EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000001799 (Gene tree)
Gene ID: 108429238
Gene Symbol: prpf3
Alias: HPRP3|wu:fa11f05
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 9289 bases
Position: chrKV575356.1:2631995-2641283
Accession: 108429238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000026243	PRP3	PF08572.10	1.1e-76	1	1
ENSPNAP00000005240	PRP3	PF08572.10	1.4e-76	1	1
ENSPNAP00000026243	PWI	PF01480.17	3.7e-12	1	1
ENSPNAP00000005240	PWI	PF01480.17	4.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000005641	-	3252	XM_017700859	ENSPNAP00000005240	708 (aa)	XP_017556348	UPI00081461E0
ENSPNAT00000005669	-	1878	-	ENSPNAP00000026243	625 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000001799's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000001799's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000001799	prpf3	99	73.239	ENSG00000117360	PRPF3	100	73.099	Homo_sapiens
ENSPNAG00000001799	prpf3	100	82.163	ENSAPOG00000015584	prpf3	100	82.725	Acanthochromis_polyacanthus
ENSPNAG00000001799	prpf3	99	73.380	ENSAMEG00000001630	PRPF3	100	73.239	Ailuropoda_melanoleuca
ENSPNAG00000001799	prpf3	100	81.793	ENSACIG00000007876	prpf3	100	81.653	Amphilophus_citrinellus
ENSPNAG00000001799	prpf3	100	81.882	ENSAOCG00000011449	prpf3	100	82.725	Amphiprion_ocellaris
ENSPNAG00000001799	prpf3	100	82.889	ENSATEG00000023583	prpf3	100	83.029	Anabas_testudineus
ENSPNAG00000001799	prpf3	99	74.085	ENSAPLG00000002440	PRPF3	100	73.380	Anas_platyrhynchos
ENSPNAG00000001799	prpf3	99	72.753	ENSACAG00000003176	PRPF3	100	73.596	Anolis_carolinensis
ENSPNAG00000001799	prpf3	99	73.239	ENSANAG00000026138	PRPF3	100	73.099	Aotus_nancymaae
ENSPNAG00000001799	prpf3	100	80.508	ENSACLG00000020127	prpf3	100	81.073	Astatotilapia_calliptera
ENSPNAG00000001799	prpf3	100	91.102	ENSAMXG00000007306	prpf3	100	91.102	Astyanax_mexicanus
ENSPNAG00000001799	prpf3	99	73.239	ENSBTAG00000013946	PRPF3	100	73.099	Bos_taurus
ENSPNAG00000001799	prpf3	86	38.929	WBGene00010844	prp-3	95	36.068	Caenorhabditis_elegans
ENSPNAG00000001799	prpf3	99	73.239	ENSCJAG00000009926	PRPF3	100	73.099	Callithrix_jacchus
ENSPNAG00000001799	prpf3	99	73.239	ENSCAFG00000011820	PRPF3	100	73.099	Canis_familiaris
ENSPNAG00000001799	prpf3	81	71.603	ENSCAFG00020019653	PRPF3	100	71.429	Canis_lupus_dingo
ENSPNAG00000001799	prpf3	99	73.239	ENSCHIG00000015434	PRPF3	100	73.099	Capra_hircus
ENSPNAG00000001799	prpf3	99	73.380	ENSTSYG00000001383	PRPF3	100	73.239	Carlito_syrichta
ENSPNAG00000001799	prpf3	92	66.174	ENSCAPG00000017812	PRPF3	95	66.338	Cavia_aperea
ENSPNAG00000001799	prpf3	99	73.239	ENSCPOG00000008068	PRPF3	100	73.099	Cavia_porcellus
ENSPNAG00000001799	prpf3	99	73.239	ENSCCAG00000026380	PRPF3	100	73.099	Cebus_capucinus
ENSPNAG00000001799	prpf3	99	60.699	ENSCATG00000041778	PRPF3	100	60.839	Cercocebus_atys
