EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000001123 (Gene tree)
Gene ID: 108429350
Gene Symbol: -
Alias: -
Full Name: GTP-binding protein SAR1b-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 5244 bases
Position: chrKV575289.1:7169844-7175087
Accession: 108429350
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000002167	MMR_HSR1	PF01926.23	7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000010898	-	2717	XM_017701042	ENSPNAP00000002167	198 (aa)	XP_017556531	UPI0008149B0C

Gene Model

Click here to download ENSPNAG00000001123's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000001123's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000001123	-	88	34.286	ENSPNAG00000005054	-	91	34.286
ENSPNAG00000001123	-	86	33.523	ENSPNAG00000007188	ARL4D	78	33.523
ENSPNAG00000001123	-	94	31.915	ENSPNAG00000022337	-	91	31.915
ENSPNAG00000001123	-	94	30.108	ENSPNAG00000013238	arl3l1	93	30.108
ENSPNAG00000001123	-	88	33.714	ENSPNAG00000004475	-	91	33.714
ENSPNAG00000001123	-	88	32.000	ENSPNAG00000025213	arl11	93	32.000
ENSPNAG00000001123	-	92	32.240	ENSPNAG00000019262	arl2	93	32.240
ENSPNAG00000001123	-	100	88.384	ENSPNAG00000014683	sar1b	100	88.384
ENSPNAG00000001123	-	86	30.994	ENSPNAG00000004165	-	97	30.851
ENSPNAG00000001123	-	88	30.114	ENSPNAG00000028795	arl1	98	30.114
ENSPNAG00000001123	-	72	35.570	ENSPNAG00000009887	arl4ab	75	35.570
ENSPNAG00000001123	-	87	31.977	ENSPNAG00000024427	-	89	31.977
ENSPNAG00000001123	-	100	86.869	ENSPNAG00000008007	sar1ab	100	86.869

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000001123	-	100	92.424	ENSAPOG00000017891	-	100	92.424	Acanthochromis_polyacanthus
ENSPNAG00000001123	-	100	86.364	ENSAPOG00000007186	sar1b	100	86.364	Acanthochromis_polyacanthus
ENSPNAG00000001123	-	100	86.364	ENSACIG00000013634	sar1b	100	86.364	Amphilophus_citrinellus
ENSPNAG00000001123	-	100	89.899	ENSACIG00000024513	-	100	89.899	Amphilophus_citrinellus
ENSPNAG00000001123	-	100	92.424	ENSAOCG00000002627	-	100	92.424	Amphiprion_ocellaris
ENSPNAG00000001123	-	100	85.859	ENSAOCG00000005888	sar1b	100	85.859	Amphiprion_ocellaris
ENSPNAG00000001123	-	100	85.859	ENSAPEG00000022771	sar1b	100	85.859	Amphiprion_percula
ENSPNAG00000001123	-	100	92.424	ENSAPEG00000019680	-	100	92.424	Amphiprion_percula
ENSPNAG00000001123	-	100	86.364	ENSATEG00000012904	sar1b	100	86.364	Anabas_testudineus
ENSPNAG00000001123	-	100	89.899	ENSATEG00000023368	-	100	89.899	Anabas_testudineus
ENSPNAG00000001123	-	100	87.374	ENSACAG00000001470	-	100	87.374	Anolis_carolinensis
ENSPNAG00000001123	-	100	85.859	ENSACLG00000014649	sar1b	100	85.859	Astatotilapia_calliptera
ENSPNAG00000001123	-	100	90.404	ENSACLG00000005011	-	100	90.404	Astatotilapia_calliptera
ENSPNAG00000001123	-	100	97.980	ENSAMXG00000034192	-	91	97.980	Astyanax_mexicanus
ENSPNAG00000001123	-	59	92.308	ENSAMXG00000018108	sar1b	84	92.308	Astyanax_mexicanus
