EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000001849 (Gene tree)
Gene ID: 108426305
Gene Symbol: cpsf2
Alias: zgc:92484
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 22148 bases
Position: chrKV575326.1:2124804-2146951
Accession: 108426305
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000005408	Beta-Casp	PF10996.8	2.6e-20	1	1
ENSPNAP00000005408	Lactamase_B	PF00753.27	1.8e-05	1	1
ENSPNAP00000005408	RMMBL	PF07521.12	3.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000005366	-	4404	XM_017695684	ENSPNAP00000005408	787 (aa)	XP_017551173	UPI0008148E16

Gene Model

Click here to download ENSPNAG00000001849's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000001849's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000001849	cpsf2	100	86.785	ENSG00000165934	CPSF2	100	88.750	Homo_sapiens
ENSPNAG00000001849	cpsf2	100	91.381	ENSAPOG00000001242	cpsf2	100	91.381	Acanthochromis_polyacanthus
ENSPNAG00000001849	cpsf2	100	91.139	ENSACIG00000009331	cpsf2	100	91.139	Amphilophus_citrinellus
ENSPNAG00000001849	cpsf2	100	91.381	ENSAOCG00000014095	cpsf2	100	91.381	Amphiprion_ocellaris
ENSPNAG00000001849	cpsf2	100	91.381	ENSAPEG00000009158	cpsf2	100	91.381	Amphiprion_percula
ENSPNAG00000001849	cpsf2	96	91.053	ENSATEG00000017644	cpsf2	99	89.632	Anabas_testudineus
ENSPNAG00000001849	cpsf2	100	86.565	ENSAPLG00000006330	CPSF2	100	86.565	Anas_platyrhynchos
ENSPNAG00000001849	cpsf2	100	86.912	ENSACAG00000009245	CPSF2	100	86.912	Anolis_carolinensis
ENSPNAG00000001849	cpsf2	100	86.912	ENSANAG00000022915	CPSF2	100	86.912	Aotus_nancymaae
ENSPNAG00000001849	cpsf2	100	96.569	ENSAMXG00000018696	cpsf2	100	96.569	Astyanax_mexicanus
ENSPNAG00000001849	cpsf2	100	86.912	ENSBTAG00000010227	CPSF2	100	86.912	Bos_taurus
ENSPNAG00000001849	cpsf2	100	42.142	WBGene00017313	cpsf-2	100	41.822	Caenorhabditis_elegans
ENSPNAG00000001849	cpsf2	100	86.912	ENSCJAG00000018069	CPSF2	100	86.912	Callithrix_jacchus
ENSPNAG00000001849	cpsf2	100	86.785	ENSCAFG00000010909	CPSF2	100	86.785	Canis_familiaris
ENSPNAG00000001849	cpsf2	100	86.785	ENSCAFG00020020670	CPSF2	100	86.785	Canis_lupus_dingo
ENSPNAG00000001849	cpsf2	100	86.912	ENSCHIG00000023848	CPSF2	100	86.912	Capra_hircus
ENSPNAG00000001849	cpsf2	100	86.658	ENSTSYG00000009036	CPSF2	100	86.658	Carlito_syrichta
ENSPNAG00000001849	cpsf2	100	86.912	ENSCPOG00000010899	CPSF2	100	86.912	Cavia_porcellus
ENSPNAG00000001849	cpsf2	100	86.912	ENSCCAG00000028088	CPSF2	100	86.912	Cebus_capucinus
ENSPNAG00000001849	cpsf2	100	86.912	ENSCATG00000030132	CPSF2	100	86.912	Cercocebus_atys
ENSPNAG00000001849	cpsf2	100	86.912	ENSCLAG00000012404	CPSF2	100	86.912	Chinchilla_lanigera
