EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000001239 (Gene tree)
Gene ID: 108434281
Gene Symbol: gatc
Alias: si:rp71-1c23.3
Full Name: glutamyl-tRNA amidotransferase subunit C
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 7009 bases
Position: chrKV575439.1:1311082-1318090
Accession: 108434281
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000024385	Glu-tRNAGln	PF02686.15	3.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000010259	-	2583	XM_017709293	ENSPNAP00000024383	210 (aa)	XP_017564782	UPI000814294C
ENSPNAT00000010253	-	1665	XM_017709292	ENSPNAP00000024385	223 (aa)	XP_017564781	UPI0008143035

Gene Model

Click here to download ENSPNAG00000001239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000001239's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000001239	gatc	56	76.000	ENSAOCG00000014641	gatc	100	76.000	Amphiprion_ocellaris
ENSPNAG00000001239	gatc	63	70.000	ENSAPEG00000023411	gatc	66	74.419	Amphiprion_percula
ENSPNAG00000001239	gatc	75	62.428	ENSACLG00000026251	gatc	69	74.242	Astatotilapia_calliptera
ENSPNAG00000001239	gatc	82	79.781	ENSAMXG00000004252	gatc	80	79.781	Astyanax_mexicanus
ENSPNAG00000001239	gatc	52	37.607	WBGene00013433	Y66D12A.7	67	37.607	Caenorhabditis_elegans
ENSPNAG00000001239	gatc	53	57.500	ENSCPOG00000026436	-	61	67.416	Cavia_porcellus
ENSPNAG00000001239	gatc	70	54.878	ENSCPBG00000011342	-	67	64.286	Chrysemys_picta_bellii
ENSPNAG00000001239	gatc	50	65.766	ENSCSEG00000016618	-	65	65.766	Cynoglossus_semilaevis
ENSPNAG00000001239	gatc	72	60.479	ENSCSEG00000007798	gatc	64	70.866	Cynoglossus_semilaevis
ENSPNAG00000001239	gatc	72	65.269	ENSCVAG00000004364	gatc	68	78.295	Cyprinodon_variegatus
ENSPNAG00000001239	gatc	77	71.512	ENSDARG00000056855	gatc	93	71.512	Danio_rerio
ENSPNAG00000001239	gatc	57	39.259	FBgn0064115	GatC	77	41.176	Drosophila_melanogaster
ENSPNAG00000001239	gatc	54	72.800	ENSELUG00000012608	gatc	75	78.641	Esox_lucius
ENSPNAG00000001239	gatc	52	63.793	ENSFALG00000007564	-	76	63.793	Ficedula_albicollis
ENSPNAG00000001239	gatc	62	72.662	ENSFHEG00000014992	GATC	69	76.744	Fundulus_heteroclitus
ENSPNAG00000001239	gatc	62	65.468	ENSGMOG00000008742	gatc	81	67.939	Gadus_morhua
ENSPNAG00000001239	gatc	54	73.333	ENSGAFG00000012801	gatc	70	78.182	Gambusia_affinis
ENSPNAG00000001239	gatc	58	71.538	ENSGACG00000008973	gatc	67	71.538	Gasterosteus_aculeatus
ENSPNAG00000001239	gatc	69	56.329	ENSGAGG00000016018	-	69	64.286	Gopherus_agassizii
ENSPNAG00000001239	gatc	75	63.006	ENSHBUG00000006827	gatc	69	75.000	Haplochromis_burtoni
ENSPNAG00000001239	gatc	57	74.219	ENSHCOG00000009209	gatc	100	74.219	Hippocampus_comes
ENSPNAG00000001239	gatc	100	64.444	ENSIPUG00000023072	gatc	100	64.444	Ictalurus_punctatus
ENSPNAG00000001239	gatc	58	71.318	ENSKMAG00000016476	gatc	99	71.318	Kryptolebias_marmoratus
