EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000001663 (Gene tree)
Gene ID: 108437598
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 12070 bases
Position: chrKV575524.1:1190324-1202393
Accession: 108437598
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000026037	ResIII	PF04851.15	2.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000006102	-	5287	XM_017714787	ENSPNAP00000026037	977 (aa)	XP_017570276	UPI00081499B5

Gene Model

Click here to download ENSPNAG00000001663's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000001663's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000001663	smarcad1a	84	63.075	ENSPNAG00000010099	smarcad1b	86	63.196
ENSPNAG00000001663	smarcad1a	52	36.433	ENSPNAG00000029968	hells	66	36.433
ENSPNAG00000001663	smarcad1a	50	31.599	ENSPNAG00000000295	rad54b	58	30.710

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000001663	smarcad1a	100	49.489	ENSG00000163104	SMARCAD1	99	66.667	Homo_sapiens
ENSPNAG00000001663	smarcad1a	100	58.310	ENSAPOG00000011446	smarcad1a	100	58.779	Acanthochromis_polyacanthus
ENSPNAG00000001663	smarcad1a	90	54.645	ENSAMEG00000005844	SMARCAD1	84	55.407	Ailuropoda_melanoleuca
ENSPNAG00000001663	smarcad1a	73	78.383	ENSACIG00000018326	smarcad1a	99	78.383	Amphilophus_citrinellus
ENSPNAG00000001663	smarcad1a	100	58.107	ENSAOCG00000019762	smarcad1a	100	58.575	Amphiprion_ocellaris
ENSPNAG00000001663	smarcad1a	100	58.427	ENSAPEG00000003889	smarcad1a	100	58.857	Amphiprion_percula
ENSPNAG00000001663	smarcad1a	89	62.094	ENSATEG00000015608	smarcad1a	93	62.854	Anabas_testudineus
ENSPNAG00000001663	smarcad1a	90	55.780	ENSAPLG00000004630	SMARCAD1	90	56.004	Anas_platyrhynchos
ENSPNAG00000001663	smarcad1a	90	54.757	ENSACAG00000013554	SMARCAD1	87	54.261	Anolis_carolinensis
ENSPNAG00000001663	smarcad1a	100	49.490	ENSANAG00000020488	SMARCAD1	100	50.377	Aotus_nancymaae
ENSPNAG00000001663	smarcad1a	100	57.854	ENSACLG00000017063	smarcad1a	100	58.142	Astatotilapia_calliptera
ENSPNAG00000001663	smarcad1a	84	62.230	ENSAMXG00000019130	smarcad1b	87	62.710	Astyanax_mexicanus
ENSPNAG00000001663	smarcad1a	72	83.144	ENSAMXG00000015470	smarcad1a	99	83.144	Astyanax_mexicanus
ENSPNAG00000001663	smarcad1a	90	54.417	ENSBTAG00000017061	SMARCAD1	84	55.172	Bos_taurus
ENSPNAG00000001663	smarcad1a	64	41.232	WBGene00010845	M03C11.8	69	39.118	Caenorhabditis_elegans
ENSPNAG00000001663	smarcad1a	100	49.535	ENSCJAG00000006778	SMARCAD1	100	50.426	Callithrix_jacchus
ENSPNAG00000001663	smarcad1a	100	50.279	ENSCAFG00000010026	SMARCAD1	100	50.852	Canis_familiaris
ENSPNAG00000001663	smarcad1a	90	54.814	ENSCAFG00020003994	SMARCAD1	97	55.580	Canis_lupus_dingo
ENSPNAG00000001663	smarcad1a	90	55.407	ENSCHIG00000012905	SMARCAD1	84	55.407	Capra_hircus
ENSPNAG00000001663	smarcad1a	90	54.004	ENSTSYG00000002706	SMARCAD1	84	55.138	Carlito_syrichta
