EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000001055 (Gene tree)
Gene ID: 108440973
Gene Symbol: hnrnpub
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 9583 bases
Position: chrKV575666.1:639608-649190
Accession: 108440973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000001987	SAP	PF02037.27	3.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000011195	-	4984	XM_017720207	ENSPNAP00000001987	803 (aa)	XP_017575696	UPI0008147377

Gene Model

Click here to download ENSPNAG00000001055's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000001055's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000001055	hnrnpub	62	52.789	ENSPNAG00000019775	HNRNPUL1	71	46.189
ENSPNAG00000001055	hnrnpub	76	48.885	ENSPNAG00000030085	hnrnpul1	80	45.087

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000001055	hnrnpub	79	64.557	ENSG00000153187	HNRNPU	99	74.333	Homo_sapiens
ENSPNAG00000001055	hnrnpub	100	66.303	ENSAPOG00000017400	hnrnpub	100	67.467	Acanthochromis_polyacanthus
ENSPNAG00000001055	hnrnpub	79	61.503	ENSAMEG00000009145	HNRNPU	71	65.773	Ailuropoda_melanoleuca
ENSPNAG00000001055	hnrnpub	100	63.255	ENSACIG00000012138	hnrnpub	96	67.516	Amphilophus_citrinellus
ENSPNAG00000001055	hnrnpub	100	65.738	ENSAOCG00000015843	hnrnpub	100	67.227	Amphiprion_ocellaris
ENSPNAG00000001055	hnrnpub	100	65.738	ENSAPEG00000014679	hnrnpub	100	67.227	Amphiprion_percula
ENSPNAG00000001055	hnrnpub	98	66.091	ENSATEG00000016178	hnrnpub	97	67.448	Anabas_testudineus
ENSPNAG00000001055	hnrnpub	86	72.917	ENSACAG00000004511	HNRNPU	78	72.917	Anolis_carolinensis
ENSPNAG00000001055	hnrnpub	86	60.905	ENSANAG00000033895	-	98	61.216	Aotus_nancymaae
ENSPNAG00000001055	hnrnpub	100	66.135	ENSACLG00000008165	hnrnpub	100	66.707	Astatotilapia_calliptera
ENSPNAG00000001055	hnrnpub	79	64.196	ENSBTAG00000007606	HNRNPU	98	55.847	Bos_taurus
ENSPNAG00000001055	hnrnpub	79	64.241	ENSCJAG00000016914	HNRNPU	98	61.373	Callithrix_jacchus
ENSPNAG00000001055	hnrnpub	79	64.196	ENSCAFG00020000918	HNRNPU	99	56.206	Canis_lupus_dingo
ENSPNAG00000001055	hnrnpub	79	64.196	ENSCHIG00000004900	HNRNPU	99	56.257	Capra_hircus
ENSPNAG00000001055	hnrnpub	79	64.241	ENSCPOG00000011887	HNRNPU	73	65.231	Cavia_porcellus
ENSPNAG00000001055	hnrnpub	86	61.043	ENSCCAG00000037859	-	98	61.351	Cebus_capucinus
ENSPNAG00000001055	hnrnpub	86	61.454	ENSCATG00000035273	HNRNPU	98	61.216	Cercocebus_atys
ENSPNAG00000001055	hnrnpub	79	64.241	ENSCLAG00000007100	HNRNPU	73	65.231	Chinchilla_lanigera
ENSPNAG00000001055	hnrnpub	79	64.399	ENSCSAG00000009219	HNRNPU	99	55.972	Chlorocebus_sabaeus
ENSPNAG00000001055	hnrnpub	85	75.000	ENSCHOG00000001387	HNRNPU	77	75.000	Choloepus_hoffmanni
ENSPNAG00000001055	hnrnpub	92	62.064	ENSCPBG00000009415	HNRNPU	79	65.391	Chrysemys_picta_bellii
