EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000001237 (Gene tree)
Gene ID: 108424079
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 17449 bases
Position: chrKV575306.1:2548540-2565988
Accession: 108424079
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000002509	GTP_EFTU	PF00009.27	4.9e-63	1	1
ENSPNAP00000002509	GTP_EFTU_D2	PF03144.25	2.2e-16	1	1
ENSPNAP00000002509	EFG_IV	PF03764.18	2.1e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000010312	-	4663	XM_017691852	ENSPNAP00000002509	743 (aa)	XP_017547341	UPI0008146B82

Gene Model

Click here to download ENSPNAG00000001237's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000001237's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000001237	gfm1	52	39.610	ENSPNAG00000025157	guf1	61	39.610
ENSPNAG00000001237	gfm1	74	38.255	ENSPNAG00000012086	-	73	38.255
ENSPNAG00000001237	gfm1	73	36.913	ENSPNAG00000010655	eef2l2	71	36.913
ENSPNAG00000001237	gfm1	74	38.667	ENSPNAG00000027010	eef2b	72	38.667
ENSPNAG00000001237	gfm1	96	33.202	ENSPNAG00000018467	gfm2	96	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000001237	gfm1	97	80.556	ENSG00000168827	GFM1	100	93.333	Homo_sapiens
ENSPNAG00000001237	gfm1	93	82.235	ENSAPOG00000016489	gfm1	99	82.235	Acanthochromis_polyacanthus
ENSPNAG00000001237	gfm1	98	80.959	ENSAMEG00000013542	GFM1	100	79.681	Ailuropoda_melanoleuca
ENSPNAG00000001237	gfm1	97	81.630	ENSACIG00000014465	gfm1	94	81.630	Amphilophus_citrinellus
ENSPNAG00000001237	gfm1	100	83.690	ENSAOCG00000006023	gfm1	100	83.690	Amphiprion_ocellaris
ENSPNAG00000001237	gfm1	100	83.556	ENSAPEG00000024499	gfm1	99	84.626	Amphiprion_percula
ENSPNAG00000001237	gfm1	100	86.230	ENSATEG00000013789	gfm1	100	86.230	Anabas_testudineus
ENSPNAG00000001237	gfm1	97	80.552	ENSAPLG00000005022	GFM1	100	80.552	Anas_platyrhynchos
ENSPNAG00000001237	gfm1	97	81.077	ENSACAG00000006829	GFM1	98	81.077	Anolis_carolinensis
ENSPNAG00000001237	gfm1	100	79.228	ENSANAG00000035983	GFM1	100	79.228	Aotus_nancymaae
ENSPNAG00000001237	gfm1	100	84.759	ENSACLG00000016586	gfm1	100	84.759	Astatotilapia_calliptera
ENSPNAG00000001237	gfm1	100	92.732	ENSAMXG00000013435	gfm1	97	92.393	Astyanax_mexicanus
ENSPNAG00000001237	gfm1	97	80.641	ENSBTAG00000027795	GFM1	100	78.353	Bos_taurus
ENSPNAG00000001237	gfm1	98	56.071	WBGene00009246	gfm-1	99	55.780	Caenorhabditis_elegans
ENSPNAG00000001237	gfm1	100	79.228	ENSCJAG00000000363	GFM1	100	79.228	Callithrix_jacchus
ENSPNAG00000001237	gfm1	97	82.173	ENSCAFG00000009006	GFM1	100	81.953	Canis_familiaris
ENSPNAG00000001237	gfm1	97	82.173	ENSCAFG00020005878	GFM1	98	82.173	Canis_lupus_dingo
ENSPNAG00000001237	gfm1	100	78.752	ENSCHIG00000015220	GFM1	100	78.752	Capra_hircus
