EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000001142 (Gene tree)
Gene ID: 108432556
Gene Symbol: tnpo3
Alias: zgc:55409
Full Name: transportin 3
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 21523 bases
Position: chrKV575406.1:1932661-1954183
Accession: 108432556
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000002208	Xpo1	PF08389.12	9.7e-28	1	1
ENSPNAP00000002208	IBN_N	PF03810.19	0.00026	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000010831	-	4352	XM_017706472	ENSPNAP00000002208	923 (aa)	XP_017561961	UPI000814AFFD

Gene Model

Click here to download ENSPNAG00000001142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000001142's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000001142	tnpo3	100	86.999	ENSG00000064419	TNPO3	100	87.048	Homo_sapiens
ENSPNAG00000001142	tnpo3	100	94.150	ENSAPOG00000018347	tnpo3	100	94.150	Acanthochromis_polyacanthus
ENSPNAG00000001142	tnpo3	99	83.929	ENSAMEG00000005135	TNPO3	98	83.929	Ailuropoda_melanoleuca
ENSPNAG00000001142	tnpo3	96	91.846	ENSACIG00000005897	tnpo3	99	91.846	Amphilophus_citrinellus
ENSPNAG00000001142	tnpo3	100	94.258	ENSAOCG00000008264	tnpo3	100	94.258	Amphiprion_ocellaris
ENSPNAG00000001142	tnpo3	96	94.224	ENSAPEG00000024300	tnpo3	100	94.224	Amphiprion_percula
ENSPNAG00000001142	tnpo3	100	93.283	ENSATEG00000003197	tnpo3	100	93.283	Anabas_testudineus
ENSPNAG00000001142	tnpo3	72	83.770	ENSAPLG00000005946	TNPO3	91	83.770	Anas_platyrhynchos
ENSPNAG00000001142	tnpo3	82	85.921	ENSACAG00000013470	TNPO3	94	86.340	Anolis_carolinensis
ENSPNAG00000001142	tnpo3	100	86.999	ENSANAG00000037940	TNPO3	100	86.999	Aotus_nancymaae
ENSPNAG00000001142	tnpo3	100	93.391	ENSACLG00000005561	tnpo3	100	93.391	Astatotilapia_calliptera
ENSPNAG00000001142	tnpo3	100	96.533	ENSAMXG00000016236	tnpo3	100	96.533	Astyanax_mexicanus
ENSPNAG00000001142	tnpo3	100	86.674	ENSBTAG00000004992	TNPO3	100	86.698	Bos_taurus
ENSPNAG00000001142	tnpo3	100	87.107	ENSCJAG00000018085	TNPO3	100	87.107	Callithrix_jacchus
ENSPNAG00000001142	tnpo3	100	86.999	ENSCAFG00000001543	TNPO3	100	86.999	Canis_familiaris
ENSPNAG00000001142	tnpo3	100	86.999	ENSCAFG00020022462	TNPO3	99	86.609	Canis_lupus_dingo
ENSPNAG00000001142	tnpo3	100	86.566	ENSCHIG00000011721	TNPO3	100	86.566	Capra_hircus
ENSPNAG00000001142	tnpo3	100	86.891	ENSTSYG00000002989	TNPO3	100	86.891	Carlito_syrichta
ENSPNAG00000001142	tnpo3	72	89.247	ENSCAPG00000005843	TNPO3	91	89.247	Cavia_aperea
ENSPNAG00000001142	tnpo3	100	86.782	ENSCPOG00000039784	TNPO3	100	86.782	Cavia_porcellus
ENSPNAG00000001142	tnpo3	100	87.107	ENSCCAG00000033826	TNPO3	100	87.165	Cebus_capucinus
ENSPNAG00000001142	tnpo3	100	86.999	ENSCATG00000030018	TNPO3	100	87.048	Cercocebus_atys