ENSPNAG00000001799	prpf3	99	73.380	ENSCLAG00000015009	PRPF3	100	73.239	Chinchilla_lanigera
ENSPNAG00000001799	prpf3	76	84.307	ENSCHOG00000011645	PRPF3	76	84.307	Choloepus_hoffmanni
ENSPNAG00000001799	prpf3	99	73.662	ENSCPBG00000008216	PRPF3	100	73.803	Chrysemys_picta_bellii
ENSPNAG00000001799	prpf3	66	58.670	ENSCING00000003312	-	100	58.670	Ciona_intestinalis
ENSPNAG00000001799	prpf3	85	53.663	ENSCSAVG00000008720	-	94	51.820	Ciona_savignyi
ENSPNAG00000001799	prpf3	99	72.676	ENSCANG00000036769	PRPF3	100	72.535	Colobus_angolensis_palliatus
ENSPNAG00000001799	prpf3	99	73.239	ENSCGRG00001019100	Prpf3	100	73.099	Cricetulus_griseus_chok1gshd
ENSPNAG00000001799	prpf3	99	73.239	ENSCGRG00000007322	Prpf3	100	73.099	Cricetulus_griseus_crigri
ENSPNAG00000001799	prpf3	100	81.776	ENSCSEG00000002532	prpf3	100	81.776	Cynoglossus_semilaevis
ENSPNAG00000001799	prpf3	100	79.663	ENSCVAG00000009318	prpf3	100	80.224	Cyprinodon_variegatus
ENSPNAG00000001799	prpf3	100	84.746	ENSDARG00000086425	prpf3	100	88.571	Danio_rerio
ENSPNAG00000001799	prpf3	99	75.039	ENSDNOG00000005904	PRPF3	100	75.039	Dasypus_novemcinctus
ENSPNAG00000001799	prpf3	93	73.071	ENSDORG00000008664	Prpf3	100	72.920	Dipodomys_ordii
ENSPNAG00000001799	prpf3	92	50.739	FBgn0036915	Prp3	99	53.165	Drosophila_melanogaster
ENSPNAG00000001799	prpf3	99	73.380	ENSETEG00000019124	PRPF3	100	73.239	Echinops_telfairi
ENSPNAG00000001799	prpf3	100	62.078	ENSEBUG00000011680	prpf3	100	61.528	Eptatretus_burgeri
ENSPNAG00000001799	prpf3	99	73.099	ENSEASG00005001566	PRPF3	100	72.958	Equus_asinus_asinus
ENSPNAG00000001799	prpf3	99	73.239	ENSECAG00000019840	PRPF3	100	73.099	Equus_caballus
ENSPNAG00000001799	prpf3	82	75.283	ENSEEUG00000007338	PRPF3	85	75.283	Erinaceus_europaeus
ENSPNAG00000001799	prpf3	100	74.402	ENSELUG00000013624	prpf3	100	74.402	Esox_lucius
ENSPNAG00000001799	prpf3	99	73.239	ENSFCAG00000013940	PRPF3	100	73.099	Felis_catus
ENSPNAG00000001799	prpf3	99	73.521	ENSFDAG00000010365	PRPF3	100	73.380	Fukomys_damarensis
ENSPNAG00000001799	prpf3	100	78.955	ENSFHEG00000021746	prpf3	100	79.520	Fundulus_heteroclitus
ENSPNAG00000001799	prpf3	100	80.141	ENSGMOG00000008535	prpf3	100	80.141	Gadus_morhua
ENSPNAG00000001799	prpf3	99	74.225	ENSGALG00000028205	PRPF3	100	73.521	Gallus_gallus
ENSPNAG00000001799	prpf3	100	79.243	ENSGAFG00000012671	prpf3	100	79.804	Gambusia_affinis
ENSPNAG00000001799	prpf3	100	80.899	ENSGACG00000011792	prpf3	100	81.320	Gasterosteus_aculeatus
ENSPNAG00000001799	prpf3	99	73.662	ENSGAGG00000013765	PRPF3	100	76.007	Gopherus_agassizii
ENSPNAG00000001799	prpf3	86	80.178	ENSGGOG00000013174	PRPF3	100	80.178	Gorilla_gorilla
ENSPNAG00000001799	prpf3	100	80.650	ENSHBUG00000003493	prpf3	100	81.215	Haplochromis_burtoni
ENSPNAG00000001799	prpf3	99	55.178	ENSHGLG00000016033	-	100	55.332	Heterocephalus_glaber_female