ENSPNAG00000001237	gfm1	100	79.283	ENSTSYG00000002013	GFM1	100	79.283	Carlito_syrichta
ENSPNAG00000001237	gfm1	98	70.123	ENSCAPG00000005699	GFM1	99	70.123	Cavia_aperea
ENSPNAG00000001237	gfm1	100	78.647	ENSCPOG00000001194	GFM1	100	78.647	Cavia_porcellus
ENSPNAG00000001237	gfm1	100	78.695	ENSCCAG00000025561	GFM1	100	78.695	Cebus_capucinus
ENSPNAG00000001237	gfm1	100	78.562	ENSCATG00000037622	GFM1	100	78.562	Cercocebus_atys
ENSPNAG00000001237	gfm1	100	79.167	ENSCLAG00000002503	GFM1	98	79.167	Chinchilla_lanigera
ENSPNAG00000001237	gfm1	100	78.961	ENSCSAG00000012162	GFM1	100	78.961	Chlorocebus_sabaeus
ENSPNAG00000001237	gfm1	100	70.292	ENSCHOG00000004867	GFM1	100	70.292	Choloepus_hoffmanni
ENSPNAG00000001237	gfm1	97	81.717	ENSCPBG00000018367	GFM1	97	81.717	Chrysemys_picta_bellii
ENSPNAG00000001237	gfm1	96	58.047	ENSCING00000011960	-	95	58.047	Ciona_intestinalis
ENSPNAG00000001237	gfm1	96	59.583	ENSCSAVG00000008514	-	100	58.717	Ciona_savignyi
ENSPNAG00000001237	gfm1	97	80.444	ENSCANG00000031714	GFM1	100	78.695	Colobus_angolensis_palliatus
ENSPNAG00000001237	gfm1	100	79.494	ENSCGRG00001022095	GFM1	100	79.494	Cricetulus_griseus_chok1gshd
ENSPNAG00000001237	gfm1	100	79.494	ENSCGRG00000012043	GFM1	100	79.494	Cricetulus_griseus_crigri
ENSPNAG00000001237	gfm1	98	79.477	ENSCSEG00000017088	gfm1	99	79.477	Cynoglossus_semilaevis
ENSPNAG00000001237	gfm1	100	87.166	ENSCVAG00000004126	gfm1	100	87.166	Cyprinodon_variegatus
ENSPNAG00000001237	gfm1	100	86.174	ENSDARG00000063624	gfm1	100	86.174	Danio_rerio
ENSPNAG00000001237	gfm1	55	80.929	ENSDNOG00000016385	-	100	80.929	Dasypus_novemcinctus
ENSPNAG00000001237	gfm1	100	77.793	ENSDORG00000014165	Gfm1	100	77.793	Dipodomys_ordii
ENSPNAG00000001237	gfm1	95	68.688	FBgn0263133	mEFG1	95	68.688	Drosophila_melanogaster
ENSPNAG00000001237	gfm1	97	74.341	ENSETEG00000019197	GFM1	100	72.090	Echinops_telfairi
ENSPNAG00000001237	gfm1	91	63.650	ENSEBUG00000012794	gfm1	99	63.650	Eptatretus_burgeri
ENSPNAG00000001237	gfm1	97	60.000	ENSEEUG00000000429	GFM1	99	60.000	Erinaceus_europaeus
ENSPNAG00000001237	gfm1	100	84.225	ENSELUG00000014728	gfm1	100	84.225	Esox_lucius
ENSPNAG00000001237	gfm1	97	80.946	ENSFCAG00000013291	GFM1	100	78.912	Felis_catus
ENSPNAG00000001237	gfm1	91	80.741	ENSFALG00000007619	GFM1	100	80.741	Ficedula_albicollis
ENSPNAG00000001237	gfm1	100	78.249	ENSFDAG00000016559	GFM1	100	78.249	Fukomys_damarensis
ENSPNAG00000001237	gfm1	100	86.364	ENSFHEG00000006091	gfm1	100	86.364	Fundulus_heteroclitus
ENSPNAG00000001237	gfm1	97	85.144	ENSGMOG00000010161	gfm1	100	85.144	Gadus_morhua
ENSPNAG00000001237	gfm1	97	81.302	ENSGALG00000009634	GFM1	98	81.302	Gallus_gallus
ENSPNAG00000001237	gfm1	100	86.497	ENSGAFG00000012527	gfm1	100	86.497	Gambusia_affinis