ENSPNAG00000001663	smarcad1a	86	46.828	ENSCAPG00000016744	SMARCAD1	89	48.231	Cavia_aperea
ENSPNAG00000001663	smarcad1a	90	55.531	ENSCPOG00000011398	SMARCAD1	84	55.754	Cavia_porcellus
ENSPNAG00000001663	smarcad1a	100	49.489	ENSCCAG00000022264	SMARCAD1	99	66.667	Cebus_capucinus
ENSPNAG00000001663	smarcad1a	100	50.046	ENSCATG00000035663	SMARCAD1	97	55.642	Cercocebus_atys
ENSPNAG00000001663	smarcad1a	88	54.505	ENSCSAG00000004186	SMARCAD1	100	55.696	Chlorocebus_sabaeus
ENSPNAG00000001663	smarcad1a	93	55.543	ENSCPBG00000013203	SMARCAD1	86	55.483	Chrysemys_picta_bellii
ENSPNAG00000001663	smarcad1a	67	49.396	ENSCING00000001688	-	99	49.396	Ciona_intestinalis
ENSPNAG00000001663	smarcad1a	100	49.954	ENSCANG00000003556	SMARCAD1	99	66.667	Colobus_angolensis_palliatus
ENSPNAG00000001663	smarcad1a	100	49.670	ENSCGRG00001015056	Smarcad1	100	49.859	Cricetulus_griseus_chok1gshd
ENSPNAG00000001663	smarcad1a	100	49.670	ENSCGRG00000014087	Smarcad1	100	49.859	Cricetulus_griseus_crigri
ENSPNAG00000001663	smarcad1a	100	54.902	ENSCSEG00000017903	smarcad1a	100	55.389	Cynoglossus_semilaevis
ENSPNAG00000001663	smarcad1a	100	56.072	ENSCSEG00000014419	-	100	56.102	Cynoglossus_semilaevis
ENSPNAG00000001663	smarcad1a	85	61.740	ENSDARG00000073721	smarcad1b	85	62.143	Danio_rerio
ENSPNAG00000001663	smarcad1a	100	70.553	ENSDARG00000014041	smarcad1a	100	71.586	Danio_rerio
ENSPNAG00000001663	smarcad1a	90	54.098	ENSDNOG00000000806	-	84	55.061	Dasypus_novemcinctus
ENSPNAG00000001663	smarcad1a	100	50.140	ENSDORG00000012331	Smarcad1	100	50.949	Dipodomys_ordii
ENSPNAG00000001663	smarcad1a	85	39.053	FBgn0032157	Etl1	93	39.053	Drosophila_melanogaster
ENSPNAG00000001663	smarcad1a	65	45.412	ENSEBUG00000003969	smarcad1a	97	45.642	Eptatretus_burgeri
ENSPNAG00000001663	smarcad1a	90	54.754	ENSEASG00005012382	SMARCAD1	84	55.630	Equus_asinus_asinus
ENSPNAG00000001663	smarcad1a	90	54.754	ENSECAG00000011562	SMARCAD1	84	55.630	Equus_caballus
ENSPNAG00000001663	smarcad1a	100	61.366	ENSELUG00000018535	smarcad1a	100	61.366	Esox_lucius
ENSPNAG00000001663	smarcad1a	83	61.077	ENSELUG00000019154	smarcad1b	81	61.077	Esox_lucius
ENSPNAG00000001663	smarcad1a	90	54.645	ENSFCAG00000003958	SMARCAD1	99	67.003	Felis_catus
ENSPNAG00000001663	smarcad1a	90	55.679	ENSFALG00000006089	SMARCAD1	84	55.679	Ficedula_albicollis
ENSPNAG00000001663	smarcad1a	100	50.662	ENSFDAG00000017027	SMARCAD1	100	50.899	Fukomys_damarensis
ENSPNAG00000001663	smarcad1a	93	72.065	ENSFHEG00000012778	smarcad1a	94	66.314	Fundulus_heteroclitus
ENSPNAG00000001663	smarcad1a	93	61.379	ENSGMOG00000018995	smarcad1a	100	61.707	Gadus_morhua
ENSPNAG00000001663	smarcad1a	82	55.432	ENSGALG00000037339	SMARCAD1	94	55.432	Gallus_gallus
ENSPNAG00000001663	smarcad1a	99	75.478	ENSGAFG00000013498	smarcad1a	100	56.726	Gambusia_affinis