ENSPNAG00000001799	prpf3	99	73.380	ENSHGLG00000016569	PRPF3	100	73.239	Heterocephalus_glaber_female
ENSPNAG00000001799	prpf3	99	54.884	ENSHGLG00100008951	-	100	54.884	Heterocephalus_glaber_male
ENSPNAG00000001799	prpf3	99	73.380	ENSHGLG00100007590	PRPF3	100	73.239	Heterocephalus_glaber_male
ENSPNAG00000001799	prpf3	100	83.696	ENSHCOG00000014058	prpf3	100	76.117	Hippocampus_comes
ENSPNAG00000001799	prpf3	100	87.147	ENSIPUG00000000902	PRPF3	100	87.429	Ictalurus_punctatus
ENSPNAG00000001799	prpf3	99	73.239	ENSSTOG00000001889	PRPF3	100	73.099	Ictidomys_tridecemlineatus
ENSPNAG00000001799	prpf3	100	83.438	ENSKMAG00000001390	prpf3	100	83.438	Kryptolebias_marmoratus
ENSPNAG00000001799	prpf3	100	84.897	ENSLBEG00000026310	prpf3	100	85.215	Labrus_bergylta
ENSPNAG00000001799	prpf3	93	69.940	ENSLACG00000010541	PRPF3	100	69.940	Latimeria_chalumnae
ENSPNAG00000001799	prpf3	99	73.239	ENSLAFG00000004713	PRPF3	100	73.099	Loxodonta_africana
ENSPNAG00000001799	prpf3	99	73.239	ENSMFAG00000039791	PRPF3	100	73.099	Macaca_fascicularis
ENSPNAG00000001799	prpf3	90	72.642	ENSMMUG00000016301	PRPF3	97	72.484	Macaca_mulatta
ENSPNAG00000001799	prpf3	99	73.239	ENSMNEG00000038161	PRPF3	100	73.099	Macaca_nemestrina
ENSPNAG00000001799	prpf3	98	49.574	ENSMLEG00000041065	-	97	49.432	Mandrillus_leucophaeus
ENSPNAG00000001799	prpf3	86	80.178	ENSMLEG00000040609	PRPF3	100	80.178	Mandrillus_leucophaeus
ENSPNAG00000001799	prpf3	100	84.424	ENSMAMG00000014968	prpf3	100	84.424	Mastacembelus_armatus
ENSPNAG00000001799	prpf3	100	84.640	ENSMZEG00005015970	prpf3	100	84.640	Maylandia_zebra
ENSPNAG00000001799	prpf3	99	74.225	ENSMGAG00000000707	PRPF3	100	73.521	Meleagris_gallopavo
ENSPNAG00000001799	prpf3	99	73.239	ENSMAUG00000017112	Prpf3	100	73.099	Mesocricetus_auratus
ENSPNAG00000001799	prpf3	99	73.099	ENSMICG00000015386	PRPF3	100	75.482	Microcebus_murinus
ENSPNAG00000001799	prpf3	99	73.099	ENSMOCG00000000242	Prpf3	100	72.958	Microtus_ochrogaster
ENSPNAG00000001799	prpf3	100	75.762	ENSMMOG00000016131	prpf3	100	76.316	Mola_mola
ENSPNAG00000001799	prpf3	99	73.380	ENSMODG00000018774	PRPF3	100	73.239	Monodelphis_domestica
ENSPNAG00000001799	prpf3	100	79.775	ENSMALG00000007257	prpf3	100	79.972	Monopterus_albus
ENSPNAG00000001799	prpf3	99	73.239	MGP_CAROLIEiJ_G0025354	Prpf3	100	73.099	Mus_caroli
ENSPNAG00000001799	prpf3	99	73.239	ENSMUSG00000015748	Prpf3	100	73.099	Mus_musculus
ENSPNAG00000001799	prpf3	99	72.817	MGP_PahariEiJ_G0026798	Prpf3	100	72.676	Mus_pahari
ENSPNAG00000001799	prpf3	99	73.239	MGP_SPRETEiJ_G0026298	Prpf3	100	73.099	Mus_spretus
ENSPNAG00000001799	prpf3	99	71.690	ENSMPUG00000005080	PRPF3	100	71.549	Mustela_putorius_furo
ENSPNAG00000001799	prpf3	99	73.418	ENSMLUG00000004646	-	100	73.277	Myotis_lucifugus
ENSPNAG00000001799	prpf3	99	73.239	ENSNGAG00000000910	Prpf3	100	73.099	Nannospalax_galili