ENSPNAG00000001237	gfm1	99	84.358	ENSGACG00000009864	gfm1	99	84.358	Gasterosteus_aculeatus
ENSPNAG00000001237	gfm1	97	80.833	ENSGGOG00000003085	GFM1	100	78.961	Gorilla_gorilla
ENSPNAG00000001237	gfm1	100	84.759	ENSHBUG00000002120	gfm1	100	84.759	Haplochromis_burtoni
ENSPNAG00000001237	gfm1	97	80.111	ENSHGLG00000016855	GFM1	100	77.454	Heterocephalus_glaber_female
ENSPNAG00000001237	gfm1	97	80.111	ENSHGLG00100013049	GFM1	100	77.454	Heterocephalus_glaber_male
ENSPNAG00000001237	gfm1	100	84.358	ENSHCOG00000007638	gfm1	100	84.358	Hippocampus_comes
ENSPNAG00000001237	gfm1	100	91.043	ENSIPUG00000005873	gfm1	100	91.043	Ictalurus_punctatus
ENSPNAG00000001237	gfm1	100	78.629	ENSSTOG00000010150	GFM1	100	78.629	Ictidomys_tridecemlineatus
ENSPNAG00000001237	gfm1	100	78.695	ENSJJAG00000016447	Gfm1	100	78.695	Jaculus_jaculus
ENSPNAG00000001237	gfm1	100	82.888	ENSKMAG00000020768	gfm1	100	82.888	Kryptolebias_marmoratus
ENSPNAG00000001237	gfm1	94	86.876	ENSLBEG00000021315	gfm1	100	86.876	Labrus_bergylta
ENSPNAG00000001237	gfm1	100	81.183	ENSLACG00000012295	GFM1	100	81.183	Latimeria_chalumnae
ENSPNAG00000001237	gfm1	97	80.605	ENSLOCG00000003778	gfm1	99	80.605	Lepisosteus_oculatus
ENSPNAG00000001237	gfm1	99	77.763	ENSLAFG00000010945	GFM1	99	78.889	Loxodonta_africana
ENSPNAG00000001237	gfm1	100	78.961	ENSMFAG00000035731	GFM1	100	78.961	Macaca_fascicularis
ENSPNAG00000001237	gfm1	100	78.961	ENSMMUG00000004961	GFM1	100	78.961	Macaca_mulatta
ENSPNAG00000001237	gfm1	100	78.562	ENSMNEG00000033245	GFM1	100	78.562	Macaca_nemestrina
ENSPNAG00000001237	gfm1	97	78.641	ENSMLEG00000030908	GFM1	99	78.378	Mandrillus_leucophaeus
ENSPNAG00000001237	gfm1	100	84.492	ENSMAMG00000011760	gfm1	100	84.492	Mastacembelus_armatus
ENSPNAG00000001237	gfm1	100	84.893	ENSMZEG00005016639	gfm1	100	84.893	Maylandia_zebra
ENSPNAG00000001237	gfm1	97	81.440	ENSMGAG00000010641	GFM1	97	81.440	Meleagris_gallopavo
ENSPNAG00000001237	gfm1	100	79.627	ENSMAUG00000000611	Gfm1	100	79.627	Mesocricetus_auratus
ENSPNAG00000001237	gfm1	97	81.528	ENSMICG00000049086	GFM1	100	79.178	Microcebus_murinus
ENSPNAG00000001237	gfm1	100	79.627	ENSMOCG00000000465	Gfm1	100	79.627	Microtus_ochrogaster
ENSPNAG00000001237	gfm1	98	85.931	ENSMMOG00000012538	gfm1	98	85.931	Mola_mola
ENSPNAG00000001237	gfm1	100	78.466	ENSMODG00000015673	GFM1	100	78.466	Monodelphis_domestica
ENSPNAG00000001237	gfm1	97	85.774	ENSMALG00000012508	gfm1	95	85.774	Monopterus_albus
ENSPNAG00000001237	gfm1	100	78.695	MGP_CAROLIEiJ_G0025052	Gfm1	100	78.695	Mus_caroli
ENSPNAG00000001237	gfm1	100	78.429	ENSMUSG00000027774	Gfm1	100	78.429	Mus_musculus
ENSPNAG00000001237	gfm1	100	78.695	MGP_PahariEiJ_G0026495	Gfm1	100	78.695	Mus_pahari
