EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000001120 (Gene tree)
Gene ID: 108424089
Gene Symbol: sbds
Alias: zgc:56700
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 12848 bases
Position: chrKV575306.1:3389588-3402435
Accession: 108424089
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000002154	SBDS	PF01172.18	5.5e-34	1	1
ENSPNAP00000002154	SBDS_C	PF09377.10	3.9e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000010922	-	4415	XM_017691880	ENSPNAP00000002154	250 (aa)	XP_017547369	UPI0008145D97

Gene Model

Click here to download ENSPNAG00000001120's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000001120's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000001120	sbds	100	85.200	ENSG00000126524	SBDS	100	85.200	Homo_sapiens
ENSPNAG00000001120	sbds	99	93.976	ENSAPOG00000014285	sbds	100	93.976	Acanthochromis_polyacanthus
ENSPNAG00000001120	sbds	100	85.600	ENSAMEG00000018167	SBDS	100	85.600	Ailuropoda_melanoleuca
ENSPNAG00000001120	sbds	99	91.270	ENSACIG00000007308	sbds	100	91.270	Amphilophus_citrinellus
ENSPNAG00000001120	sbds	99	93.173	ENSAOCG00000016770	sbds	100	93.173	Amphiprion_ocellaris
ENSPNAG00000001120	sbds	99	93.574	ENSAPEG00000015897	sbds	100	93.574	Amphiprion_percula
ENSPNAG00000001120	sbds	99	92.771	ENSATEG00000006901	sbds	100	92.771	Anabas_testudineus
ENSPNAG00000001120	sbds	83	84.541	ENSANAG00000037501	-	100	84.541	Aotus_nancymaae
ENSPNAG00000001120	sbds	92	79.654	ENSANAG00000024342	-	97	79.654	Aotus_nancymaae
ENSPNAG00000001120	sbds	99	93.173	ENSACLG00000018750	sbds	100	93.173	Astatotilapia_calliptera
ENSPNAG00000001120	sbds	100	94.000	ENSAMXG00000005361	sbds	100	94.000	Astyanax_mexicanus
ENSPNAG00000001120	sbds	100	85.200	ENSBTAG00000004051	SBDS	100	85.200	Bos_taurus
ENSPNAG00000001120	sbds	98	57.317	WBGene00021063	sbds-1	97	57.317	Caenorhabditis_elegans
ENSPNAG00000001120	sbds	100	85.200	ENSCJAG00000041007	SBDS	100	85.200	Callithrix_jacchus
ENSPNAG00000001120	sbds	100	83.730	ENSCAFG00000010797	SBDS	100	83.730	Canis_familiaris
ENSPNAG00000001120	sbds	100	85.600	ENSCAFG00020005357	SBDS	100	85.600	Canis_lupus_dingo
ENSPNAG00000001120	sbds	100	85.200	ENSCHIG00000026854	SBDS	100	85.200	Capra_hircus
ENSPNAG00000001120	sbds	100	85.200	ENSTSYG00000033822	SBDS	100	85.200	Carlito_syrichta
ENSPNAG00000001120	sbds	66	85.366	ENSCAPG00000006634	SBDS	100	85.366	Cavia_aperea
ENSPNAG00000001120	sbds	100	86.000	ENSCPOG00000036143	SBDS	100	86.000	Cavia_porcellus
ENSPNAG00000001120	sbds	100	85.200	ENSCCAG00000020671	SBDS	100	85.200	Cebus_capucinus
ENSPNAG00000001120	sbds	100	85.200	ENSCATG00000039026	SBDS	100	85.200	Cercocebus_atys
ENSPNAG00000001120	sbds	100	86.400	ENSCLAG00000005721	-	100	86.400	Chinchilla_lanigera
ENSPNAG00000001120	sbds	99	61.694	ENSCLAG00000002113	-	99	61.694	Chinchilla_lanigera