ENSPNAG00000001663	smarcad1a	91	62.375	ENSGACG00000007327	smarcad1a	98	63.385	Gasterosteus_aculeatus
ENSPNAG00000001663	smarcad1a	90	56.502	ENSGAGG00000008582	SMARCAD1	84	56.502	Gopherus_agassizii
ENSPNAG00000001663	smarcad1a	100	49.540	ENSGGOG00000023001	SMARCAD1	100	50.422	Gorilla_gorilla
ENSPNAG00000001663	smarcad1a	100	57.278	ENSHBUG00000011042	smarcad1a	100	57.940	Haplochromis_burtoni
ENSPNAG00000001663	smarcad1a	90	55.469	ENSHGLG00000005070	SMARCAD1	84	55.692	Heterocephalus_glaber_female
ENSPNAG00000001663	smarcad1a	90	55.469	ENSHGLG00100006812	SMARCAD1	84	55.692	Heterocephalus_glaber_male
ENSPNAG00000001663	smarcad1a	100	51.589	ENSHCOG00000007848	smarcad1a	100	50.772	Hippocampus_comes
ENSPNAG00000001663	smarcad1a	85	62.425	ENSIPUG00000022817	smarcad1b	87	62.425	Ictalurus_punctatus
ENSPNAG00000001663	smarcad1a	98	75.246	ENSIPUG00000000242	smarcad1a	98	77.173	Ictalurus_punctatus
ENSPNAG00000001663	smarcad1a	100	49.489	ENSSTOG00000001227	SMARCAD1	100	50.378	Ictidomys_tridecemlineatus
ENSPNAG00000001663	smarcad1a	100	50.894	ENSJJAG00000022342	Smarcad1	100	51.082	Jaculus_jaculus
ENSPNAG00000001663	smarcad1a	89	73.466	ENSKMAG00000021351	smarcad1a	98	57.703	Kryptolebias_marmoratus
ENSPNAG00000001663	smarcad1a	100	57.915	ENSLBEG00000008088	smarcad1a	99	58.863	Labrus_bergylta
ENSPNAG00000001663	smarcad1a	100	57.242	ENSLOCG00000012909	smarcad1a	100	57.921	Lepisosteus_oculatus
ENSPNAG00000001663	smarcad1a	90	54.292	ENSLAFG00000000040	SMARCAD1	84	54.343	Loxodonta_africana
ENSPNAG00000001663	smarcad1a	100	50.046	ENSMFAG00000042606	SMARCAD1	97	55.642	Macaca_fascicularis
ENSPNAG00000001663	smarcad1a	90	54.486	ENSMMUG00000022242	SMARCAD1	97	55.642	Macaca_mulatta
ENSPNAG00000001663	smarcad1a	100	50.046	ENSMNEG00000038117	SMARCAD1	99	66.667	Macaca_nemestrina
ENSPNAG00000001663	smarcad1a	100	50.046	ENSMLEG00000038333	SMARCAD1	99	66.667	Mandrillus_leucophaeus
ENSPNAG00000001663	smarcad1a	100	59.564	ENSMAMG00000000933	smarcad1a	100	60.038	Mastacembelus_armatus
ENSPNAG00000001663	smarcad1a	100	57.529	ENSMZEG00005005203	smarcad1a	100	58.052	Maylandia_zebra
ENSPNAG00000001663	smarcad1a	95	50.105	ENSMGAG00000005577	SMARCAD1	95	50.105	Meleagris_gallopavo
ENSPNAG00000001663	smarcad1a	100	50.094	ENSMAUG00000008417	Smarcad1	100	50.375	Mesocricetus_auratus
ENSPNAG00000001663	smarcad1a	90	55.568	ENSMICG00000009746	SMARCAD1	84	55.741	Microcebus_murinus
ENSPNAG00000001663	smarcad1a	100	49.906	ENSMOCG00000017142	Smarcad1	100	50.094	Microtus_ochrogaster
ENSPNAG00000001663	smarcad1a	83	64.320	ENSMMOG00000000275	smarcad1a	100	72.485	Mola_mola
ENSPNAG00000001663	smarcad1a	90	56.872	ENSMODG00000019268	SMARCAD1	84	56.872	Monodelphis_domestica
ENSPNAG00000001663	smarcad1a	89	55.293	MGP_CAROLIEiJ_G0028458	-	67	55.293	Mus_caroli
ENSPNAG00000001663	smarcad1a	100	50.563	ENSMUSG00000029920	Smarcad1	100	50.563	Mus_musculus