ENSPNAG00000001237	gfm1	100	78.429	MGP_SPRETEiJ_G0025994	Gfm1	100	78.429	Mus_spretus
ENSPNAG00000001237	gfm1	100	79.443	ENSMPUG00000002859	GFM1	100	79.443	Mustela_putorius_furo
ENSPNAG00000001237	gfm1	100	78.780	ENSMLUG00000000452	GFM1	100	78.780	Myotis_lucifugus
ENSPNAG00000001237	gfm1	100	79.067	ENSNGAG00000012375	Gfm1	100	79.067	Nannospalax_galili
ENSPNAG00000001237	gfm1	97	86.464	ENSNBRG00000004631	gfm1	99	86.464	Neolamprologus_brichardi
ENSPNAG00000001237	gfm1	97	80.833	ENSNLEG00000004176	GFM1	100	78.828	Nomascus_leucogenys
ENSPNAG00000001237	gfm1	92	71.324	ENSMEUG00000007784	GFM1	99	71.324	Notamacropus_eugenii
ENSPNAG00000001237	gfm1	100	79.167	ENSOPRG00000009860	GFM1	100	79.167	Ochotona_princeps
ENSPNAG00000001237	gfm1	97	81.641	ENSODEG00000004316	GFM1	100	78.836	Octodon_degus
ENSPNAG00000001237	gfm1	100	84.893	ENSONIG00000003772	gfm1	100	84.893	Oreochromis_niloticus
ENSPNAG00000001237	gfm1	97	81.667	ENSOCUG00000013561	GFM1	100	79.443	Oryctolagus_cuniculus
ENSPNAG00000001237	gfm1	95	87.147	ENSORLG00000006487	gfm1	100	87.147	Oryzias_latipes
ENSPNAG00000001237	gfm1	100	84.759	ENSORLG00020003362	gfm1	100	84.759	Oryzias_latipes_hni
ENSPNAG00000001237	gfm1	100	84.759	ENSORLG00015005829	gfm1	100	84.759	Oryzias_latipes_hsok
ENSPNAG00000001237	gfm1	100	84.358	ENSOMEG00000012894	gfm1	100	84.358	Oryzias_melastigma
ENSPNAG00000001237	gfm1	100	78.382	ENSOGAG00000008298	GFM1	100	78.382	Otolemur_garnettii
ENSPNAG00000001237	gfm1	97	80.028	ENSOARG00000002409	GFM1	99	80.028	Ovis_aries
ENSPNAG00000001237	gfm1	97	80.833	ENSPPAG00000033881	GFM1	100	78.961	Pan_paniscus
ENSPNAG00000001237	gfm1	97	81.085	ENSPPRG00000009281	GFM1	100	79.045	Panthera_pardus
ENSPNAG00000001237	gfm1	97	80.946	ENSPTIG00000012416	GFM1	100	78.912	Panthera_tigris_altaica
ENSPNAG00000001237	gfm1	97	80.833	ENSPTRG00000015570	GFM1	100	78.961	Pan_troglodytes
ENSPNAG00000001237	gfm1	100	78.695	ENSPANG00000016512	GFM1	100	78.695	Papio_anubis
ENSPNAG00000001237	gfm1	100	83.957	ENSPKIG00000004876	gfm1	100	83.957	Paramormyrops_kingsleyae
ENSPNAG00000001237	gfm1	100	80.080	ENSPSIG00000012567	GFM1	99	80.080	Pelodiscus_sinensis
ENSPNAG00000001237	gfm1	97	83.586	ENSPMGG00000014068	gfm1	100	83.586	Periophthalmus_magnuspinnatus
ENSPNAG00000001237	gfm1	100	79.095	ENSPEMG00000008942	Gfm1	100	79.095	Peromyscus_maniculatus_bairdii
ENSPNAG00000001237	gfm1	85	76.935	ENSPCIG00000020195	GFM1	96	78.317	Phascolarctos_cinereus
ENSPNAG00000001237	gfm1	100	86.765	ENSPFOG00000011022	gfm1	100	86.765	Poecilia_formosa
ENSPNAG00000001237	gfm1	99	87.110	ENSPLAG00000019585	gfm1	100	85.815	Poecilia_latipinna
ENSPNAG00000001237	gfm1	100	86.898	ENSPMEG00000012376	gfm1	100	86.898	Poecilia_mexicana