ENSPNAG00000001055	hnrnpub	92	64.399	ENSCANG00000022780	HNRNPU	98	61.022	Colobus_angolensis_palliatus
ENSPNAG00000001055	hnrnpub	81	62.957	ENSCGRG00001020525	Hnrnpu	99	56.434	Cricetulus_griseus_chok1gshd
ENSPNAG00000001055	hnrnpub	77	93.617	ENSCSEG00000010804	hnrnpub	100	63.594	Cynoglossus_semilaevis
ENSPNAG00000001055	hnrnpub	89	73.585	ENSCVAG00000004280	hnrnpub	100	51.961	Cyprinodon_variegatus
ENSPNAG00000001055	hnrnpub	100	67.600	ENSDARG00000004735	hnrnpub	100	67.422	Danio_rerio
ENSPNAG00000001055	hnrnpub	100	65.361	ENSDARG00000015206	hnrnpua	100	65.356	Danio_rerio
ENSPNAG00000001055	hnrnpub	99	57.640	ENSDNOG00000000215	HNRNPU	86	80.851	Dasypus_novemcinctus
ENSPNAG00000001055	hnrnpub	79	64.082	ENSDORG00000015491	Hnrnpu	99	58.000	Dipodomys_ordii
ENSPNAG00000001055	hnrnpub	99	55.376	ENSETEG00000014565	HNRNPU	78	80.851	Echinops_telfairi
ENSPNAG00000001055	hnrnpub	80	63.721	ENSEASG00005003017	HNRNPU	99	57.110	Equus_asinus_asinus
ENSPNAG00000001055	hnrnpub	80	63.721	ENSECAG00000007955	HNRNPU	99	57.110	Equus_caballus
ENSPNAG00000001055	hnrnpub	100	65.176	ENSELUG00000010733	hnrnpub	100	66.513	Esox_lucius
ENSPNAG00000001055	hnrnpub	100	63.041	ENSELUG00000011966	hnrnpua	100	59.630	Esox_lucius
ENSPNAG00000001055	hnrnpub	79	64.038	ENSFCAG00000002156	HNRNPU	99	56.140	Felis_catus
ENSPNAG00000001055	hnrnpub	92	69.841	ENSFDAG00000006026	HNRNPU	99	69.841	Fukomys_damarensis
ENSPNAG00000001055	hnrnpub	100	62.678	ENSFHEG00000022639	hnrnpub	100	63.744	Fundulus_heteroclitus
ENSPNAG00000001055	hnrnpub	83	64.069	ENSGMOG00000001755	hnrnpub	99	62.322	Gadus_morhua
ENSPNAG00000001055	hnrnpub	87	78.723	ENSGALG00000010671	HNRNPU	77	78.723	Gallus_gallus
ENSPNAG00000001055	hnrnpub	100	60.400	ENSGAFG00000009369	hnrnpub	100	63.615	Gambusia_affinis
ENSPNAG00000001055	hnrnpub	100	61.512	ENSGACG00000004679	hnrnpub	99	60.759	Gasterosteus_aculeatus
ENSPNAG00000001055	hnrnpub	80	68.254	ENSGGOG00000004061	HNRNPU	98	61.351	Gorilla_gorilla
ENSPNAG00000001055	hnrnpub	100	66.258	ENSHBUG00000012290	hnrnpub	100	67.072	Haplochromis_burtoni
ENSPNAG00000001055	hnrnpub	81	63.037	ENSHGLG00000010594	-	99	58.148	Heterocephalus_glaber_female
ENSPNAG00000001055	hnrnpub	90	76.923	ENSHGLG00100015093	HNRNPU	99	82.979	Heterocephalus_glaber_male
ENSPNAG00000001055	hnrnpub	83	65.116	ENSHCOG00000020091	hnrnpub	100	63.377	Hippocampus_comes
ENSPNAG00000001055	hnrnpub	100	84.054	ENSIPUG00000007749	hnrnpu	100	84.178	Ictalurus_punctatus
ENSPNAG00000001055	hnrnpub	84	83.721	ENSJJAG00000011371	Hnrnpu	88	64.787	Jaculus_jaculus
ENSPNAG00000001055	hnrnpub	100	62.830	ENSKMAG00000004532	hnrnpub	100	65.352	Kryptolebias_marmoratus
ENSPNAG00000001055	hnrnpub	83	69.465	ENSLBEG00000022520	hnrnpub	100	66.150	Labrus_bergylta
ENSPNAG00000001055	hnrnpub	80	56.966	ENSLACG00000017463	HNRNPU	99	51.001	Latimeria_chalumnae