ENSPNAG00000001123	-	100	80.296	ENSCSEG00000015238	sar1b	100	80.296	Cynoglossus_semilaevis
ENSPNAG00000001123	-	100	89.899	ENSCSEG00000016976	-	100	89.899	Cynoglossus_semilaevis
ENSPNAG00000001123	-	100	88.384	ENSCVAG00000022959	sar1b	100	88.384	Cyprinodon_variegatus
ENSPNAG00000001123	-	100	88.384	ENSDARG00000103403	sar1b	100	88.384	Danio_rerio
ENSPNAG00000001123	-	99	70.408	FBgn0038947	Sar1	99	70.408	Drosophila_melanogaster
ENSPNAG00000001123	-	97	82.292	ENSEBUG00000011723	sar1b	97	82.292	Eptatretus_burgeri
ENSPNAG00000001123	-	100	89.394	ENSELUG00000020912	sar1b	100	89.394	Esox_lucius
ENSPNAG00000001123	-	100	87.374	ENSFHEG00000019865	sar1b	100	87.374	Fundulus_heteroclitus
ENSPNAG00000001123	-	100	87.879	ENSGMOG00000008023	sar1b	100	87.879	Gadus_morhua
ENSPNAG00000001123	-	100	86.364	ENSGAFG00000007081	sar1b	100	86.364	Gambusia_affinis
ENSPNAG00000001123	-	100	85.354	ENSGACG00000001474	sar1b	100	85.354	Gasterosteus_aculeatus
ENSPNAG00000001123	-	100	90.404	ENSHBUG00000018397	-	100	90.404	Haplochromis_burtoni
ENSPNAG00000001123	-	100	85.859	ENSHBUG00000000915	sar1b	100	85.859	Haplochromis_burtoni
ENSPNAG00000001123	-	100	86.869	ENSHCOG00000010953	sar1b	100	86.869	Hippocampus_comes
ENSPNAG00000001123	-	100	92.424	ENSIPUG00000010046	sar1b	100	92.424	Ictalurus_punctatus
ENSPNAG00000001123	-	100	87.374	ENSIPUG00000020925	sar1b	100	87.374	Ictalurus_punctatus
ENSPNAG00000001123	-	100	89.394	ENSKMAG00000014875	-	100	89.394	Kryptolebias_marmoratus
ENSPNAG00000001123	-	100	86.364	ENSKMAG00000019693	sar1b	100	86.364	Kryptolebias_marmoratus
ENSPNAG00000001123	-	100	83.838	ENSLBEG00000027550	sar1b	100	83.838	Labrus_bergylta
ENSPNAG00000001123	-	100	90.404	ENSLBEG00000016945	-	100	90.404	Labrus_bergylta
ENSPNAG00000001123	-	100	83.333	ENSLACG00000010795	sar1b	100	83.333	Latimeria_chalumnae
ENSPNAG00000001123	-	100	68.844	ENSLACG00000017029	-	100	68.844	Latimeria_chalumnae
ENSPNAG00000001123	-	100	89.899	ENSLOCG00000005214	-	100	89.899	Lepisosteus_oculatus
ENSPNAG00000001123	-	100	88.889	ENSLOCG00000010197	sar1b	100	88.889	Lepisosteus_oculatus
ENSPNAG00000001123	-	100	84.848	ENSMAMG00000021732	sar1b	100	84.848	Mastacembelus_armatus
ENSPNAG00000001123	-	100	85.859	ENSMZEG00005008942	sar1b	100	85.859	Maylandia_zebra
ENSPNAG00000001123	-	100	90.404	ENSMZEG00005001012	-	100	90.404	Maylandia_zebra
ENSPNAG00000001123	-	90	88.268	ENSMGAG00000005387	-	91	88.268	Meleagris_gallopavo
ENSPNAG00000001123	-	100	90.404	ENSMMOG00000013803	-	100	90.404	Mola_mola
ENSPNAG00000001123	-	100	86.364	ENSMALG00000016635	sar1b	97	85.165	Monopterus_albus
ENSPNAG00000001123	-	100	90.909	ENSNBRG00000014004	-	100	90.909	Neolamprologus_brichardi
ENSPNAG00000001123	-	100	86.364	ENSNBRG00000008013	sar1b	100	86.364	Neolamprologus_brichardi