ENSPNAG00000001120	sbds	100	85.200	ENSCSAG00000018275	SBDS	100	85.200	Chlorocebus_sabaeus
ENSPNAG00000001120	sbds	100	80.800	ENSCHOG00000003795	SBDS	100	80.800	Choloepus_hoffmanni
ENSPNAG00000001120	sbds	100	87.200	ENSCPBG00000014893	SBDS	100	87.200	Chrysemys_picta_bellii
ENSPNAG00000001120	sbds	99	68.145	ENSCSAVG00000011811	-	99	68.145	Ciona_savignyi
ENSPNAG00000001120	sbds	100	84.800	ENSCANG00000032368	SBDS	100	84.800	Colobus_angolensis_palliatus
ENSPNAG00000001120	sbds	66	84.146	ENSCGRG00001019886	Sbds	100	84.146	Cricetulus_griseus_chok1gshd
ENSPNAG00000001120	sbds	83	84.541	ENSCGRG00000009211	Sbds	100	84.541	Cricetulus_griseus_crigri
ENSPNAG00000001120	sbds	99	90.361	ENSCSEG00000005798	sbds	100	90.361	Cynoglossus_semilaevis
ENSPNAG00000001120	sbds	99	89.960	ENSCVAG00000001053	sbds	100	89.960	Cyprinodon_variegatus
ENSPNAG00000001120	sbds	100	92.400	ENSDARG00000027803	sbds	100	92.400	Danio_rerio
ENSPNAG00000001120	sbds	100	85.200	ENSDNOG00000041174	SBDS	100	85.200	Dasypus_novemcinctus
ENSPNAG00000001120	sbds	100	86.400	ENSDORG00000026218	Sbds	100	86.400	Dipodomys_ordii
ENSPNAG00000001120	sbds	90	62.281	FBgn0035714	CG8549	98	62.348	Drosophila_melanogaster
ENSPNAG00000001120	sbds	93	59.657	ENSEBUG00000015780	sbds	100	59.657	Eptatretus_burgeri
ENSPNAG00000001120	sbds	100	85.200	ENSEASG00005008821	SBDS	100	85.200	Equus_asinus_asinus
ENSPNAG00000001120	sbds	100	85.200	ENSECAG00000008202	SBDS	100	85.200	Equus_caballus
ENSPNAG00000001120	sbds	83	65.385	ENSEEUG00000004768	SBDS	100	65.385	Erinaceus_europaeus
ENSPNAG00000001120	sbds	100	91.600	ENSELUG00000008382	sbds	100	91.600	Esox_lucius
ENSPNAG00000001120	sbds	100	85.200	ENSFCAG00000022142	SBDS	100	85.200	Felis_catus
ENSPNAG00000001120	sbds	100	88.000	ENSFALG00000013808	SBDS	100	88.000	Ficedula_albicollis
ENSPNAG00000001120	sbds	100	86.000	ENSFDAG00000018947	-	100	86.000	Fukomys_damarensis
ENSPNAG00000001120	sbds	99	86.345	ENSFHEG00000000708	sbds	100	86.345	Fundulus_heteroclitus
ENSPNAG00000001120	sbds	100	90.400	ENSGMOG00000018356	sbds	99	90.400	Gadus_morhua
ENSPNAG00000001120	sbds	100	86.400	ENSGALG00000027989	SBDS	100	86.400	Gallus_gallus
ENSPNAG00000001120	sbds	92	85.652	ENSGAFG00000014204	sbds	100	85.652	Gambusia_affinis
ENSPNAG00000001120	sbds	99	89.558	ENSGACG00000012697	sbds	100	89.558	Gasterosteus_aculeatus
ENSPNAG00000001120	sbds	86	87.850	ENSGAGG00000022402	SBDS	100	87.850	Gopherus_agassizii
ENSPNAG00000001120	sbds	96	68.050	ENSGGOG00000040023	-	92	68.050	Gorilla_gorilla
ENSPNAG00000001120	sbds	99	93.173	ENSHBUG00000002660	sbds	100	93.173	Haplochromis_burtoni
ENSPNAG00000001120	sbds	100	84.800	ENSHGLG00000009671	SBDS	100	84.800	Heterocephalus_glaber_female
