EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000001620 (Gene tree)
Gene ID: 108443663
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 15098 bases
Position: chrKV575861.1:82509-97606
Accession: 108443663
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000025962	Fox-1_C	PF12414.8	3e-33	1	1
ENSPNAP00000025962	RRM_1	PF00076.22	8.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000006305	-	1152	XM_017724446	ENSPNAP00000025962	383 (aa)	XP_017579935	UPI0008142064

Gene Model

Click here to download ENSPNAG00000001620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000001620's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000001620	rbfox1l	64	53.285	ENSPNAG00000000168	rbfox2	53	53.409
ENSPNAG00000001620	rbfox1l	74	59.344	ENSPNAG00000014196	-	59	63.529
ENSPNAG00000001620	rbfox1l	80	61.709	ENSPNAG00000002889	rbfox3a	80	63.810
ENSPNAG00000001620	rbfox1l	60	56.769	ENSPNAG00000018173	rbfox3b	61	57.269
ENSPNAG00000001620	rbfox1l	95	51.134	ENSPNAG00000023109	rbfox1	81	57.716

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000001620	rbfox1l	97	84.267	ENSAPOG00000016304	rbfox1l	98	86.133	Acanthochromis_polyacanthus
ENSPNAG00000001620	rbfox1l	100	78.329	ENSACIG00000006441	rbfox1l	100	78.068	Amphilophus_citrinellus
ENSPNAG00000001620	rbfox1l	88	81.818	ENSAOCG00000020938	rbfox1l	94	81.366	Amphiprion_ocellaris
ENSPNAG00000001620	rbfox1l	100	84.238	ENSAPEG00000008232	rbfox1l	100	86.305	Amphiprion_percula
ENSPNAG00000001620	rbfox1l	100	81.462	ENSATEG00000022649	rbfox1l	100	80.679	Anabas_testudineus
ENSPNAG00000001620	rbfox1l	64	73.705	ENSACAG00000011931	-	88	76.639	Anolis_carolinensis
ENSPNAG00000001620	rbfox1l	100	84.238	ENSACLG00000021394	rbfox1l	100	84.755	Astatotilapia_calliptera
ENSPNAG00000001620	rbfox1l	100	93.473	ENSAMXG00000010470	rbfox1l	100	92.950	Astyanax_mexicanus
ENSPNAG00000001620	rbfox1l	100	55.668	ENSCPBG00000010944	-	100	58.418	Chrysemys_picta_bellii
ENSPNAG00000001620	rbfox1l	100	84.073	ENSCSEG00000018898	rbfox1l	100	85.117	Cynoglossus_semilaevis
ENSPNAG00000001620	rbfox1l	100	83.204	ENSCVAG00000007986	rbfox1l	100	81.137	Cyprinodon_variegatus
ENSPNAG00000001620	rbfox1l	100	90.339	ENSDARG00000021184	rbfox1l	100	89.556	Danio_rerio
ENSPNAG00000001620	rbfox1l	100	80.000	ENSELUG00000015077	rbfox1l	100	79.545	Esox_lucius
ENSPNAG00000001620	rbfox1l	96	79.231	ENSFHEG00000016557	rbfox1l	95	92.683	Fundulus_heteroclitus
ENSPNAG00000001620	rbfox1l	100	80.620	ENSGMOG00000005040	rbfox1l	100	79.587	Gadus_morhua
ENSPNAG00000001620	rbfox1l	92	82.402	ENSGAFG00000013211	rbfox1l	97	80.447	Gambusia_affinis
ENSPNAG00000001620	rbfox1l	100	83.721	ENSGACG00000010757	rbfox1l	100	84.755	Gasterosteus_aculeatus
ENSPNAG00000001620	rbfox1l	69	68.045	ENSGAGG00000012440	-	83	75.934	Gopherus_agassizii
ENSPNAG00000001620	rbfox1l	100	84.238	ENSHBUG00000013406	rbfox1l	100	84.755	Haplochromis_burtoni
