EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000001512 (Gene tree)
Gene ID: 108443107
Gene Symbol: polr1d
Alias: im:7162148|zgc:136449
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 12645 bases
Position: chrKV575810.1:78484-91128
Accession: 108443107
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000004648	RNA_pol_L_2	PF13656.6	6.1e-29	1	1
ENSPNAP00000004648	RNA_pol_L	PF01193.24	7.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000006663	-	877	XM_017723533	ENSPNAP00000004648	119 (aa)	XP_017579022	UPI0008145F95

Gene Model

Click here to download ENSPNAG00000001512's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000001512's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000001512	polr1d	77	32.609	ENSPNAG00000016595	polr2j	79	32.609

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000001512	polr1d	87	67.308	ENSG00000186184	POLR1D	87	68.317	Homo_sapiens
ENSPNAG00000001512	polr1d	92	72.477	ENSAPOG00000021882	polr1d	92	77.320	Acanthochromis_polyacanthus
ENSPNAG00000001512	polr1d	87	68.269	ENSAMEG00000019095	POLR1D	81	69.307	Ailuropoda_melanoleuca
ENSPNAG00000001512	polr1d	100	70.000	ENSACIG00000013328	polr1d	96	72.727	Amphilophus_citrinellus
ENSPNAG00000001512	polr1d	92	75.229	ENSAOCG00000018500	polr1d	96	75.229	Amphiprion_ocellaris
ENSPNAG00000001512	polr1d	92	74.312	ENSAPEG00000009489	polr1d	96	74.312	Amphiprion_percula
ENSPNAG00000001512	polr1d	100	68.067	ENSATEG00000019322	polr1d	96	70.642	Anabas_testudineus
ENSPNAG00000001512	polr1d	91	66.055	ENSACAG00000015753	POLR1D	94	66.055	Anolis_carolinensis
ENSPNAG00000001512	polr1d	87	67.308	ENSANAG00000024486	POLR1D	76	68.317	Aotus_nancymaae
ENSPNAG00000001512	polr1d	100	73.109	ENSACLG00000023805	polr1d	96	76.147	Astatotilapia_calliptera
ENSPNAG00000001512	polr1d	96	85.088	ENSAMXG00000036118	polr1d	95	87.156	Astyanax_mexicanus
ENSPNAG00000001512	polr1d	93	65.179	ENSBTAG00000033252	-	76	69.307	Bos_taurus
ENSPNAG00000001512	polr1d	93	65.179	ENSBTAG00000008642	POLR1D	76	69.307	Bos_taurus
ENSPNAG00000001512	polr1d	70	37.349	WBGene00010230	rpac-19	56	40.000	Caenorhabditis_elegans
ENSPNAG00000001512	polr1d	87	67.308	ENSCJAG00000044669	POLR1D	76	68.317	Callithrix_jacchus
ENSPNAG00000001512	polr1d	87	68.269	ENSCAFG00000006755	POLR1D	76	69.307	Canis_familiaris
ENSPNAG00000001512	polr1d	87	67.308	ENSCHIG00000021910	POLR1D	76	68.317	Capra_hircus
ENSPNAG00000001512	polr1d	85	59.223	ENSTSYG00000034852	-	85	59.223	Carlito_syrichta
ENSPNAG00000001512	polr1d	85	70.297	ENSTSYG00000026817	-	76	70.297	Carlito_syrichta
ENSPNAG00000001512	polr1d	53	52.381	ENSCAPG00000006058	-	64	52.381	Cavia_aperea
ENSPNAG00000001512	polr1d	53	52.381	ENSCPOG00000030450	-	64	52.381	Cavia_porcellus
ENSPNAG00000001512	polr1d	87	66.346	ENSCCAG00000021349	-	76	67.327	Cebus_capucinus