ENSPNAG00000001237	gfm1	100	86.230	ENSPREG00000001332	gfm1	95	86.230	Poecilia_reticulata
ENSPNAG00000001237	gfm1	97	80.833	ENSPPYG00000014244	GFM1	100	78.961	Pongo_abelii
ENSPNAG00000001237	gfm1	94	80.370	ENSPCAG00000008934	GFM1	100	80.370	Procavia_capensis
ENSPNAG00000001237	gfm1	99	79.702	ENSPCOG00000022259	GFM1	100	79.045	Propithecus_coquereli
ENSPNAG00000001237	gfm1	97	80.389	ENSPVAG00000013605	GFM1	100	78.117	Pteropus_vampyrus
ENSPNAG00000001237	gfm1	100	84.492	ENSPNYG00000006037	gfm1	98	86.584	Pundamilia_nyererei
ENSPNAG00000001237	gfm1	100	78.961	ENSRNOG00000012873	Gfm1	100	78.961	Rattus_norvegicus
ENSPNAG00000001237	gfm1	97	80.444	ENSRBIG00000031363	GFM1	100	78.695	Rhinopithecus_bieti
ENSPNAG00000001237	gfm1	97	80.583	ENSRROG00000031081	GFM1	100	78.828	Rhinopithecus_roxellana
ENSPNAG00000001237	gfm1	94	56.534	YLR069C	-	91	56.534	Saccharomyces_cerevisiae
ENSPNAG00000001237	gfm1	100	79.095	ENSSBOG00000023252	GFM1	100	79.095	Saimiri_boliviensis_boliviensis
ENSPNAG00000001237	gfm1	97	80.360	ENSSHAG00000017772	GFM1	97	80.249	Sarcophilus_harrisii
ENSPNAG00000001237	gfm1	100	84.112	ENSSFOG00015003117	gfm1	99	85.615	Scleropages_formosus
ENSPNAG00000001237	gfm1	100	83.690	ENSSMAG00000013221	gfm1	100	83.690	Scophthalmus_maximus
ENSPNAG00000001237	gfm1	100	85.160	ENSSDUG00000018665	gfm1	100	85.160	Seriola_dumerili
ENSPNAG00000001237	gfm1	100	85.027	ENSSLDG00000020606	gfm1	100	85.027	Seriola_lalandi_dorsalis
ENSPNAG00000001237	gfm1	99	77.224	ENSSPUG00000018686	GFM1	99	77.224	Sphenodon_punctatus
ENSPNAG00000001237	gfm1	100	85.428	ENSSPAG00000008800	gfm1	100	85.428	Stegastes_partitus
ENSPNAG00000001237	gfm1	97	80.501	ENSSSCG00000025651	GFM1	100	78.117	Sus_scrofa
ENSPNAG00000001237	gfm1	100	83.021	ENSTRUG00000009244	gfm1	100	83.021	Takifugu_rubripes
ENSPNAG00000001237	gfm1	100	84.626	ENSTNIG00000007729	gfm1	100	84.626	Tetraodon_nigroviridis
ENSPNAG00000001237	gfm1	90	73.333	ENSTBEG00000017404	GFM1	89	73.333	Tupaia_belangeri
ENSPNAG00000001237	gfm1	97	80.362	ENSTTRG00000001735	GFM1	100	77.543	Tursiops_truncatus
ENSPNAG00000001237	gfm1	97	81.780	ENSUAMG00000026381	GFM1	100	79.576	Ursus_americanus
ENSPNAG00000001237	gfm1	97	81.780	ENSUMAG00000011268	GFM1	100	79.576	Ursus_maritimus
ENSPNAG00000001237	gfm1	97	77.855	ENSVPAG00000009444	GFM1	100	75.830	Vicugna_pacos
ENSPNAG00000001237	gfm1	97	82.033	ENSVVUG00000020091	GFM1	100	81.805	Vulpes_vulpes
ENSPNAG00000001237	gfm1	100	79.787	ENSXETG00000032551	GFM1	100	79.787	Xenopus_tropicalis
ENSPNAG00000001237	gfm1	52	84.794	ENSXCOG00000012590	gfm1	89	84.794	Xiphophorus_couchianus
ENSPNAG00000001237	gfm1	100	86.631	ENSXMAG00000000261	gfm1	100	86.631	Xiphophorus_maculatus