis_lucifugus
ENSPNAG00000000844	msi2b	100	82.948	ENSNGAG00000017807	Msi2	100	85.303	Nannospalax_galili
ENSPNAG00000000844	msi2b	100	93.631	ENSNBRG00000014596	msi2a	100	93.631	Neolamprologus_brichardi
ENSPNAG00000000844	msi2b	93	92.478	ENSNLEG00000008059	MSI2	95	96.651	Nomascus_leucogenys
ENSPNAG00000000844	msi2b	65	86.184	ENSOPRG00000000872	-	64	86.184	Ochotona_princeps
ENSPNAG00000000844	msi2b	100	83.237	ENSODEG00000011974	MSI2	100	85.591	Octodon_degus
ENSPNAG00000000844	msi2b	56	86.093	ENSONIG00000001972	msi2a	84	96.026	Oreochromis_niloticus
ENSPNAG00000000844	msi2b	87	97.596	ENSOANG00000005667	MSI2	99	76.869	Ornithorhynchus_anatinus
ENSPNAG00000000844	msi2b	93	93.515	ENSOCUG00000010440	MSI2	97	95.222	Oryctolagus_cuniculus
ENSPNAG00000000844	msi2b	100	92.802	ENSORLG00000009671	msi2a	100	92.802	Oryzias_latipes
ENSPNAG00000000844	msi2b	100	91.720	ENSORLG00020021556	msi2a	100	96.296	Oryzias_latipes_hni
ENSPNAG00000000844	msi2b	100	92.802	ENSORLG00015004592	msi2a	100	92.802	Oryzias_latipes_hsok
ENSPNAG00000000844	msi2b	100	92.802	ENSOMEG00000000146	msi2a	100	96.296	Oryzias_melastigma
ENSPNAG00000000844	msi2b	93	88.737	ENSOGAG00000005621	MSI2	99	90.444	Otolemur_garnettii
ENSPNAG00000000844	msi2b	93	87.097	ENSPPAG00000037697	MSI2	100	89.711	Pan_paniscus
ENSPNAG00000000844	msi2b	93	93.515	ENSPPRG00000001848	MSI2	94	95.222	Panthera_pardus
ENSPNAG00000000844	msi2b	93	87.097	ENSPTIG00000021678	MSI2	96	89.711	Panthera_tigris_altaica
ENSPNAG00000000844	msi2b	71	76.623	ENSPTIG00000021873	-	90	77.637	Panthera_tigris_altaica
ENSPNAG00000000844	msi2b	93	92.920	ENSPTRG00000009437	MSI2	100	89.711	Pan_troglodytes
ENSPNAG00000000844	msi2b	100	88.754	ENSPANG00000022319	MSI2	100	90.274	Papio_anubis
ENSPNAG00000000844	msi2b	100	83.033	ENSPKIG00000007038	-	96	93.827	Paramormyrops_kingsleyae
ENSPNAG00000000844	msi2b	96	91.803	ENSPSIG00000008618	MSI2	100	88.206	Pelodiscus_sinensis
ENSPNAG00000000844	msi2b	100	93.631	ENSPMGG00000005888	msi2a	100	93.631	Periophthalmus_magnuspinnatus
ENSPNAG00000000844	msi2b	100	80.508	ENSPCIG00000006063	MSI2	100	83.662	Phascolarctos_cinereus
ENSPNAG00000000844	msi2b	54	80.000	ENSPFOG00000019337	MSI2	92	94.286	Poecilia_formosa
ENSPNAG00000000844	msi2b	56	81.818	ENSPLAG00000000436	msi2a	76	92.958	Poecilia_latipinna
ENSPNAG00000000844	msi2b	56	91.406	ENSPMEG00000013247	msi2a	80	91.406	Poecilia_mexicana
ENSPNAG00000000844	msi2b	99	91.720	ENSPREG00000000881	msi2a	99	91.720	Poecilia_reticulata
ENSPNAG00000000844	msi2b	93	89.121	ENSPPYG00000008244	-	100	91.213	Pongo_abelii
ENSPNAG00000000844	msi2b	76	65.272	ENSPCAG00000010552	MSI2	100	65.272	Procavia_capensis
ENSPNAG00000000844	msi2b	93	85.666	ENSPVAG00000017053	MSI2	99	87.372	Pteropus_vampyrus
ENSPNAG00000000844	msi2b	100	93.631	ENSPNYG00000018393	msi2a	100	95.885	Pundamilia_nyererei
ENSPNAG00000000844	msi2b	93	93.190	ENSRNOG00000025338	Msi2	100	94.982	Rattus_norvegicus
ENSPNAG00000000844	msi2b	93	93.333	ENSSBOG00000026425	MSI2	100	89.711	Saimiri_boliviensis_boliviensis
ENSPNAG00000000844	msi2b	93	86.452	ENSSHAG00000008672	MSI2	100	89.068	Sarcophilus_harrisii
ENSPNAG00000000844	msi2b	94	90.816	ENSSFOG00015021687	-	97	90.476	Scleropages_formosus
ENSPNAG00000000844	msi2b	95	85.537	ENSSFOG00015012168	msi2b	100	72.861	Scleropages_formosus
ENSPNAG00000000844	msi2b	100	93.949	ENSSMAG00000018484	msi2a	100	96.296	Scophthalmus_maximus
ENSPNAG00000000844	msi2b	100	85.714	ENSSDUG00000021968	-	99	94.702	Seriola_dumerili
ENSPNAG00000000844	msi2b	100	94.268	ENSSDUG00000014507	msi2a	100	96.296	Seriola_dumerili
ENSPNAG00000000844	msi2b	100	94.268	ENSSLDG00000017172	msi2a	100	94.268	Seriola_lalandi_dorsalis
ENSPNAG00000000844	msi2b	56	86.076	ENSSPUG00000000913	-	94	95.570	Sphenodon_punctatus
ENSPNAG00000000844	msi2b	100	87.961	ENSSPAG00000017793	msi2a	95	96.296	Stegastes_partitus
ENSPNAG00000000844	msi2b	100	88.754	ENSSSCG00000038505	MSI2	96	96.708	Sus_scrofa
ENSPNAG00000000844	msi2b	78	81.159	ENSTGUG00000008452	MSI2	100	85.096	Taeniopygia_guttata
ENSPNAG00000000844	msi2b	100	87.202	ENSTRUG00000021248	msi2a	100	87.202	Takifugu_rubripes
ENSPNAG00000000844	msi2b	72	76.471	ENSTBEG00000001241	MSI2	73	80.165	Tupaia_belangeri
ENSPNAG00000000844	msi2b	93	86.192	ENSTTRG00000002189	MSI2	91	97.368	Tursiops_truncatus
ENSPNAG00000000844	msi2b	93	93.515	ENSUAMG00000000700	MSI2	96	97.748	Ursus_americanus
ENSPNAG00000000844	msi2b	89	87.594	ENSUMAG00000000505	MSI2	95	97.409	Ursus_maritimus
ENSPNAG00000000844	msi2b	58	83.978	ENSVPAG00000006837	-	62	84.066	Vicugna_pacos
ENSPNAG00000000844	msi2b	93	93.493	ENSVVUG00000011783	MSI2	100	95.222	Vulpes_vulpes
ENSPNAG00000000844	msi2b	100	90.488	ENSXCOG00000006113	msi2a	100	90.488	Xiphophorus_couchianus
ENSPNAG00000000844	msi2b	96	93.667	ENSXMAG00000000608	msi2a	100	96.296	Xiphophorus_maculatus