ENSPNAG00000001512	polr1d	85	50.980	ENSCCAG00000020191	-	85	50.980	Cebus_capucinus
ENSPNAG00000001512	polr1d	85	59.406	ENSCATG00000022900	-	75	59.406	Cercocebus_atys
ENSPNAG00000001512	polr1d	87	66.346	ENSCATG00000030710	-	76	67.327	Cercocebus_atys
ENSPNAG00000001512	polr1d	87	66.346	ENSCLAG00000017623	POLR1D	81	67.327	Chinchilla_lanigera
ENSPNAG00000001512	polr1d	82	70.103	ENSCPBG00000004719	POLR1D	95	70.833	Chrysemys_picta_bellii
ENSPNAG00000001512	polr1d	87	66.346	ENSCANG00000028632	-	76	67.327	Colobus_angolensis_palliatus
ENSPNAG00000001512	polr1d	85	66.337	ENSCANG00000037694	-	76	66.337	Colobus_angolensis_palliatus
ENSPNAG00000001512	polr1d	87	68.269	ENSCGRG00001021251	Polr1d	76	69.307	Cricetulus_griseus_chok1gshd
ENSPNAG00000001512	polr1d	87	68.269	ENSCGRG00000011639	Polr1d	76	69.307	Cricetulus_griseus_crigri
ENSPNAG00000001512	polr1d	88	70.476	ENSCSEG00000018268	polr1d	89	71.154	Cynoglossus_semilaevis
ENSPNAG00000001512	polr1d	95	72.566	ENSCVAG00000018527	polr1d	96	74.312	Cyprinodon_variegatus
ENSPNAG00000001512	polr1d	90	72.897	ENSDARG00000037570	polr1d	95	72.897	Danio_rerio
ENSPNAG00000001512	polr1d	87	66.346	ENSDNOG00000043676	-	76	67.327	Dasypus_novemcinctus
ENSPNAG00000001512	polr1d	87	65.385	ENSDNOG00000046247	-	75	66.337	Dasypus_novemcinctus
ENSPNAG00000001512	polr1d	87	68.269	ENSDORG00000029155	Polr1d	76	69.307	Dipodomys_ordii
ENSPNAG00000001512	polr1d	87	43.925	FBgn0086447	l(2)37Cg	80	48.235	Drosophila_melanogaster
ENSPNAG00000001512	polr1d	87	65.385	ENSETEG00000012797	POLR1D	81	66.337	Echinops_telfairi
ENSPNAG00000001512	polr1d	74	64.773	ENSEBUG00000011748	polr1d	61	64.773	Eptatretus_burgeri
ENSPNAG00000001512	polr1d	87	68.269	ENSEASG00005022487	POLR1D	78	69.307	Equus_asinus_asinus
ENSPNAG00000001512	polr1d	87	68.269	ENSEEUG00000013144	POLR1D	81	69.307	Erinaceus_europaeus
ENSPNAG00000001512	polr1d	94	72.321	ENSELUG00000005105	rpac2	94	73.832	Esox_lucius
ENSPNAG00000001512	polr1d	87	68.269	ENSFCAG00000030162	POLR1D	76	69.307	Felis_catus
ENSPNAG00000001512	polr1d	84	74.000	ENSFALG00000011463	POLR1D	99	74.000	Ficedula_albicollis
ENSPNAG00000001512	polr1d	87	65.385	ENSFDAG00000004463	POLR1D	76	66.337	Fukomys_damarensis
ENSPNAG00000001512	polr1d	92	73.394	ENSFHEG00000015410	polr1d	95	73.394	Fundulus_heteroclitus
ENSPNAG00000001512	polr1d	58	62.319	ENSGALG00000007470	POLR1D	68	62.319	Gallus_gallus
ENSPNAG00000001512	polr1d	100	68.908	ENSGAFG00000001693	polr1d	96	71.560	Gambusia_affinis
ENSPNAG00000001512	polr1d	97	70.435	ENSGACG00000018585	polr1d	89	73.333	Gasterosteus_aculeatus
ENSPNAG00000001512	polr1d	92	68.182	ENSGAGG00000008503	POLR1D	96	68.807	Gopherus_agassizii
ENSPNAG00000001512	polr1d	87	67.308	ENSGGOG00000004235	POLR1D	76	68.317	Gorilla_gorilla