ENSPNAG00000001620	rbfox1l	100	85.271	ENSHCOG00000020771	rbfox1l	100	84.755	Hippocampus_comes
ENSPNAG00000001620	rbfox1l	99	87.335	ENSIPUG00000000065	rbfox1l	99	88.732	Ictalurus_punctatus
ENSPNAG00000001620	rbfox1l	100	82.990	ENSKMAG00000005146	rbfox1l	100	84.536	Kryptolebias_marmoratus
ENSPNAG00000001620	rbfox1l	100	83.721	ENSLBEG00000017089	rbfox1l	100	86.563	Labrus_bergylta
ENSPNAG00000001620	rbfox1l	100	82.687	ENSMAMG00000019480	rbfox1l	100	84.755	Mastacembelus_armatus
ENSPNAG00000001620	rbfox1l	100	84.238	ENSMZEG00005016374	rbfox1l	100	84.755	Maylandia_zebra
ENSPNAG00000001620	rbfox1l	100	83.551	ENSMMOG00000016530	rbfox1l	100	83.290	Mola_mola
ENSPNAG00000001620	rbfox1l	100	79.896	ENSMALG00000009384	rbfox1l	100	80.679	Monopterus_albus
ENSPNAG00000001620	rbfox1l	100	83.594	ENSNBRG00000003346	rbfox1l	100	83.594	Neolamprologus_brichardi
ENSPNAG00000001620	rbfox1l	100	85.013	ENSONIG00000012754	rbfox1l	100	85.271	Oreochromis_niloticus
ENSPNAG00000001620	rbfox1l	100	80.879	ENSORLG00000011269	rbfox1l	100	84.496	Oryzias_latipes
ENSPNAG00000001620	rbfox1l	100	81.654	ENSORLG00020000162	rbfox1l	100	85.271	Oryzias_latipes_hni
ENSPNAG00000001620	rbfox1l	100	81.137	ENSORLG00015013464	rbfox1l	100	84.755	Oryzias_latipes_hsok
ENSPNAG00000001620	rbfox1l	100	81.395	ENSOMEG00000010584	rbfox1l	100	85.013	Oryzias_melastigma
ENSPNAG00000001620	rbfox1l	100	88.251	ENSPKIG00000012029	rbfox1l	100	87.467	Paramormyrops_kingsleyae
ENSPNAG00000001620	rbfox1l	100	79.634	ENSPMGG00000012082	rbfox1l	100	81.201	Periophthalmus_magnuspinnatus
ENSPNAG00000001620	rbfox1l	100	83.979	ENSPFOG00000009338	rbfox1l	100	82.171	Poecilia_formosa
ENSPNAG00000001620	rbfox1l	85	75.831	ENSPLAG00000012816	rbfox1l	99	72.810	Poecilia_latipinna
ENSPNAG00000001620	rbfox1l	100	79.845	ENSPMEG00000017597	rbfox1l	100	77.003	Poecilia_mexicana
ENSPNAG00000001620	rbfox1l	100	80.103	ENSPREG00000007940	rbfox1l	100	77.003	Poecilia_reticulata
ENSPNAG00000001620	rbfox1l	100	83.979	ENSPNYG00000002098	rbfox1l	100	84.496	Pundamilia_nyererei
ENSPNAG00000001620	rbfox1l	100	84.595	ENSSFOG00015000675	rbfox1l	100	85.901	Scleropages_formosus
ENSPNAG00000001620	rbfox1l	100	81.395	ENSSMAG00000013090	rbfox1l	100	81.137	Scophthalmus_maximus
ENSPNAG00000001620	rbfox1l	100	79.692	ENSSDUG00000008705	rbfox1l	100	81.748	Seriola_dumerili
ENSPNAG00000001620	rbfox1l	100	81.748	ENSSLDG00000022256	rbfox1l	100	84.576	Seriola_lalandi_dorsalis
ENSPNAG00000001620	rbfox1l	100	83.721	ENSSPAG00000016620	rbfox1l	100	85.788	Stegastes_partitus
ENSPNAG00000001620	rbfox1l	96	80.811	ENSTRUG00000015905	rbfox1l	100	82.432	Takifugu_rubripes
ENSPNAG00000001620	rbfox1l	64	81.203	ENSTNIG00000008088	rbfox1l	97	85.271	Tetraodon_nigroviridis
ENSPNAG00000001620	rbfox1l	100	81.912	ENSXMAG00000023471	rbfox1l	100	81.912	Xiphophorus_maculatus