ENSPNAG00000001799	prpf3	100	81.232	ENSNBRG00000003462	prpf3	100	81.793	Neolamprologus_brichardi
ENSPNAG00000001799	prpf3	90	72.642	ENSNLEG00000009841	PRPF3	99	72.484	Nomascus_leucogenys
ENSPNAG00000001799	prpf3	83	66.272	ENSMEUG00000008733	PRPF3	89	66.272	Notamacropus_eugenii
ENSPNAG00000001799	prpf3	99	72.676	ENSOPRG00000010139	PRPF3	100	72.535	Ochotona_princeps
ENSPNAG00000001799	prpf3	99	73.380	ENSODEG00000011363	-	100	73.239	Octodon_degus
ENSPNAG00000001799	prpf3	99	55.509	ENSODEG00000014412	-	100	55.370	Octodon_degus
ENSPNAG00000001799	prpf3	100	81.461	ENSONIG00000006394	prpf3	100	82.022	Oreochromis_niloticus
ENSPNAG00000001799	prpf3	99	55.245	ENSOANG00000015441	PRPF3	100	55.245	Ornithorhynchus_anatinus
ENSPNAG00000001799	prpf3	99	73.239	ENSOCUG00000011760	PRPF3	100	73.099	Oryctolagus_cuniculus
ENSPNAG00000001799	prpf3	100	80.056	ENSORLG00000010330	prpf3	100	80.056	Oryzias_latipes
ENSPNAG00000001799	prpf3	100	80.056	ENSORLG00020009054	prpf3	100	80.056	Oryzias_latipes_hni
ENSPNAG00000001799	prpf3	100	79.916	ENSORLG00015015016	prpf3	100	79.916	Oryzias_latipes_hsok
ENSPNAG00000001799	prpf3	100	82.862	ENSOMEG00000000940	prpf3	100	83.333	Oryzias_melastigma
ENSPNAG00000001799	prpf3	99	69.198	ENSOGAG00000005352	PRPF3	100	69.058	Otolemur_garnettii
ENSPNAG00000001799	prpf3	99	73.239	ENSOARG00000020798	PRPF3	100	73.099	Ovis_aries
ENSPNAG00000001799	prpf3	98	56.366	ENSPPAG00000043769	-	99	56.366	Pan_paniscus
ENSPNAG00000001799	prpf3	99	73.099	ENSPPAG00000030983	PRPF3	100	72.958	Pan_paniscus
ENSPNAG00000001799	prpf3	99	73.239	ENSPPRG00000000731	PRPF3	100	73.099	Panthera_pardus
ENSPNAG00000001799	prpf3	99	73.239	ENSPTIG00000005516	PRPF3	100	73.099	Panthera_tigris_altaica
ENSPNAG00000001799	prpf3	99	73.239	ENSPTRG00000001254	PRPF3	100	73.099	Pan_troglodytes
ENSPNAG00000001799	prpf3	98	55.508	ENSPTRG00000047819	-	99	55.508	Pan_troglodytes
ENSPNAG00000001799	prpf3	99	73.099	ENSPANG00000000499	PRPF3	100	72.958	Papio_anubis
ENSPNAG00000001799	prpf3	100	86.943	ENSPKIG00000010501	prpf3	100	86.943	Paramormyrops_kingsleyae
ENSPNAG00000001799	prpf3	99	73.907	ENSPSIG00000014877	PRPF3	100	73.766	Pelodiscus_sinensis
ENSPNAG00000001799	prpf3	100	77.900	ENSPMGG00000007776	prpf3	100	78.056	Periophthalmus_magnuspinnatus
ENSPNAG00000001799	prpf3	99	73.239	ENSPEMG00000011672	Prpf3	100	73.099	Peromyscus_maniculatus_bairdii
ENSPNAG00000001799	prpf3	69	70.252	ENSPMAG00000005588	prpf3	99	69.316	Petromyzon_marinus
ENSPNAG00000001799	prpf3	99	73.380	ENSPCIG00000008795	PRPF3	100	73.239	Phascolarctos_cinereus
ENSPNAG00000001799	prpf3	100	78.151	ENSPFOG00000013638	prpf3	100	78.992	Poecilia_formosa
ENSPNAG00000001799	prpf3	100	78.261	ENSPLAG00000018103	prpf3	100	79.243	Poecilia_latipinna
ENSPNAG00000001799	prpf3	100	78.121	ENSPMEG00000023546	prpf3	100	79.102	Poecilia_mexicana