ENSPNAG00000001055	hnrnpub	84	77.745	ENSLOCG00000016652	hnrnpua	99	70.735	Lepisosteus_oculatus
ENSPNAG00000001055	hnrnpub	93	64.196	ENSLAFG00000021377	HNRNPU	78	80.851	Loxodonta_africana
ENSPNAG00000001055	hnrnpub	86	61.454	ENSMFAG00000037308	HNRNPU	98	61.216	Macaca_fascicularis
ENSPNAG00000001055	hnrnpub	79	64.399	ENSMMUG00000021098	HNRNPU	99	57.193	Macaca_mulatta
ENSPNAG00000001055	hnrnpub	86	61.454	ENSMNEG00000043645	HNRNPU	98	61.216	Macaca_nemestrina
ENSPNAG00000001055	hnrnpub	100	61.021	ENSMAMG00000007196	hnrnpub	100	67.509	Mastacembelus_armatus
ENSPNAG00000001055	hnrnpub	100	66.135	ENSMZEG00005003185	hnrnpub	100	66.707	Maylandia_zebra
ENSPNAG00000001055	hnrnpub	81	62.957	ENSMAUG00000008842	Hnrnpu	99	56.655	Mesocricetus_auratus
ENSPNAG00000001055	hnrnpub	99	56.893	ENSMICG00000004616	HNRNPU	99	57.444	Microcebus_murinus
ENSPNAG00000001055	hnrnpub	81	63.287	ENSMOCG00000015623	Hnrnpu	99	57.193	Microtus_ochrogaster
ENSPNAG00000001055	hnrnpub	86	66.667	ENSMODG00000006515	HNRNPU	77	78.723	Monodelphis_domestica
ENSPNAG00000001055	hnrnpub	97	65.609	ENSMALG00000018243	hnrnpub	98	66.918	Monopterus_albus
ENSPNAG00000001055	hnrnpub	79	64.353	MGP_CAROLIEiJ_G0014962	Hnrnpu	99	56.978	Mus_caroli
ENSPNAG00000001055	hnrnpub	79	64.353	ENSMUSG00000039630	Hnrnpu	99	56.471	Mus_musculus
ENSPNAG00000001055	hnrnpub	79	64.082	MGP_PahariEiJ_G0028193	Hnrnpu	99	56.826	Mus_pahari
ENSPNAG00000001055	hnrnpub	79	64.353	MGP_SPRETEiJ_G0015761	Hnrnpu	99	56.471	Mus_spretus
ENSPNAG00000001055	hnrnpub	86	66.667	ENSMLUG00000000475	HNRNPU	79	78.723	Myotis_lucifugus
ENSPNAG00000001055	hnrnpub	99	56.198	ENSNGAG00000019075	Hnrnpu	99	57.025	Nannospalax_galili
ENSPNAG00000001055	hnrnpub	100	66.135	ENSNBRG00000017855	hnrnpub	100	66.707	Neolamprologus_brichardi
ENSPNAG00000001055	hnrnpub	81	66.667	ENSMEUG00000000541	HNRNPU	77	78.723	Notamacropus_eugenii
ENSPNAG00000001055	hnrnpub	100	66.135	ENSONIG00000001260	hnrnpub	100	66.341	Oreochromis_niloticus
ENSPNAG00000001055	hnrnpub	77	64.090	ENSOCUG00000014469	HNRNPU	67	64.465	Oryctolagus_cuniculus
ENSPNAG00000001055	hnrnpub	100	64.192	ENSORLG00000016114	hnrnpub	100	66.546	Oryzias_latipes
ENSPNAG00000001055	hnrnpub	83	68.940	ENSORLG00020005363	hnrnpub	100	66.546	Oryzias_latipes_hni
ENSPNAG00000001055	hnrnpub	83	68.795	ENSORLG00015001190	hnrnpub	100	65.981	Oryzias_latipes_hsok
ENSPNAG00000001055	hnrnpub	83	69.869	ENSOMEG00000014951	hnrnpub	100	65.901	Oryzias_melastigma
ENSPNAG00000001055	hnrnpub	99	56.647	ENSOGAG00000014024	HNRNPU	99	56.506	Otolemur_garnettii
ENSPNAG00000001055	hnrnpub	86	68.254	ENSOARG00000004985	HNRNPU	87	68.254	Ovis_aries
ENSPNAG00000001055	hnrnpub	86	61.043	ENSPPAG00000038652	HNRNPU	98	61.351	Pan_paniscus
ENSPNAG00000001055	hnrnpub	81	63.077	ENSPPRG00000002662	HNRNPU	72	64.724	Panthera_pardus