ENSPNAG00000001512	polr1d	100	73.109	ENSHBUG00000002111	polr1d	96	76.147	Haplochromis_burtoni
ENSPNAG00000001512	polr1d	87	66.019	ENSHGLG00000003202	POLR1D	75	67.000	Heterocephalus_glaber_female
ENSPNAG00000001512	polr1d	87	66.019	ENSHGLG00100009393	POLR1D	75	67.000	Heterocephalus_glaber_male
ENSPNAG00000001512	polr1d	95	67.257	ENSHCOG00000003258	polr1d	96	68.807	Hippocampus_comes
ENSPNAG00000001512	polr1d	96	79.825	ENSIPUG00000014810	polr1d	95	81.651	Ictalurus_punctatus
ENSPNAG00000001512	polr1d	87	67.308	ENSSTOG00000013877	POLR1D	76	68.317	Ictidomys_tridecemlineatus
ENSPNAG00000001512	polr1d	87	53.846	ENSJJAG00000021667	-	59	54.455	Jaculus_jaculus
ENSPNAG00000001512	polr1d	94	62.500	ENSJJAG00000022671	-	88	64.762	Jaculus_jaculus
ENSPNAG00000001512	polr1d	92	72.727	ENSKMAG00000015256	polr1d	96	73.394	Kryptolebias_marmoratus
ENSPNAG00000001512	polr1d	100	68.908	ENSLBEG00000015919	polr1d	96	71.560	Labrus_bergylta
ENSPNAG00000001512	polr1d	93	63.964	ENSLACG00000006810	POLR1D	89	64.815	Latimeria_chalumnae
ENSPNAG00000001512	polr1d	56	83.582	ENSLOCG00000014976	polr1d	91	83.582	Lepisosteus_oculatus
ENSPNAG00000001512	polr1d	87	67.308	ENSLAFG00000032290	POLR1D	76	68.317	Loxodonta_africana
ENSPNAG00000001512	polr1d	87	66.346	ENSMFAG00000045264	POLR1D	78	67.327	Macaca_fascicularis
ENSPNAG00000001512	polr1d	87	66.346	ENSMMUG00000020386	POLR1D	87	67.327	Macaca_mulatta
ENSPNAG00000001512	polr1d	66	65.385	ENSMMUG00000041570	-	70	65.385	Macaca_mulatta
ENSPNAG00000001512	polr1d	87	66.346	ENSMNEG00000008630	-	76	67.327	Macaca_nemestrina
ENSPNAG00000001512	polr1d	85	54.902	ENSMNEG00000038120	-	85	54.902	Macaca_nemestrina
ENSPNAG00000001512	polr1d	87	66.346	ENSMLEG00000041048	-	76	67.327	Mandrillus_leucophaeus
ENSPNAG00000001512	polr1d	85	60.396	ENSMLEG00000032251	-	75	60.396	Mandrillus_leucophaeus
ENSPNAG00000001512	polr1d	83	75.758	ENSMAMG00000014834	polr1d	92	75.510	Mastacembelus_armatus
ENSPNAG00000001512	polr1d	90	74.766	ENSMZEG00005006638	polr1d	86	78.351	Maylandia_zebra
ENSPNAG00000001512	polr1d	77	76.087	ENSMGAG00000005322	POLR1D	84	76.087	Meleagris_gallopavo
ENSPNAG00000001512	polr1d	87	68.269	ENSMAUG00000001946	Polr1d	76	69.307	Mesocricetus_auratus
ENSPNAG00000001512	polr1d	87	66.346	ENSMICG00000016883	-	76	67.327	Microcebus_murinus
ENSPNAG00000001512	polr1d	86	54.902	ENSMICG00000007349	-	73	55.556	Microcebus_murinus
ENSPNAG00000001512	polr1d	87	68.269	ENSMOCG00000021288	Polr1d	76	69.307	Microtus_ochrogaster
ENSPNAG00000001512	polr1d	100	72.269	ENSMMOG00000009605	polr1d	95	75.926	Mola_mola
ENSPNAG00000001512	polr1d	92	66.055	ENSMODG00000023881	POLR1D	96	66.055	Monodelphis_domestica
ENSPNAG00000001512	polr1d	100	68.067	ENSMALG00000010652	polr1d	96	70.642	Monopterus_albus
ENSPNAG00000001512	polr1d	87	66.346	MGP_CAROLIEiJ_G0028034	Polr1d	76	67.327	Mus_caroli