ENSPNAG00000001120	sbds	100	84.800	ENSHGLG00100011332	SBDS	100	84.800	Heterocephalus_glaber_male
ENSPNAG00000001120	sbds	99	87.149	ENSHCOG00000018606	sbds	100	87.149	Hippocampus_comes
ENSPNAG00000001120	sbds	100	93.600	ENSIPUG00000006536	sbds	100	93.600	Ictalurus_punctatus
ENSPNAG00000001120	sbds	100	62.846	ENSJJAG00000003934	-	100	62.846	Jaculus_jaculus
ENSPNAG00000001120	sbds	100	82.800	ENSJJAG00000012033	-	100	82.800	Jaculus_jaculus
ENSPNAG00000001120	sbds	99	91.566	ENSKMAG00000018542	sbds	100	91.566	Kryptolebias_marmoratus
ENSPNAG00000001120	sbds	99	89.558	ENSLBEG00000016687	sbds	100	89.558	Labrus_bergylta
ENSPNAG00000001120	sbds	100	74.803	ENSLACG00000018916	SBDS	100	74.803	Latimeria_chalumnae
ENSPNAG00000001120	sbds	100	92.800	ENSLOCG00000004073	sbds	100	92.800	Lepisosteus_oculatus
ENSPNAG00000001120	sbds	100	85.600	ENSLAFG00000008763	SBDS	100	85.600	Loxodonta_africana
ENSPNAG00000001120	sbds	100	85.200	ENSMFAG00000032620	SBDS	100	85.200	Macaca_fascicularis
ENSPNAG00000001120	sbds	100	85.200	ENSMMUG00000045653	SBDS	100	85.200	Macaca_mulatta
ENSPNAG00000001120	sbds	100	85.200	ENSMNEG00000031523	SBDS	100	85.200	Macaca_nemestrina
ENSPNAG00000001120	sbds	100	66.929	ENSMLEG00000036826	SBDS	100	66.929	Mandrillus_leucophaeus
ENSPNAG00000001120	sbds	99	92.369	ENSMAMG00000016062	sbds	100	92.369	Mastacembelus_armatus
ENSPNAG00000001120	sbds	99	93.173	ENSMZEG00005024385	sbds	100	93.173	Maylandia_zebra
ENSPNAG00000001120	sbds	100	86.400	ENSMGAG00000002119	SBDS	100	86.400	Meleagris_gallopavo
ENSPNAG00000001120	sbds	99	69.478	ENSMAUG00000022214	-	100	69.478	Mesocricetus_auratus
ENSPNAG00000001120	sbds	100	85.200	ENSMICG00000014366	SBDS	100	85.200	Microcebus_murinus
ENSPNAG00000001120	sbds	100	85.600	ENSMOCG00000011739	Sbds	100	85.600	Microtus_ochrogaster
ENSPNAG00000001120	sbds	99	82.400	ENSMMOG00000005061	sbds	100	82.400	Mola_mola
ENSPNAG00000001120	sbds	100	86.800	ENSMODG00000006644	SBDS	100	86.800	Monodelphis_domestica
ENSPNAG00000001120	sbds	99	88.353	ENSMALG00000010219	sbds	100	88.353	Monopterus_albus
ENSPNAG00000001120	sbds	100	86.400	MGP_CAROLIEiJ_G0027800	Sbds	98	92.857	Mus_caroli
ENSPNAG00000001120	sbds	100	86.000	ENSMUSG00000025337	Sbds	98	92.857	Mus_musculus
ENSPNAG00000001120	sbds	100	86.400	MGP_PahariEiJ_G0024384	Sbds	98	92.857	Mus_pahari
ENSPNAG00000001120	sbds	100	86.000	MGP_SPRETEiJ_G0028798	Sbds	98	92.857	Mus_spretus
ENSPNAG00000001120	sbds	67	86.310	ENSMPUG00000016192	SBDS	97	86.310	Mustela_putorius_furo
ENSPNAG00000001120	sbds	73	81.868	ENSMLUG00000013575	SBDS	100	81.868	Myotis_lucifugus
ENSPNAG00000001120	sbds	100	86.400	ENSNGAG00000012093	Sbds	100	86.400	Nannospalax_galili
ENSPNAG00000001120	sbds	99	93.173	ENSNBRG00000017027	sbds	100	93.173	Neolamprologus_brichardi
ENSPNAG00000001120	sbds	100	85.200	ENSNLEG00000013288	SBDS	100	85.200	Nomascus_leucogenys