ENSPNAG00000001663	smarcad1a	100	50.566	MGP_PahariEiJ_G0022198	Smarcad1	100	50.519	Mus_pahari
ENSPNAG00000001663	smarcad1a	90	55.237	MGP_SPRETEiJ_G0029462	Smarcad1	100	50.469	Mus_spretus
ENSPNAG00000001663	smarcad1a	90	54.754	ENSMPUG00000002111	SMARCAD1	84	55.518	Mustela_putorius_furo
ENSPNAG00000001663	smarcad1a	90	55.889	ENSMLUG00000000425	SMARCAD1	100	50.753	Myotis_lucifugus
ENSPNAG00000001663	smarcad1a	100	50.382	ENSNGAG00000000810	Smarcad1	100	50.382	Nannospalax_galili
ENSPNAG00000001663	smarcad1a	69	71.598	ENSNBRG00000012749	smarcad1a	90	66.931	Neolamprologus_brichardi
ENSPNAG00000001663	smarcad1a	100	49.540	ENSNLEG00000014225	SMARCAD1	99	66.667	Nomascus_leucogenys
ENSPNAG00000001663	smarcad1a	93	55.049	ENSODEG00000004334	SMARCAD1	87	55.266	Octodon_degus
ENSPNAG00000001663	smarcad1a	84	58.675	ENSOANG00000013764	SMARCAD1	98	58.314	Ornithorhynchus_anatinus
ENSPNAG00000001663	smarcad1a	100	49.164	ENSOCUG00000017283	SMARCAD1	100	49.953	Oryctolagus_cuniculus
ENSPNAG00000001663	smarcad1a	100	57.790	ENSORLG00000004869	smarcad1a	100	58.074	Oryzias_latipes
ENSPNAG00000001663	smarcad1a	100	57.979	ENSORLG00020020569	smarcad1a	100	58.034	Oryzias_latipes_hni
ENSPNAG00000001663	smarcad1a	100	57.507	ENSORLG00015009045	smarcad1a	100	58.034	Oryzias_latipes_hsok
ENSPNAG00000001663	smarcad1a	99	57.075	ENSOMEG00000023032	smarcad1a	100	57.075	Oryzias_melastigma
ENSPNAG00000001663	smarcad1a	90	54.475	ENSOGAG00000011444	SMARCAD1	84	54.686	Otolemur_garnettii
ENSPNAG00000001663	smarcad1a	100	50.566	ENSOARG00000017851	SMARCAD1	100	50.566	Ovis_aries
ENSPNAG00000001663	smarcad1a	100	49.768	ENSPPAG00000035715	SMARCAD1	100	50.422	Pan_paniscus
ENSPNAG00000001663	smarcad1a	90	54.645	ENSPPRG00000024756	SMARCAD1	99	67.003	Panthera_pardus
ENSPNAG00000001663	smarcad1a	90	54.526	ENSPTIG00000017868	SMARCAD1	84	55.617	Panthera_tigris_altaica
ENSPNAG00000001663	smarcad1a	100	49.540	ENSPTRG00000023126	SMARCAD1	99	66.667	Pan_troglodytes
ENSPNAG00000001663	smarcad1a	100	49.906	ENSPANG00000019757	SMARCAD1	100	49.860	Papio_anubis
ENSPNAG00000001663	smarcad1a	91	55.543	ENSPSIG00000010255	SMARCAD1	85	55.876	Pelodiscus_sinensis
ENSPNAG00000001663	smarcad1a	65	71.362	ENSPMGG00000010735	smarcad1a	97	68.915	Periophthalmus_magnuspinnatus
ENSPNAG00000001663	smarcad1a	100	44.737	ENSPEMG00000001854	Smarcad1	100	45.058	Peromyscus_maniculatus_bairdii
ENSPNAG00000001663	smarcad1a	99	44.135	ENSPMAG00000003516	smarcad1a	99	44.231	Petromyzon_marinus
ENSPNAG00000001663	smarcad1a	83	58.202	ENSPCIG00000008137	SMARCAD1	94	62.589	Phascolarctos_cinereus
ENSPNAG00000001663	smarcad1a	93	73.926	ENSPFOG00000019116	smarcad1a	91	68.151	Poecilia_formosa
ENSPNAG00000001663	smarcad1a	93	73.773	ENSPLAG00000000108	smarcad1a	91	68.016	Poecilia_latipinna
ENSPNAG00000001663	smarcad1a	93	73.926	ENSPMEG00000009155	smarcad1a	91	68.151	Poecilia_mexicana