ENSPNAG00000001142	tnpo3	100	86.084	ENSCLAG00000016298	TNPO3	100	86.084	Chinchilla_lanigera
ENSPNAG00000001142	tnpo3	100	86.891	ENSCSAG00000009966	TNPO3	100	86.891	Chlorocebus_sabaeus
ENSPNAG00000001142	tnpo3	99	62.250	ENSCHOG00000011547	TNPO3	99	62.250	Choloepus_hoffmanni
ENSPNAG00000001142	tnpo3	93	85.531	ENSCPBG00000017497	TNPO3	100	85.531	Chrysemys_picta_bellii
ENSPNAG00000001142	tnpo3	99	49.241	ENSCING00000005042	-	99	49.346	Ciona_intestinalis
ENSPNAG00000001142	tnpo3	99	47.991	ENSCSAVG00000008623	-	96	54.122	Ciona_savignyi
ENSPNAG00000001142	tnpo3	100	86.999	ENSCANG00000033070	TNPO3	100	87.048	Colobus_angolensis_palliatus
ENSPNAG00000001142	tnpo3	100	86.891	ENSCGRG00001015925	Tnpo3	100	86.891	Cricetulus_griseus_chok1gshd
ENSPNAG00000001142	tnpo3	100	86.891	ENSCGRG00000010379	Tnpo3	100	86.891	Cricetulus_griseus_crigri
ENSPNAG00000001142	tnpo3	100	92.199	ENSCSEG00000005952	tnpo3	100	92.199	Cynoglossus_semilaevis
ENSPNAG00000001142	tnpo3	100	91.874	ENSCVAG00000020285	tnpo3	100	91.874	Cyprinodon_variegatus
ENSPNAG00000001142	tnpo3	100	92.958	ENSDARG00000045680	tnpo3	100	92.958	Danio_rerio
ENSPNAG00000001142	tnpo3	100	86.891	ENSDNOG00000002556	TNPO3	100	86.891	Dasypus_novemcinctus
ENSPNAG00000001142	tnpo3	62	85.838	ENSDORG00000002433	Tnpo3	95	85.838	Dipodomys_ordii
ENSPNAG00000001142	tnpo3	99	43.305	FBgn0031456	Tnpo-SR	99	43.305	Drosophila_melanogaster
ENSPNAG00000001142	tnpo3	95	87.033	ENSETEG00000002101	TNPO3	90	87.033	Echinops_telfairi
ENSPNAG00000001142	tnpo3	99	70.109	ENSEBUG00000016931	tnpo3	99	70.109	Eptatretus_burgeri
ENSPNAG00000001142	tnpo3	100	86.891	ENSEASG00005008677	TNPO3	100	86.891	Equus_asinus_asinus
ENSPNAG00000001142	tnpo3	100	86.891	ENSECAG00000012815	TNPO3	100	86.931	Equus_caballus
ENSPNAG00000001142	tnpo3	99	81.489	ENSEEUG00000005178	TNPO3	98	81.489	Erinaceus_europaeus
ENSPNAG00000001142	tnpo3	99	94.668	ENSELUG00000012153	tnpo3	99	94.668	Esox_lucius
ENSPNAG00000001142	tnpo3	100	86.999	ENSFCAG00000018186	TNPO3	100	87.048	Felis_catus
ENSPNAG00000001142	tnpo3	96	81.159	ENSFALG00000010667	TNPO3	100	81.159	Ficedula_albicollis
ENSPNAG00000001142	tnpo3	100	86.595	ENSFDAG00000019578	TNPO3	100	86.595	Fukomys_damarensis
ENSPNAG00000001142	tnpo3	99	91.848	ENSFHEG00000012859	tnpo3	99	91.848	Fundulus_heteroclitus
ENSPNAG00000001142	tnpo3	100	92.849	ENSGMOG00000007324	tnpo3	100	92.849	Gadus_morhua
ENSPNAG00000001142	tnpo3	61	85.336	ENSGALG00000039420	TNPO3	99	85.336	Gallus_gallus
ENSPNAG00000001142	tnpo3	100	92.741	ENSGACG00000000699	tnpo3	100	92.741	Gasterosteus_aculeatus
ENSPNAG00000001142	tnpo3	93	85.648	ENSGAGG00000006777	TNPO3	100	85.648	Gopherus_agassizii
ENSPNAG00000001142	tnpo3	100	86.999	ENSGGOG00000008339	TNPO3	100	87.048	Gorilla_gorilla