ENSPNAG00000001123	-	100	86.869	ENSONIG00000017278	sar1b	100	86.869	Oreochromis_niloticus
ENSPNAG00000001123	-	100	85.859	ENSORLG00000000932	sar1b	100	85.859	Oryzias_latipes
ENSPNAG00000001123	-	100	85.859	ENSORLG00020021985	sar1b	100	85.859	Oryzias_latipes_hni
ENSPNAG00000001123	-	100	85.859	ENSORLG00015007044	sar1b	100	85.859	Oryzias_latipes_hsok
ENSPNAG00000001123	-	100	85.859	ENSOMEG00000001052	sar1b	100	85.859	Oryzias_melastigma
ENSPNAG00000001123	-	100	86.364	ENSPKIG00000010688	sar1b	100	86.364	Paramormyrops_kingsleyae
ENSPNAG00000001123	-	100	88.384	ENSPKIG00000017353	-	100	88.384	Paramormyrops_kingsleyae
ENSPNAG00000001123	-	59	90.517	ENSPMGG00000001234	sar1b	91	90.517	Periophthalmus_magnuspinnatus
ENSPNAG00000001123	-	100	82.090	ENSPMAG00000003593	sar1b	100	82.090	Petromyzon_marinus
ENSPNAG00000001123	-	100	85.859	ENSPFOG00000005666	sar1b	100	85.859	Poecilia_formosa
ENSPNAG00000001123	-	61	90.000	ENSPLAG00000001016	-	77	90.000	Poecilia_latipinna
ENSPNAG00000001123	-	100	85.859	ENSPLAG00000012223	sar1b	100	85.859	Poecilia_latipinna
ENSPNAG00000001123	-	100	85.859	ENSPMEG00000016831	sar1b	100	85.859	Poecilia_mexicana
ENSPNAG00000001123	-	60	90.678	ENSPREG00000002020	-	87	90.678	Poecilia_reticulata
ENSPNAG00000001123	-	100	85.859	ENSPREG00000005312	sar1b	90	85.859	Poecilia_reticulata
ENSPNAG00000001123	-	100	85.859	ENSPNYG00000012440	sar1b	100	85.859	Pundamilia_nyererei
ENSPNAG00000001123	-	100	89.899	ENSPNYG00000021357	-	100	89.899	Pundamilia_nyererei
ENSPNAG00000001123	-	100	88.889	ENSSFOG00015020051	sar1b	100	88.889	Scleropages_formosus
ENSPNAG00000001123	-	100	87.374	ENSSFOG00015018128	-	100	87.374	Scleropages_formosus
ENSPNAG00000001123	-	100	88.889	ENSSMAG00000002165	-	100	88.889	Scophthalmus_maximus
ENSPNAG00000001123	-	100	85.354	ENSSMAG00000007106	sar1b	80	85.354	Scophthalmus_maximus
ENSPNAG00000001123	-	100	86.869	ENSSDUG00000020926	sar1b	100	86.869	Seriola_dumerili
ENSPNAG00000001123	-	100	90.909	ENSSDUG00000019629	-	100	90.909	Seriola_dumerili
ENSPNAG00000001123	-	100	86.869	ENSSLDG00000017052	sar1b	100	86.869	Seriola_lalandi_dorsalis
ENSPNAG00000001123	-	100	90.909	ENSSLDG00000024197	-	100	90.909	Seriola_lalandi_dorsalis
ENSPNAG00000001123	-	100	86.364	ENSSPUG00000010247	-	100	86.364	Sphenodon_punctatus
ENSPNAG00000001123	-	100	86.869	ENSSPAG00000017634	sar1b	100	86.869	Stegastes_partitus
ENSPNAG00000001123	-	100	91.414	ENSSPAG00000015626	-	100	91.414	Stegastes_partitus
ENSPNAG00000001123	-	100	82.323	ENSTRUG00000023908	sar1b	100	82.323	Takifugu_rubripes
ENSPNAG00000001123	-	100	84.343	ENSTNIG00000016097	sar1b	100	84.343	Tetraodon_nigroviridis
ENSPNAG00000001123	-	90	87.079	ENSXCOG00000004160	sar1b	87	87.079	Xiphophorus_couchianus
ENSPNAG00000001123	-	64	85.827	ENSXCOG00000006154	-	85	85.827	Xiphophorus_couchianus
ENSPNAG00000001123	-	100	86.364	ENSXMAG00000008294	sar1b	100	86.364	Xiphophorus_maculatus