ENSPNAG00000001849	cpsf2	100	86.912	ENSCSAG00000011300	CPSF2	100	86.912	Chlorocebus_sabaeus
ENSPNAG00000001849	cpsf2	100	81.194	ENSCHOG00000012904	CPSF2	100	81.194	Choloepus_hoffmanni
ENSPNAG00000001849	cpsf2	100	86.912	ENSCPBG00000008766	CPSF2	97	86.912	Chrysemys_picta_bellii
ENSPNAG00000001849	cpsf2	100	54.286	ENSCING00000007881	-	100	53.789	Ciona_intestinalis
ENSPNAG00000001849	cpsf2	94	86.992	ENSCANG00000041651	CPSF2	100	86.974	Colobus_angolensis_palliatus
ENSPNAG00000001849	cpsf2	100	86.277	ENSCGRG00001006901	Cpsf2	100	86.277	Cricetulus_griseus_chok1gshd
ENSPNAG00000001849	cpsf2	100	86.277	ENSCGRG00000012416	Cpsf2	100	86.277	Cricetulus_griseus_crigri
ENSPNAG00000001849	cpsf2	100	90.114	ENSCSEG00000004116	cpsf2	100	90.114	Cynoglossus_semilaevis
ENSPNAG00000001849	cpsf2	100	90.241	ENSCVAG00000000095	cpsf2	100	90.368	Cyprinodon_variegatus
ENSPNAG00000001849	cpsf2	100	91.899	ENSDARG00000028971	cpsf2	100	91.899	Danio_rerio
ENSPNAG00000001849	cpsf2	100	86.912	ENSDNOG00000042757	CPSF2	100	86.912	Dasypus_novemcinctus
ENSPNAG00000001849	cpsf2	100	86.912	ENSDORG00000013709	Cpsf2	100	86.912	Dipodomys_ordii
ENSPNAG00000001849	cpsf2	100	53.523	FBgn0027873	Cpsf100	100	53.408	Drosophila_melanogaster
ENSPNAG00000001849	cpsf2	100	79.315	ENSETEG00000012123	CPSF2	100	79.315	Echinops_telfairi
ENSPNAG00000001849	cpsf2	52	77.506	ENSEBUG00000012098	cpsf2	93	77.506	Eptatretus_burgeri
ENSPNAG00000001849	cpsf2	89	91.809	ENSEASG00005021193	CPSF2	100	91.809	Equus_asinus_asinus
ENSPNAG00000001849	cpsf2	100	86.785	ENSECAG00000023935	CPSF2	100	86.785	Equus_caballus
ENSPNAG00000001849	cpsf2	100	90.464	ENSELUG00000008442	cpsf2	100	90.464	Esox_lucius
ENSPNAG00000001849	cpsf2	100	86.785	ENSFCAG00000007886	CPSF2	100	86.785	Felis_catus
ENSPNAG00000001849	cpsf2	100	86.658	ENSFALG00000002412	CPSF2	100	86.658	Ficedula_albicollis
ENSPNAG00000001849	cpsf2	100	86.785	ENSFDAG00000006327	CPSF2	100	86.785	Fukomys_damarensis
ENSPNAG00000001849	cpsf2	96	89.281	ENSFHEG00000015465	cpsf2	98	89.412	Fundulus_heteroclitus
ENSPNAG00000001849	cpsf2	100	88.035	ENSGMOG00000008761	cpsf2	100	88.035	Gadus_morhua
ENSPNAG00000001849	cpsf2	100	86.785	ENSGALG00000010783	CPSF2	100	87.166	Gallus_gallus
ENSPNAG00000001849	cpsf2	100	90.241	ENSGAFG00000001407	cpsf2	100	90.241	Gambusia_affinis
ENSPNAG00000001849	cpsf2	100	90.368	ENSGACG00000008418	cpsf2	100	90.368	Gasterosteus_aculeatus
ENSPNAG00000001849	cpsf2	100	86.785	ENSGAGG00000008287	CPSF2	100	86.785	Gopherus_agassizii
ENSPNAG00000001849	cpsf2	100	86.785	ENSGGOG00000011799	CPSF2	100	86.785	Gorilla_gorilla