ENSPNAG00000001142	tnpo3	100	93.391	ENSHBUG00000008351	tnpo3	100	93.391	Haplochromis_burtoni
ENSPNAG00000001142	tnpo3	100	87.107	ENSHGLG00000004463	TNPO3	100	87.107	Heterocephalus_glaber_female
ENSPNAG00000001142	tnpo3	100	87.107	ENSHGLG00100005509	TNPO3	100	87.107	Heterocephalus_glaber_male
ENSPNAG00000001142	tnpo3	100	90.466	ENSHCOG00000007221	tnpo3	100	90.466	Hippocampus_comes
ENSPNAG00000001142	tnpo3	100	94.366	ENSIPUG00000014979	TNPO3	99	94.366	Ictalurus_punctatus
ENSPNAG00000001142	tnpo3	100	86.891	ENSSTOG00000004885	TNPO3	100	86.931	Ictidomys_tridecemlineatus
ENSPNAG00000001142	tnpo3	100	81.210	ENSJJAG00000013530	Tnpo3	100	81.210	Jaculus_jaculus
ENSPNAG00000001142	tnpo3	100	92.633	ENSKMAG00000010497	tnpo3	100	92.633	Kryptolebias_marmoratus
ENSPNAG00000001142	tnpo3	96	90.600	ENSLBEG00000016595	tnpo3	100	90.600	Labrus_bergylta
ENSPNAG00000001142	tnpo3	96	88.448	ENSLBEG00000011988	-	99	88.448	Labrus_bergylta
ENSPNAG00000001142	tnpo3	90	88.396	ENSLACG00000002351	TNPO3	99	88.396	Latimeria_chalumnae
ENSPNAG00000001142	tnpo3	100	92.416	ENSLOCG00000015556	tnpo3	100	92.416	Lepisosteus_oculatus
ENSPNAG00000001142	tnpo3	100	86.300	ENSLAFG00000002738	TNPO3	100	86.300	Loxodonta_africana
ENSPNAG00000001142	tnpo3	100	86.999	ENSMFAG00000032385	TNPO3	100	87.048	Macaca_fascicularis
ENSPNAG00000001142	tnpo3	100	86.999	ENSMMUG00000004311	TNPO3	100	87.048	Macaca_mulatta
ENSPNAG00000001142	tnpo3	100	86.999	ENSMNEG00000045277	TNPO3	100	87.048	Macaca_nemestrina
ENSPNAG00000001142	tnpo3	100	86.999	ENSMLEG00000037881	TNPO3	100	87.048	Mandrillus_leucophaeus
ENSPNAG00000001142	tnpo3	100	93.824	ENSMAMG00000021096	tnpo3	100	93.824	Mastacembelus_armatus
ENSPNAG00000001142	tnpo3	100	93.391	ENSMZEG00005015084	tnpo3	100	93.391	Maylandia_zebra
ENSPNAG00000001142	tnpo3	78	81.793	ENSMGAG00000002839	TNPO3	99	81.793	Meleagris_gallopavo
ENSPNAG00000001142	tnpo3	100	86.782	ENSMAUG00000013463	Tnpo3	100	86.782	Mesocricetus_auratus
ENSPNAG00000001142	tnpo3	100	86.999	ENSMICG00000000140	TNPO3	100	86.999	Microcebus_murinus
ENSPNAG00000001142	tnpo3	100	86.891	ENSMOCG00000013264	Tnpo3	100	86.891	Microtus_ochrogaster
ENSPNAG00000001142	tnpo3	100	92.524	ENSMMOG00000005887	tnpo3	100	92.524	Mola_mola
ENSPNAG00000001142	tnpo3	100	87.324	ENSMODG00000014700	TNPO3	100	87.324	Monodelphis_domestica
ENSPNAG00000001142	tnpo3	100	92.091	ENSMALG00000006675	tnpo3	100	92.091	Monopterus_albus
ENSPNAG00000001142	tnpo3	100	86.674	MGP_CAROLIEiJ_G0028176	Tnpo3	100	86.674	Mus_caroli
ENSPNAG00000001142	tnpo3	100	86.674	ENSMUSG00000012535	Tnpo3	100	86.674	Mus_musculus
ENSPNAG00000001142	tnpo3	100	86.566	MGP_PahariEiJ_G0021934	Tnpo3	100	86.566	Mus_pahari
ENSPNAG00000001142	tnpo3	100	86.566	MGP_SPRETEiJ_G0029176	Tnpo3	100	86.566	Mus_spretus