ENSPNAG00000001120	sbds	100	85.600	ENSOPRG00000008721	SBDS	100	85.600	Ochotona_princeps
ENSPNAG00000001120	sbds	99	67.470	ENSODEG00000001116	-	99	67.470	Octodon_degus
ENSPNAG00000001120	sbds	99	65.060	ENSODEG00000000137	-	84	68.273	Octodon_degus
ENSPNAG00000001120	sbds	100	77.600	ENSODEG00000019253	-	84	77.600	Octodon_degus
ENSPNAG00000001120	sbds	99	93.173	ENSONIG00000005874	sbds	100	93.173	Oreochromis_niloticus
ENSPNAG00000001120	sbds	83	84.541	ENSOANG00000007674	-	100	84.541	Ornithorhynchus_anatinus
ENSPNAG00000001120	sbds	100	87.200	ENSOCUG00000003170	SBDS	100	87.200	Oryctolagus_cuniculus
ENSPNAG00000001120	sbds	99	87.149	ENSORLG00000023489	sbds	100	87.149	Oryzias_latipes
ENSPNAG00000001120	sbds	99	86.747	ENSORLG00020019282	sbds	100	86.747	Oryzias_latipes_hni
ENSPNAG00000001120	sbds	99	86.747	ENSORLG00015008005	sbds	100	86.747	Oryzias_latipes_hsok
ENSPNAG00000001120	sbds	99	87.952	ENSOMEG00000022747	sbds	100	87.952	Oryzias_melastigma
ENSPNAG00000001120	sbds	100	73.600	ENSOGAG00000015036	-	100	73.600	Otolemur_garnettii
ENSPNAG00000001120	sbds	100	85.600	ENSOGAG00000009011	-	100	85.600	Otolemur_garnettii
ENSPNAG00000001120	sbds	100	85.200	ENSOARG00000010609	SBDS	100	85.200	Ovis_aries
ENSPNAG00000001120	sbds	100	84.400	ENSPPAG00000043889	-	100	84.400	Pan_paniscus
ENSPNAG00000001120	sbds	100	85.200	ENSPPRG00000002307	SBDS	100	85.200	Panthera_pardus
ENSPNAG00000001120	sbds	100	85.200	ENSPTIG00000021308	SBDS	100	85.200	Panthera_tigris_altaica
ENSPNAG00000001120	sbds	100	72.000	ENSPTRG00000047744	-	100	72.000	Pan_troglodytes
ENSPNAG00000001120	sbds	100	72.000	ENSPTRG00000050835	-	100	72.000	Pan_troglodytes
ENSPNAG00000001120	sbds	87	82.028	ENSPTRG00000048174	-	96	82.028	Pan_troglodytes
ENSPNAG00000001120	sbds	100	85.200	ENSPTRG00000019254	SBDS	100	85.200	Pan_troglodytes
ENSPNAG00000001120	sbds	100	85.200	ENSPANG00000004078	SBDS	100	85.200	Papio_anubis
ENSPNAG00000001120	sbds	100	93.600	ENSPKIG00000006489	sbds	100	93.600	Paramormyrops_kingsleyae
ENSPNAG00000001120	sbds	83	86.538	ENSPSIG00000014603	SBDS	100	86.538	Pelodiscus_sinensis
ENSPNAG00000001120	sbds	99	91.968	ENSPMGG00000004246	sbds	100	91.968	Periophthalmus_magnuspinnatus
ENSPNAG00000001120	sbds	100	86.400	ENSPEMG00000008728	Sbds	100	86.400	Peromyscus_maniculatus_bairdii
ENSPNAG00000001120	sbds	100	88.000	ENSPCIG00000029718	SBDS	100	88.000	Phascolarctos_cinereus
ENSPNAG00000001120	sbds	99	88.353	ENSPFOG00000015837	sbds	100	88.353	Poecilia_formosa
ENSPNAG00000001120	sbds	99	88.755	ENSPLAG00000003641	sbds	100	88.755	Poecilia_latipinna
ENSPNAG00000001120	sbds	99	88.353	ENSPMEG00000019483	sbds	100	88.353	Poecilia_mexicana
ENSPNAG00000001120	sbds	99	88.353	ENSPREG00000018758	sbds	100	88.353	Poecilia_reticulata