ENSPNAG00000001239	gatc	62	66.906	ENSLBEG00000007603	gatc	73	69.697	Labrus_bergylta
ENSPNAG00000001239	gatc	57	65.079	ENSLACG00000018239	-	65	65.079	Latimeria_chalumnae
ENSPNAG00000001239	gatc	77	63.372	ENSLOCG00000004056	gatc	91	62.209	Lepisosteus_oculatus
ENSPNAG00000001239	gatc	59	77.099	ENSMAMG00000015851	gatc	72	77.099	Mastacembelus_armatus
ENSPNAG00000001239	gatc	75	62.428	ENSMZEG00005016072	gatc	69	74.242	Maylandia_zebra
ENSPNAG00000001239	gatc	52	72.650	ENSMMOG00000017695	gatc	88	76.190	Mola_mola
ENSPNAG00000001239	gatc	75	63.006	ENSNBRG00000007810	gatc	69	75.000	Neolamprologus_brichardi
ENSPNAG00000001239	gatc	58	74.046	ENSONIG00000013444	gatc	90	74.046	Oreochromis_niloticus
ENSPNAG00000001239	gatc	54	72.727	ENSORLG00000007156	gatc	100	72.727	Oryzias_latipes
ENSPNAG00000001239	gatc	77	59.429	ENSORLG00020014991	gatc	69	73.643	Oryzias_latipes_hni
ENSPNAG00000001239	gatc	77	59.770	ENSORLG00015003450	gatc	69	73.643	Oryzias_latipes_hsok
ENSPNAG00000001239	gatc	58	72.868	ENSOMEG00000002280	gatc	69	72.868	Oryzias_melastigma
ENSPNAG00000001239	gatc	53	57.258	ENSOARG00000012338	-	96	57.258	Ovis_aries
ENSPNAG00000001239	gatc	85	55.959	ENSPKIG00000024856	gatc	98	55.959	Paramormyrops_kingsleyae
ENSPNAG00000001239	gatc	50	63.717	ENSPSIG00000011112	-	97	63.717	Pelodiscus_sinensis
ENSPNAG00000001239	gatc	57	75.000	ENSPMGG00000018829	gatc	82	75.000	Periophthalmus_magnuspinnatus
ENSPNAG00000001239	gatc	72	66.049	ENSPFOG00000011603	gatc	88	66.061	Poecilia_formosa
ENSPNAG00000001239	gatc	72	65.432	ENSPLAG00000002471	gatc	88	65.455	Poecilia_latipinna
ENSPNAG00000001239	gatc	72	65.432	ENSPMEG00000020958	gatc	88	65.455	Poecilia_mexicana
ENSPNAG00000001239	gatc	50	76.577	ENSPREG00000022256	gatc	75	76.577	Poecilia_reticulata
ENSPNAG00000001239	gatc	54	57.025	ENSPCAG00000013864	-	88	57.025	Procavia_capensis
ENSPNAG00000001239	gatc	62	51.079	ENSPCOG00000015558	-	69	67.416	Propithecus_coquereli
ENSPNAG00000001239	gatc	75	62.428	ENSPNYG00000016015	gatc	69	74.242	Pundamilia_nyererei
ENSPNAG00000001239	gatc	59	71.429	ENSSFOG00015002508	gatc	71	79.464	Scleropages_formosus
ENSPNAG00000001239	gatc	74	65.060	ENSSMAG00000014280	gatc	72	75.969	Scophthalmus_maximus
ENSPNAG00000001239	gatc	71	62.963	ENSSDUG00000012206	gatc	83	63.190	Seriola_dumerili
ENSPNAG00000001239	gatc	69	64.331	ENSSLDG00000025159	gatc	79	64.557	Seriola_lalandi_dorsalis
ENSPNAG00000001239	gatc	69	53.247	ENSSPUG00000015693	-	73	65.347	Sphenodon_punctatus
ENSPNAG00000001239	gatc	71	66.456	ENSSPAG00000011860	gatc	68	77.519	Stegastes_partitus
ENSPNAG00000001239	gatc	59	73.485	ENSTRUG00000021596	gatc	67	73.485	Takifugu_rubripes
ENSPNAG00000001239	gatc	74	61.714	ENSTNIG00000015879	gatc	64	73.485	Tetraodon_nigroviridis
ENSPNAG00000001239	gatc	52	75.862	ENSXCOG00000017087	gatc	85	75.862	Xiphophorus_couchianus
ENSPNAG00000001239	gatc	72	64.815	ENSXMAG00000018267	gatc	70	75.194	Xiphophorus_maculatus