ENSPNAG00000001142	tnpo3	100	86.999	ENSMPUG00000006021	TNPO3	100	86.999	Mustela_putorius_furo
ENSPNAG00000001142	tnpo3	100	78.332	ENSMLUG00000000947	TNPO3	100	78.332	Myotis_lucifugus
ENSPNAG00000001142	tnpo3	100	86.891	ENSNGAG00000008722	Tnpo3	100	86.891	Nannospalax_galili
ENSPNAG00000001142	tnpo3	100	91.766	ENSNBRG00000019001	tnpo3	100	93.348	Neolamprologus_brichardi
ENSPNAG00000001142	tnpo3	100	83.699	ENSNLEG00000012491	TNPO3	100	83.699	Nomascus_leucogenys
ENSPNAG00000001142	tnpo3	92	72.588	ENSMEUG00000002445	TNPO3	91	72.588	Notamacropus_eugenii
ENSPNAG00000001142	tnpo3	91	86.413	ENSOPRG00000006163	TNPO3	90	86.413	Ochotona_princeps
ENSPNAG00000001142	tnpo3	98	86.807	ENSODEG00000012826	TNPO3	100	86.807	Octodon_degus
ENSPNAG00000001142	tnpo3	100	93.608	ENSONIG00000007604	tnpo3	100	93.608	Oreochromis_niloticus
ENSPNAG00000001142	tnpo3	95	83.388	ENSOANG00000011451	TNPO3	100	83.388	Ornithorhynchus_anatinus
ENSPNAG00000001142	tnpo3	99	83.929	ENSOCUG00000010105	TNPO3	99	83.929	Oryctolagus_cuniculus
ENSPNAG00000001142	tnpo3	100	92.091	ENSORLG00000029369	tnpo3	100	92.091	Oryzias_latipes
ENSPNAG00000001142	tnpo3	100	92.091	ENSORLG00020003464	tnpo3	100	92.091	Oryzias_latipes_hni
ENSPNAG00000001142	tnpo3	100	92.199	ENSORLG00015002610	tnpo3	100	92.199	Oryzias_latipes_hsok
ENSPNAG00000001142	tnpo3	100	92.524	ENSOMEG00000021006	tnpo3	100	92.524	Oryzias_melastigma
ENSPNAG00000001142	tnpo3	100	86.891	ENSOGAG00000015340	TNPO3	100	86.891	Otolemur_garnettii
ENSPNAG00000001142	tnpo3	100	86.566	ENSOARG00000004026	TNPO3	100	86.566	Ovis_aries
ENSPNAG00000001142	tnpo3	100	86.999	ENSPPAG00000034975	TNPO3	100	87.048	Pan_paniscus
ENSPNAG00000001142	tnpo3	100	86.999	ENSPPRG00000002050	TNPO3	100	86.999	Panthera_pardus
ENSPNAG00000001142	tnpo3	100	86.999	ENSPTIG00000016167	TNPO3	100	86.999	Panthera_tigris_altaica
ENSPNAG00000001142	tnpo3	100	86.999	ENSPTRG00000019676	TNPO3	100	87.048	Pan_troglodytes
ENSPNAG00000001142	tnpo3	98	86.961	ENSPANG00000022226	TNPO3	99	86.961	Papio_anubis
ENSPNAG00000001142	tnpo3	100	89.166	ENSPKIG00000023234	tnpo3	100	89.166	Paramormyrops_kingsleyae
ENSPNAG00000001142	tnpo3	100	85.853	ENSPKIG00000008628	-	100	85.853	Paramormyrops_kingsleyae
ENSPNAG00000001142	tnpo3	62	85.915	ENSPMGG00000009763	tnpo3	99	85.915	Periophthalmus_magnuspinnatus
ENSPNAG00000001142	tnpo3	100	86.782	ENSPEMG00000000422	Tnpo3	100	86.782	Peromyscus_maniculatus_bairdii
ENSPNAG00000001142	tnpo3	95	72.140	ENSPMAG00000008621	tnpo3	100	72.140	Petromyzon_marinus
ENSPNAG00000001142	tnpo3	100	86.891	ENSPCIG00000011366	TNPO3	100	86.891	Phascolarctos_cinereus
ENSPNAG00000001142	tnpo3	100	91.441	ENSPFOG00000013592	tnpo3	99	91.441	Poecilia_formosa