ENSPNAG00000001120	sbds	100	85.200	ENSPPYG00000017513	SBDS	100	85.200	Pongo_abelii
ENSPNAG00000001120	sbds	100	84.800	ENSPCOG00000021098	SBDS	100	84.800	Propithecus_coquereli
ENSPNAG00000001120	sbds	100	85.600	ENSPVAG00000009369	SBDS	100	85.600	Pteropus_vampyrus
ENSPNAG00000001120	sbds	99	92.771	ENSPNYG00000022403	sbds	100	92.771	Pundamilia_nyererei
ENSPNAG00000001120	sbds	100	86.400	ENSRNOG00000000888	Sbds	100	86.400	Rattus_norvegicus
ENSPNAG00000001120	sbds	100	85.200	ENSRBIG00000035557	SBDS	100	85.200	Rhinopithecus_bieti
ENSPNAG00000001120	sbds	100	85.200	ENSRROG00000040842	-	100	85.200	Rhinopithecus_roxellana
ENSPNAG00000001120	sbds	100	68.800	ENSRROG00000041986	-	100	68.800	Rhinopithecus_roxellana
ENSPNAG00000001120	sbds	96	43.496	YLR022C	-	96	43.496	Saccharomyces_cerevisiae
ENSPNAG00000001120	sbds	93	83.190	ENSSBOG00000022460	SBDS	100	83.190	Saimiri_boliviensis_boliviensis
ENSPNAG00000001120	sbds	100	75.600	ENSSHAG00000010263	SBDS	100	75.600	Sarcophilus_harrisii
ENSPNAG00000001120	sbds	100	94.400	ENSSFOG00015001108	sbds	100	94.400	Scleropages_formosus
ENSPNAG00000001120	sbds	99	89.960	ENSSMAG00000020506	sbds	100	89.960	Scophthalmus_maximus
ENSPNAG00000001120	sbds	99	91.566	ENSSDUG00000001528	sbds	100	91.566	Seriola_dumerili
ENSPNAG00000001120	sbds	99	91.165	ENSSLDG00000003659	sbds	100	91.165	Seriola_lalandi_dorsalis
ENSPNAG00000001120	sbds	73	88.372	ENSSARG00000001899	-	73	88.372	Sorex_araneus
ENSPNAG00000001120	sbds	61	87.582	ENSSARG00000013132	-	100	87.582	Sorex_araneus
ENSPNAG00000001120	sbds	100	84.400	ENSSPUG00000002699	SBDS	100	84.400	Sphenodon_punctatus
ENSPNAG00000001120	sbds	99	92.771	ENSSPAG00000016419	sbds	100	84.739	Stegastes_partitus
ENSPNAG00000001120	sbds	100	85.200	ENSSSCG00000007732	SBDS	100	85.200	Sus_scrofa
ENSPNAG00000001120	sbds	66	89.091	ENSTGUG00000003426	SBDS	99	89.091	Taeniopygia_guttata
ENSPNAG00000001120	sbds	99	91.968	ENSTRUG00000021443	sbds	100	91.968	Takifugu_rubripes
ENSPNAG00000001120	sbds	99	92.771	ENSTNIG00000019000	sbds	100	92.771	Tetraodon_nigroviridis
ENSPNAG00000001120	sbds	83	72.115	ENSTBEG00000001178	SBDS	100	72.115	Tupaia_belangeri
ENSPNAG00000001120	sbds	100	67.600	ENSTTRG00000003921	SBDS	100	67.600	Tursiops_truncatus
ENSPNAG00000001120	sbds	100	85.600	ENSUAMG00000001326	SBDS	100	85.600	Ursus_americanus
ENSPNAG00000001120	sbds	100	85.600	ENSUMAG00000015353	SBDS	100	85.600	Ursus_maritimus
ENSPNAG00000001120	sbds	100	85.600	ENSVVUG00000016478	SBDS	100	85.600	Vulpes_vulpes
ENSPNAG00000001120	sbds	100	88.400	ENSXETG00000010093	sbds	100	88.400	Xenopus_tropicalis
ENSPNAG00000001120	sbds	99	79.518	ENSXCOG00000010639	sbds	100	79.518	Xiphophorus_couchianus
ENSPNAG00000001120	sbds	99	89.157	ENSXMAG00000006065	sbds	100	89.157	Xiphophorus_maculatus