EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000001219 (Gene tree)
Gene ID: 108428176
Gene Symbol: naf1
Alias: fd12g08|si:dkey-22l11.5|wu:fd12g08
Full Name: nuclear assembly factor 1 ribonucleoprotein
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 9904 bases
Position: chrKV575344.1:3386821-3396724
Accession: 108428176
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000002463	Gar1	PF04410.14	9.3e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000010379	-	2351	XM_017698971	ENSPNAP00000002463	608 (aa)	XP_017554460	UPI00081421B8

Gene Model

Click here to download ENSPNAG00000001219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000001219's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000001219	naf1	67	66.176	ENSAMXG00000030034	naf1	90	65.000	Astyanax_mexicanus
ENSPNAG00000001219	naf1	51	45.418	ENSCVAG00000003483	-	80	41.406	Cyprinodon_variegatus
ENSPNAG00000001219	naf1	65	55.779	ENSDARG00000057929	naf1	67	59.710	Danio_rerio
ENSPNAG00000001219	naf1	55	44.409	ENSDORG00000011327	Naf1	71	53.302	Dipodomys_ordii
ENSPNAG00000001219	naf1	55	47.170	ENSFHEG00000015835	-	56	46.212	Fundulus_heteroclitus
ENSPNAG00000001219	naf1	56	49.296	ENSHCOG00000001581	-	66	45.038	Hippocampus_comes
ENSPNAG00000001219	naf1	66	57.463	ENSIPUG00000019009	naf1	77	58.213	Ictalurus_punctatus
ENSPNAG00000001219	naf1	54	41.639	ENSKMAG00000005434	-	56	42.857	Kryptolebias_marmoratus
ENSPNAG00000001219	naf1	54	42.913	ENSMZEG00005005830	-	65	43.233	Maylandia_zebra
ENSPNAG00000001219	naf1	55	48.101	ENSPFOG00000010705	-	52	43.254	Poecilia_formosa
ENSPNAG00000001219	naf1	55	48.523	ENSPLAG00000002200	-	52	43.651	Poecilia_latipinna
ENSPNAG00000001219	naf1	55	47.679	ENSPMEG00000004437	-	51	44.000	Poecilia_mexicana
ENSPNAG00000001219	naf1	54	46.862	ENSPREG00000022551	-	56	43.750	Poecilia_reticulata
ENSPNAG00000001219	naf1	56	48.117	ENSXMAG00000011494	-	55	44.361	Xiphophorus_maculatus