ENSPNAG00000001142	tnpo3	100	91.441	ENSPLAG00000010188	tnpo3	100	91.441	Poecilia_latipinna
ENSPNAG00000001142	tnpo3	100	91.549	ENSPMEG00000022731	tnpo3	100	91.549	Poecilia_mexicana
ENSPNAG00000001142	tnpo3	100	86.999	ENSPPYG00000017990	TNPO3	100	86.999	Pongo_abelii
ENSPNAG00000001142	tnpo3	99	77.754	ENSPCAG00000010158	TNPO3	98	77.754	Procavia_capensis
ENSPNAG00000001142	tnpo3	87	86.513	ENSPCOG00000023901	TNPO3	96	86.513	Propithecus_coquereli
ENSPNAG00000001142	tnpo3	99	80.987	ENSPVAG00000015757	TNPO3	98	80.987	Pteropus_vampyrus
ENSPNAG00000001142	tnpo3	100	93.391	ENSPNYG00000002349	tnpo3	100	93.391	Pundamilia_nyererei
ENSPNAG00000001142	tnpo3	100	86.782	ENSRNOG00000021758	Tnpo3	100	86.814	Rattus_norvegicus
ENSPNAG00000001142	tnpo3	100	86.891	ENSRBIG00000042549	TNPO3	100	86.931	Rhinopithecus_bieti
ENSPNAG00000001142	tnpo3	100	86.891	ENSRROG00000039264	TNPO3	100	86.891	Rhinopithecus_roxellana
ENSPNAG00000001142	tnpo3	100	70.428	ENSSBOG00000029642	TNPO3	100	70.428	Saimiri_boliviensis_boliviensis
ENSPNAG00000001142	tnpo3	96	87.542	ENSSHAG00000006837	TNPO3	100	87.542	Sarcophilus_harrisii
ENSPNAG00000001142	tnpo3	100	90.033	ENSSFOG00015001474	tnpo3	100	90.033	Scleropages_formosus
ENSPNAG00000001142	tnpo3	100	86.004	ENSSFOG00015004256	tnpo3	100	86.004	Scleropages_formosus
ENSPNAG00000001142	tnpo3	100	93.608	ENSSMAG00000010422	tnpo3	97	93.608	Scophthalmus_maximus
ENSPNAG00000001142	tnpo3	100	93.824	ENSSDUG00000004850	tnpo3	100	93.824	Seriola_dumerili
ENSPNAG00000001142	tnpo3	100	93.824	ENSSLDG00000016927	tnpo3	100	93.824	Seriola_lalandi_dorsalis
ENSPNAG00000001142	tnpo3	95	75.798	ENSSARG00000013893	TNPO3	98	75.798	Sorex_araneus
ENSPNAG00000001142	tnpo3	99	81.107	ENSSPUG00000007457	TNPO3	99	81.148	Sphenodon_punctatus
ENSPNAG00000001142	tnpo3	79	94.766	ENSSPAG00000014209	tnpo3	99	94.766	Stegastes_partitus
ENSPNAG00000001142	tnpo3	100	86.999	ENSSSCG00000016572	TNPO3	100	87.048	Sus_scrofa
ENSPNAG00000001142	tnpo3	100	91.145	ENSTNIG00000003347	tnpo3	100	91.145	Tetraodon_nigroviridis
ENSPNAG00000001142	tnpo3	88	86.084	ENSTBEG00000007220	TNPO3	90	86.084	Tupaia_belangeri
ENSPNAG00000001142	tnpo3	99	74.475	ENSTTRG00000014618	TNPO3	98	74.475	Tursiops_truncatus
ENSPNAG00000001142	tnpo3	100	86.999	ENSUAMG00000021281	TNPO3	100	86.999	Ursus_americanus
ENSPNAG00000001142	tnpo3	100	86.999	ENSUMAG00000006882	TNPO3	100	86.999	Ursus_maritimus
ENSPNAG00000001142	tnpo3	85	73.498	ENSVPAG00000006166	TNPO3	88	73.498	Vicugna_pacos
ENSPNAG00000001142	tnpo3	100	86.999	ENSVVUG00000011004	TNPO3	100	87.009	Vulpes_vulpes
ENSPNAG00000001142	tnpo3	99	77.790	ENSXETG00000015009	tnpo3	99	77.790	Xenopus_tropicalis
ENSPNAG00000001142	tnpo3	100	91.549	ENSXMAG00000013062	tnpo3	100	91.549	Xiphophorus_maculatus