ENSPNAG00000001055	hnrnpub	86	61.043	ENSPTRG00000002182	HNRNPU	98	61.351	Pan_troglodytes
ENSPNAG00000001055	hnrnpub	86	61.454	ENSPANG00000011643	HNRNPU	98	61.216	Papio_anubis
ENSPNAG00000001055	hnrnpub	100	73.447	ENSPKIG00000022332	hnrnpub	100	73.601	Paramormyrops_kingsleyae
ENSPNAG00000001055	hnrnpub	100	73.382	ENSPKIG00000006885	hnrnpua	100	73.529	Paramormyrops_kingsleyae
ENSPNAG00000001055	hnrnpub	86	66.667	ENSPCIG00000008657	HNRNPU	77	78.723	Phascolarctos_cinereus
ENSPNAG00000001055	hnrnpub	100	60.599	ENSPFOG00000002908	hnrnpub	100	64.748	Poecilia_formosa
ENSPNAG00000001055	hnrnpub	100	60.192	ENSPLAG00000004160	hnrnpub	100	64.946	Poecilia_latipinna
ENSPNAG00000001055	hnrnpub	99	55.244	ENSPCOG00000018655	-	99	56.842	Propithecus_coquereli
ENSPNAG00000001055	hnrnpub	79	64.038	ENSPVAG00000002581	HNRNPU	72	64.724	Pteropus_vampyrus
ENSPNAG00000001055	hnrnpub	100	66.503	ENSPNYG00000021642	hnrnpub	100	67.072	Pundamilia_nyererei
ENSPNAG00000001055	hnrnpub	79	64.353	ENSRNOG00000033790	Hnrnpu	99	56.604	Rattus_norvegicus
ENSPNAG00000001055	hnrnpub	86	60.905	ENSRBIG00000031519	HNRNPU	98	60.811	Rhinopithecus_bieti
ENSPNAG00000001055	hnrnpub	86	60.982	ENSRROG00000041642	HNRNPU	98	61.022	Rhinopithecus_roxellana
ENSPNAG00000001055	hnrnpub	100	73.608	ENSSFOG00015019004	hnrnpu	100	73.455	Scleropages_formosus
ENSPNAG00000001055	hnrnpub	100	74.334	ENSSFOG00015001124	hnrnpub	100	74.484	Scleropages_formosus
ENSPNAG00000001055	hnrnpub	83	68.931	ENSSMAG00000003607	hnrnpub	100	64.385	Scophthalmus_maximus
ENSPNAG00000001055	hnrnpub	83	62.534	ENSSDUG00000005912	hnrnpub	100	67.223	Seriola_dumerili
ENSPNAG00000001055	hnrnpub	83	62.397	ENSSLDG00000004899	hnrnpub	100	66.351	Seriola_lalandi_dorsalis
ENSPNAG00000001055	hnrnpub	84	85.000	ENSSPUG00000011393	HNRNPU	79	78.723	Sphenodon_punctatus
ENSPNAG00000001055	hnrnpub	100	62.530	ENSSPAG00000011853	hnrnpub	100	67.431	Stegastes_partitus
ENSPNAG00000001055	hnrnpub	79	64.038	ENSSSCG00000010877	HNRNPU	99	56.381	Sus_scrofa
ENSPNAG00000001055	hnrnpub	100	64.149	ENSTRUG00000007759	hnrnpub	100	65.505	Takifugu_rubripes
ENSPNAG00000001055	hnrnpub	100	61.408	ENSTNIG00000009725	hnrnpub	100	62.198	Tetraodon_nigroviridis
ENSPNAG00000001055	hnrnpub	99	58.072	ENSUAMG00000021120	HNRNPU	99	58.838	Ursus_americanus
ENSPNAG00000001055	hnrnpub	100	63.224	ENSUMAG00000012322	HNRNPU	100	58.759	Ursus_maritimus
ENSPNAG00000001055	hnrnpub	89	59.348	ENSVPAG00000010520	HNRNPU	82	80.851	Vicugna_pacos
ENSPNAG00000001055	hnrnpub	76	68.441	ENSVVUG00000026524	HNRNPU	99	56.206	Vulpes_vulpes
ENSPNAG00000001055	hnrnpub	99	53.533	ENSXETG00000011386	hnrnpu	75	61.719	Xenopus_tropicalis
ENSPNAG00000001055	hnrnpub	100	62.724	ENSXMAG00000010356	hnrnpub	100	64.508	Xiphophorus_maculatus