ENSPNAG00000001799	prpf3	100	78.822	ENSPREG00000017216	prpf3	100	79.383	Poecilia_reticulata
ENSPNAG00000001799	prpf3	93	72.054	ENSPPYG00000000900	PRPF3	99	71.903	Pongo_abelii
ENSPNAG00000001799	prpf3	76	62.593	ENSPPYG00000018646	-	99	62.778	Pongo_abelii
ENSPNAG00000001799	prpf3	87	74.595	ENSPCAG00000014908	PRPF3	87	74.434	Procavia_capensis
ENSPNAG00000001799	prpf3	99	73.099	ENSPCOG00000013828	PRPF3	100	72.958	Propithecus_coquereli
ENSPNAG00000001799	prpf3	99	72.817	ENSPVAG00000013472	PRPF3	100	72.676	Pteropus_vampyrus
ENSPNAG00000001799	prpf3	100	81.092	ENSPNYG00000004279	prpf3	100	81.653	Pundamilia_nyererei
ENSPNAG00000001799	prpf3	99	73.380	ENSRNOG00000025629	Prpf3	100	73.239	Rattus_norvegicus
ENSPNAG00000001799	prpf3	83	77.305	ENSRBIG00000028854	PRPF3	100	77.305	Rhinopithecus_bieti
ENSPNAG00000001799	prpf3	99	73.239	ENSRROG00000027464	PRPF3	100	73.099	Rhinopithecus_roxellana
ENSPNAG00000001799	prpf3	99	67.042	ENSSBOG00000033104	PRPF3	100	66.901	Saimiri_boliviensis_boliviensis
ENSPNAG00000001799	prpf3	99	72.996	ENSSHAG00000009548	PRPF3	100	72.855	Sarcophilus_harrisii
ENSPNAG00000001799	prpf3	100	87.758	ENSSFOG00015022014	prpf3	100	87.758	Scleropages_formosus
ENSPNAG00000001799	prpf3	100	81.513	ENSSMAG00000015739	prpf3	100	82.073	Scophthalmus_maximus
ENSPNAG00000001799	prpf3	100	78.371	ENSSDUG00000006840	prpf3	100	78.511	Seriola_dumerili
ENSPNAG00000001799	prpf3	100	82.797	ENSSLDG00000015423	prpf3	100	83.357	Seriola_lalandi_dorsalis
ENSPNAG00000001799	prpf3	99	73.239	ENSSARG00000011064	PRPF3	100	73.099	Sorex_araneus
ENSPNAG00000001799	prpf3	99	71.978	ENSSPUG00000000809	PRPF3	100	73.333	Sphenodon_punctatus
ENSPNAG00000001799	prpf3	100	86.054	ENSSPAG00000018721	prpf3	100	86.054	Stegastes_partitus
ENSPNAG00000001799	prpf3	99	73.239	ENSSSCG00000030119	PRPF3	100	75.657	Sus_scrofa
ENSPNAG00000001799	prpf3	99	64.045	ENSTGUG00000004552	PRPF3	100	63.611	Taeniopygia_guttata
ENSPNAG00000001799	prpf3	100	78.138	ENSTRUG00000014923	prpf3	100	78.420	Takifugu_rubripes
ENSPNAG00000001799	prpf3	99	88.043	ENSTNIG00000008058	prpf3	100	78.809	Tetraodon_nigroviridis
ENSPNAG00000001799	prpf3	81	73.469	ENSTBEG00000014072	PRPF3	88	74.830	Tupaia_belangeri
ENSPNAG00000001799	prpf3	99	68.310	ENSTTRG00000010616	PRPF3	100	68.169	Tursiops_truncatus
ENSPNAG00000001799	prpf3	85	76.044	ENSUAMG00000009345	PRPF3	100	75.657	Ursus_americanus
ENSPNAG00000001799	prpf3	99	73.239	ENSUMAG00000003720	PRPF3	100	73.099	Ursus_maritimus
ENSPNAG00000001799	prpf3	89	79.365	ENSVPAG00000005425	PRPF3	89	79.365	Vicugna_pacos
ENSPNAG00000001799	prpf3	99	74.961	ENSVVUG00000007933	PRPF3	100	74.961	Vulpes_vulpes
ENSPNAG00000001799	prpf3	99	71.629	ENSXETG00000018654	prpf3	100	71.770	Xenopus_tropicalis
ENSPNAG00000001799	prpf3	100	83.040	ENSXMAG00000016347	prpf3	100	83.360	Xiphophorus_maculatus