EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000001676 (Gene tree)
Gene ID: 108435344
Gene Symbol: si:dkey-24l11.2
Alias: -
Full Name: uncharacterized LOC108435344
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 14469 bases
Position: chrKV575465.1:1176522-1190990
Accession: 108435344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000026031	zf-CCCH	PF00642.24	6.7e-08	1	1
ENSPNAP00000026040	zf-CCCH	PF00642.24	8.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000006111	-	1347	-	ENSPNAP00000026031	448 (aa)	-	-
ENSPNAT00000006088	-	4148	XM_017711136	ENSPNAP00000026040	708 (aa)	XP_017566625	UPI00081494D0

Gene Model

Click here to download ENSPNAG00000001676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000001676's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000001676	si:dkey-24l11.2	91	53.659	ENSAPOG00000009246	-	97	53.659	Acanthochromis_polyacanthus
ENSPNAG00000001676	si:dkey-24l11.2	92	53.606	ENSACIG00000000516	-	99	52.941	Amphilophus_citrinellus
ENSPNAG00000001676	si:dkey-24l11.2	97	51.826	ENSAOCG00000003240	-	95	51.826	Amphiprion_ocellaris
ENSPNAG00000001676	si:dkey-24l11.2	94	60.593	ENSATEG00000006680	si:dkey-24l11.2	99	60.593	Anabas_testudineus
ENSPNAG00000001676	si:dkey-24l11.2	92	53.623	ENSACLG00000019918	-	96	53.477	Astatotilapia_calliptera
ENSPNAG00000001676	si:dkey-24l11.2	93	68.997	ENSAMXG00000035914	si:dkey-24l11.2	92	69.369	Astyanax_mexicanus
ENSPNAG00000001676	si:dkey-24l11.2	93	55.947	ENSCSEG00000013278	si:dkey-24l11.2	97	55.947	Cynoglossus_semilaevis
ENSPNAG00000001676	si:dkey-24l11.2	96	60.173	ENSCVAG00000016988	si:dkey-24l11.2	100	60.173	Cyprinodon_variegatus
ENSPNAG00000001676	si:dkey-24l11.2	51	56.356	ENSDARG00000097612	si:dkey-24l11.2	100	52.964	Danio_rerio
ENSPNAG00000001676	si:dkey-24l11.2	95	61.029	ENSELUG00000018751	si:dkey-24l11.2	97	61.144	Esox_lucius
ENSPNAG00000001676	si:dkey-24l11.2	96	59.302	ENSGAFG00000000907	si:dkey-24l11.2	100	59.797	Gambusia_affinis
ENSPNAG00000001676	si:dkey-24l11.2	94	53.191	ENSHBUG00000000459	-	99	53.052	Haplochromis_burtoni
ENSPNAG00000001676	si:dkey-24l11.2	95	57.988	ENSHCOG00000011721	si:dkey-24l11.2	98	57.988	Hippocampus_comes
ENSPNAG00000001676	si:dkey-24l11.2	93	60.180	ENSKMAG00000016828	si:dkey-24l11.2	97	60.180	Kryptolebias_marmoratus
ENSPNAG00000001676	si:dkey-24l11.2	98	59.195	ENSLOCG00000014681	si:dkey-24l11.2	99	59.738	Lepisosteus_oculatus
ENSPNAG00000001676	si:dkey-24l11.2	94	59.440	ENSMAMG00000008500	si:dkey-24l11.2	99	59.882	Mastacembelus_armatus
ENSPNAG00000001676	si:dkey-24l11.2	92	53.623	ENSMZEG00005022357	-	96	53.477	Maylandia_zebra
ENSPNAG00000001676	si:dkey-24l11.2	91	52.225	ENSMMOG00000006855	-	93	53.237	Mola_mola
ENSPNAG00000001676	si:dkey-24l11.2	92	59.187	ENSMALG00000009557	si:dkey-24l11.2	98	59.187	Monopterus_albus
ENSPNAG00000001676	si:dkey-24l11.2	95	47.222	ENSORLG00000007981	-	95	48.037	Oryzias_latipes
ENSPNAG00000001676	si:dkey-24l11.2	91	49.642	ENSORLG00020005134	-	94	50.358	Oryzias_latipes_hni
ENSPNAG00000001676	si:dkey-24l11.2	99	46.341	ENSOMEG00000023279	-	99	49.184	Oryzias_melastigma
ENSPNAG00000001676	si:dkey-24l11.2	92	59.389	ENSPKIG00000001978	si:dkey-24l11.2	96	59.636	Paramormyrops_kingsleyae
ENSPNAG00000001676	si:dkey-24l11.2	91	53.735	ENSPFOG00000003642	si:dkey-24l11.2	100	52.055	Poecilia_formosa
ENSPNAG00000001676	si:dkey-24l11.2	96	52.381	ENSPLAG00000017675	-	94	52.018	Poecilia_latipinna
ENSPNAG00000001676	si:dkey-24l11.2	96	59.768	ENSPMEG00000001177	si:dkey-24l11.2	100	59.768	Poecilia_mexicana
ENSPNAG00000001676	si:dkey-24l11.2	97	58.526	ENSPREG00000008065	si:dkey-24l11.2	95	58.526	Poecilia_reticulata
ENSPNAG00000001676	si:dkey-24l11.2	92	53.606	ENSPNYG00000011245	-	95	53.095	Pundamilia_nyererei
ENSPNAG00000001676	si:dkey-24l11.2	98	58.857	ENSSFOG00015020381	si:dkey-24l11.2	100	58.865	Scleropages_formosus
ENSPNAG00000001676	si:dkey-24l11.2	93	59.820	ENSSMAG00000000823	si:dkey-24l11.2	97	59.165	Scophthalmus_maximus
ENSPNAG00000001676	si:dkey-24l11.2	93	60.593	ENSSDUG00000010620	si:dkey-24l11.2	97	61.004	Seriola_dumerili
ENSPNAG00000001676	si:dkey-24l11.2	93	60.386	ENSSLDG00000000205	si:dkey-24l11.2	97	60.799	Seriola_lalandi_dorsalis
ENSPNAG00000001676	si:dkey-24l11.2	95	59.389	ENSSPAG00000020867	si:dkey-24l11.2	100	59.389	Stegastes_partitus
ENSPNAG00000001676	si:dkey-24l11.2	93	56.886	ENSTRUG00000021832	si:dkey-24l11.2	96	56.886	Takifugu_rubripes
ENSPNAG00000001676	si:dkey-24l11.2	95	53.392	ENSTNIG00000019253	si:dkey-24l11.2	100	53.982	Tetraodon_nigroviridis
ENSPNAG00000001676	si:dkey-24l11.2	91	52.058	ENSXCOG00000020217	-	95	53.140	Xiphophorus_couchianus
ENSPNAG00000001676	si:dkey-24l11.2	93	59.098	ENSXMAG00000003014	si:dkey-24l11.2	97	59.520	Xiphophorus_maculatus