ENSPNAG00000001512	polr1d	94	63.393	ENSMUSG00000029642	Polr1d	82	64.220	Mus_musculus
ENSPNAG00000001512	polr1d	91	64.815	MGP_PahariEiJ_G0024600	Polr1d	79	65.714	Mus_pahari
ENSPNAG00000001512	polr1d	94	62.500	MGP_SPRETEiJ_G0029032	Polr1d	82	63.303	Mus_spretus
ENSPNAG00000001512	polr1d	87	61.538	ENSMLUG00000004118	-	76	62.376	Myotis_lucifugus
ENSPNAG00000001512	polr1d	87	67.308	ENSMLUG00000027169	-	76	68.317	Myotis_lucifugus
ENSPNAG00000001512	polr1d	87	68.269	ENSNGAG00000006014	Polr1d	87	69.307	Nannospalax_galili
ENSPNAG00000001512	polr1d	100	73.109	ENSNBRG00000020327	polr1d	96	76.147	Neolamprologus_brichardi
ENSPNAG00000001512	polr1d	87	67.308	ENSNLEG00000000358	POLR1D	76	68.317	Nomascus_leucogenys
ENSPNAG00000001512	polr1d	87	53.846	ENSODEG00000014801	-	73	54.455	Octodon_degus
ENSPNAG00000001512	polr1d	87	66.346	ENSODEG00000005294	-	76	67.327	Octodon_degus
ENSPNAG00000001512	polr1d	85	75.248	ENSOANG00000008708	-	94	75.248	Ornithorhynchus_anatinus
ENSPNAG00000001512	polr1d	87	67.308	ENSOCUG00000015706	POLR1D	62	68.317	Oryctolagus_cuniculus
ENSPNAG00000001512	polr1d	100	67.227	ENSORLG00000010257	polr1d	96	69.725	Oryzias_latipes
ENSPNAG00000001512	polr1d	100	67.227	ENSORLG00020000533	polr1d	74	69.725	Oryzias_latipes_hni
ENSPNAG00000001512	polr1d	100	68.067	ENSORLG00015013267	polr1d	72	70.642	Oryzias_latipes_hsok
ENSPNAG00000001512	polr1d	100	67.227	ENSOMEG00000014912	polr1d	73	69.725	Oryzias_melastigma
ENSPNAG00000001512	polr1d	87	67.308	ENSOGAG00000014601	POLR1D	76	68.317	Otolemur_garnettii
ENSPNAG00000001512	polr1d	87	67.308	ENSOARG00000017005	POLR1D	78	68.317	Ovis_aries
ENSPNAG00000001512	polr1d	87	67.308	ENSPPAG00000028138	POLR1D	76	68.317	Pan_paniscus
ENSPNAG00000001512	polr1d	87	68.269	ENSPPRG00000003381	POLR1D	76	69.307	Panthera_pardus
ENSPNAG00000001512	polr1d	87	68.269	ENSPTIG00000018137	POLR1D	76	69.307	Panthera_tigris_altaica
ENSPNAG00000001512	polr1d	87	67.308	ENSPTRG00000005734	POLR1D	76	68.317	Pan_troglodytes
ENSPNAG00000001512	polr1d	85	58.416	ENSPANG00000035051	-	75	58.416	Papio_anubis
ENSPNAG00000001512	polr1d	87	66.346	ENSPANG00000020259	-	76	67.327	Papio_anubis
ENSPNAG00000001512	polr1d	85	76.238	ENSPKIG00000021891	polr1d	94	55.462	Paramormyrops_kingsleyae
ENSPNAG00000001512	polr1d	92	68.182	ENSPSIG00000011822	POLR1D	83	69.159	Pelodiscus_sinensis
ENSPNAG00000001512	polr1d	99	57.627	ENSPMGG00000012998	POLR1D	80	60.550	Periophthalmus_magnuspinnatus
ENSPNAG00000001512	polr1d	95	69.912	ENSPMGG00000010359	polr1d	95	71.560	Periophthalmus_magnuspinnatus
ENSPNAG00000001512	polr1d	87	67.308	ENSPEMG00000006336	-	78	68.317	Peromyscus_maniculatus_bairdii
ENSPNAG00000001512	polr1d	91	59.259	ENSPMAG00000004228	polr1d	91	59.259	Petromyzon_marinus
ENSPNAG00000001512	polr1d	92	66.055	ENSPCIG00000001673	POLR1D	96	66.055	Phascolarctos_cinereus