ENSPNAG00000001663	smarcad1a	96	72.012	ENSPREG00000018185	smarcad1a	96	66.106	Poecilia_reticulata
ENSPNAG00000001663	smarcad1a	100	50.236	ENSPPYG00000014935	SMARCAD1	100	50.425	Pongo_abelii
ENSPNAG00000001663	smarcad1a	60	59.406	ENSPCOG00000020478	SMARCAD1	71	59.406	Propithecus_coquereli
ENSPNAG00000001663	smarcad1a	90	54.267	ENSPVAG00000001760	SMARCAD1	84	55.022	Pteropus_vampyrus
ENSPNAG00000001663	smarcad1a	68	70.692	ENSPNYG00000010087	smarcad1a	92	65.752	Pundamilia_nyererei
ENSPNAG00000001663	smarcad1a	100	50.140	ENSRNOG00000006391	Smarcad1	100	50.140	Rattus_norvegicus
ENSPNAG00000001663	smarcad1a	100	49.586	ENSRBIG00000041989	SMARCAD1	100	50.468	Rhinopithecus_bieti
ENSPNAG00000001663	smarcad1a	100	49.586	ENSRROG00000035309	SMARCAD1	100	50.468	Rhinopithecus_roxellana
ENSPNAG00000001663	smarcad1a	56	42.142	YAL019W	-	51	42.414	Saccharomyces_cerevisiae
ENSPNAG00000001663	smarcad1a	100	50.095	ENSSBOG00000032114	SMARCAD1	99	66.667	Saimiri_boliviensis_boliviensis
ENSPNAG00000001663	smarcad1a	90	56.648	ENSSHAG00000001279	SMARCAD1	100	51.229	Sarcophilus_harrisii
ENSPNAG00000001663	smarcad1a	80	65.190	ENSSFOG00015020909	smarcad1a	100	65.190	Scleropages_formosus
ENSPNAG00000001663	smarcad1a	100	58.727	ENSSFOG00015016814	smarcad1b	100	59.188	Scleropages_formosus
ENSPNAG00000001663	smarcad1a	100	57.674	ENSSMAG00000001326	smarcad1a	100	58.512	Scophthalmus_maximus
ENSPNAG00000001663	smarcad1a	71	72.063	ENSSDUG00000022338	smarcad1a	90	68.824	Seriola_dumerili
ENSPNAG00000001663	smarcad1a	93	71.469	ENSSLDG00000024986	smarcad1a	100	56.636	Seriola_lalandi_dorsalis
ENSPNAG00000001663	smarcad1a	60	66.611	ENSSPUG00000004633	SMARCAD1	99	66.611	Sphenodon_punctatus
ENSPNAG00000001663	smarcad1a	94	73.585	ENSSPAG00000001970	smarcad1a	100	58.698	Stegastes_partitus
ENSPNAG00000001663	smarcad1a	90	54.863	ENSSSCG00000009193	SMARCAD1	100	55.862	Sus_scrofa
ENSPNAG00000001663	smarcad1a	82	59.130	ENSTGUG00000003127	SMARCAD1	99	59.255	Taeniopygia_guttata
ENSPNAG00000001663	smarcad1a	91	63.787	ENSTNIG00000017585	smarcad1a	99	64.143	Tetraodon_nigroviridis
ENSPNAG00000001663	smarcad1a	72	69.048	ENSTBEG00000002789	SMARCAD1	90	69.048	Tupaia_belangeri
ENSPNAG00000001663	smarcad1a	90	55.093	ENSTTRG00000000226	SMARCAD1	87	56.152	Tursiops_truncatus
ENSPNAG00000001663	smarcad1a	90	54.645	ENSUAMG00000022262	SMARCAD1	99	50.101	Ursus_americanus
ENSPNAG00000001663	smarcad1a	90	54.645	ENSUMAG00000004549	SMARCAD1	84	55.407	Ursus_maritimus
ENSPNAG00000001663	smarcad1a	100	50.186	ENSVVUG00000007271	SMARCAD1	100	55.632	Vulpes_vulpes
ENSPNAG00000001663	smarcad1a	95	49.893	ENSXETG00000019214	smarcad1	100	51.171	Xenopus_tropicalis
ENSPNAG00000001663	smarcad1a	98	56.050	ENSXCOG00000005232	smarcad1a	84	70.326	Xiphophorus_couchianus
ENSPNAG00000001663	smarcad1a	100	71.283	ENSXMAG00000015350	smarcad1a	100	56.830	Xiphophorus_maculatus