ENSPNAG00000001512	polr1d	100	69.748	ENSPFOG00000023343	polr1d	100	71.264	Poecilia_formosa
ENSPNAG00000001512	polr1d	100	69.748	ENSPLAG00000009675	polr1d	96	72.477	Poecilia_latipinna
ENSPNAG00000001512	polr1d	100	69.748	ENSPMEG00000004628	polr1d	96	72.477	Poecilia_mexicana
ENSPNAG00000001512	polr1d	100	69.748	ENSPREG00000022032	polr1d	96	72.477	Poecilia_reticulata
ENSPNAG00000001512	polr1d	87	65.385	ENSPCOG00000028175	POLR1D	76	66.337	Propithecus_coquereli
ENSPNAG00000001512	polr1d	100	73.109	ENSPNYG00000000107	polr1d	96	76.147	Pundamilia_nyererei
ENSPNAG00000001512	polr1d	85	65.347	ENSRBIG00000000336	-	76	65.347	Rhinopithecus_bieti
ENSPNAG00000001512	polr1d	87	66.346	ENSRBIG00000036378	-	76	67.327	Rhinopithecus_bieti
ENSPNAG00000001512	polr1d	87	66.346	ENSRROG00000042232	-	76	67.327	Rhinopithecus_roxellana
ENSPNAG00000001512	polr1d	85	66.337	ENSRROG00000026751	-	76	66.337	Rhinopithecus_roxellana
ENSPNAG00000001512	polr1d	75	52.809	YNL113W	RPC19	63	52.222	Saccharomyces_cerevisiae
ENSPNAG00000001512	polr1d	87	67.308	ENSSBOG00000028482	-	76	68.317	Saimiri_boliviensis_boliviensis
ENSPNAG00000001512	polr1d	94	58.929	ENSSBOG00000030146	-	76	59.633	Saimiri_boliviensis_boliviensis
ENSPNAG00000001512	polr1d	90	66.355	ENSSHAG00000001190	POLR1D	82	66.038	Sarcophilus_harrisii
ENSPNAG00000001512	polr1d	88	79.048	ENSSFOG00015011375	polr1d	87	80.808	Scleropages_formosus
ENSPNAG00000001512	polr1d	100	69.748	ENSSMAG00000011861	polr1d	96	72.477	Scophthalmus_maximus
ENSPNAG00000001512	polr1d	100	69.748	ENSSDUG00000011930	polr1d	96	72.477	Seriola_dumerili
ENSPNAG00000001512	polr1d	90	71.028	ENSSLDG00000023871	polr1d	82	74.227	Seriola_lalandi_dorsalis
ENSPNAG00000001512	polr1d	87	68.269	ENSSARG00000007840	POLR1D	76	69.307	Sorex_araneus
ENSPNAG00000001512	polr1d	87	69.231	ENSSPUG00000005786	POLR1D	89	69.231	Sphenodon_punctatus
ENSPNAG00000001512	polr1d	100	71.429	ENSSPAG00000011764	polr1d	96	74.312	Stegastes_partitus
ENSPNAG00000001512	polr1d	87	66.346	ENSSSCG00000009310	POLR1D	76	67.327	Sus_scrofa
ENSPNAG00000001512	polr1d	81	75.000	ENSTGUG00000005450	POLR1D	100	75.000	Taeniopygia_guttata
ENSPNAG00000001512	polr1d	90	71.963	ENSTRUG00000019741	polr1d	94	71.963	Takifugu_rubripes
ENSPNAG00000001512	polr1d	87	66.346	ENSTBEG00000007006	POLR1D	88	63.303	Tupaia_belangeri
ENSPNAG00000001512	polr1d	87	68.269	ENSUAMG00000011413	POLR1D	76	69.307	Ursus_americanus
ENSPNAG00000001512	polr1d	87	68.269	ENSUMAG00000016968	POLR1D	79	69.307	Ursus_maritimus
ENSPNAG00000001512	polr1d	87	68.269	ENSVVUG00000009216	POLR1D	76	69.307	Vulpes_vulpes
ENSPNAG00000001512	polr1d	89	72.642	ENSXCOG00000011731	polr1d	74	76.042	Xiphophorus_couchianus
ENSPNAG00000001512	polr1d	89	73.585	ENSXMAG00000017538	polr1d	74	77.083	Xiphophorus_maculatus