ENSPNAG00000001849	cpsf2	100	90.368	ENSHBUG00000023466	cpsf2	100	90.368	Haplochromis_burtoni
ENSPNAG00000001849	cpsf2	100	86.912	ENSHGLG00000018311	CPSF2	100	86.912	Heterocephalus_glaber_female
ENSPNAG00000001849	cpsf2	100	86.912	ENSHGLG00100016460	CPSF2	100	86.912	Heterocephalus_glaber_male
ENSPNAG00000001849	cpsf2	100	89.480	ENSHCOG00000019527	cpsf2	98	89.480	Hippocampus_comes
ENSPNAG00000001849	cpsf2	100	95.044	ENSIPUG00000020857	cpsf2	100	95.044	Ictalurus_punctatus
ENSPNAG00000001849	cpsf2	100	86.912	ENSSTOG00000009528	CPSF2	100	86.912	Ictidomys_tridecemlineatus
ENSPNAG00000001849	cpsf2	100	86.785	ENSJJAG00000017925	Cpsf2	100	86.785	Jaculus_jaculus
ENSPNAG00000001849	cpsf2	100	88.847	ENSKMAG00000019429	cpsf2	100	88.847	Kryptolebias_marmoratus
ENSPNAG00000001849	cpsf2	95	89.572	ENSLBEG00000011585	cpsf2	100	89.706	Labrus_bergylta
ENSPNAG00000001849	cpsf2	100	84.879	ENSLACG00000019024	CPSF2	100	85.388	Latimeria_chalumnae
ENSPNAG00000001849	cpsf2	100	91.255	ENSLOCG00000014102	cpsf2	100	91.255	Lepisosteus_oculatus
ENSPNAG00000001849	cpsf2	100	86.565	ENSLAFG00000004891	CPSF2	100	86.565	Loxodonta_africana
ENSPNAG00000001849	cpsf2	100	86.912	ENSMFAG00000041212	CPSF2	100	86.912	Macaca_fascicularis
ENSPNAG00000001849	cpsf2	100	86.912	ENSMMUG00000000699	CPSF2	100	86.912	Macaca_mulatta
ENSPNAG00000001849	cpsf2	100	86.912	ENSMNEG00000031584	CPSF2	100	86.912	Macaca_nemestrina
ENSPNAG00000001849	cpsf2	100	86.912	ENSMLEG00000029394	CPSF2	100	86.912	Mandrillus_leucophaeus
ENSPNAG00000001849	cpsf2	100	90.748	ENSMAMG00000004235	cpsf2	100	90.748	Mastacembelus_armatus
ENSPNAG00000001849	cpsf2	100	90.494	ENSMZEG00005001769	cpsf2	100	90.494	Maylandia_zebra
ENSPNAG00000001849	cpsf2	100	86.548	ENSMGAG00000013122	CPSF2	100	86.929	Meleagris_gallopavo
ENSPNAG00000001849	cpsf2	100	86.277	ENSMAUG00000015160	Cpsf2	100	86.277	Mesocricetus_auratus
ENSPNAG00000001849	cpsf2	100	86.785	ENSMICG00000016441	CPSF2	100	86.785	Microcebus_murinus
ENSPNAG00000001849	cpsf2	100	86.277	ENSMOCG00000015372	Cpsf2	100	86.277	Microtus_ochrogaster
ENSPNAG00000001849	cpsf2	100	85.678	ENSMMOG00000015590	cpsf2	100	85.678	Mola_mola
ENSPNAG00000001849	cpsf2	100	87.039	ENSMODG00000002042	CPSF2	100	87.039	Monodelphis_domestica
ENSPNAG00000001849	cpsf2	100	87.199	ENSMALG00000022275	cpsf2	100	87.199	Monopterus_albus
ENSPNAG00000001849	cpsf2	100	86.277	ENSMUSG00000041781	Cpsf2	100	86.277	Mus_musculus
ENSPNAG00000001849	cpsf2	100	86.150	MGP_PahariEiJ_G0029791	Cpsf2	100	86.150	Mus_pahari
ENSPNAG00000001849	cpsf2	100	86.277	MGP_SPRETEiJ_G0018877	Cpsf2	100	86.277	Mus_spretus
ENSPNAG00000001849	cpsf2	100	86.912	ENSMPUG00000007617	CPSF2	98	86.912	Mustela_putorius_furo
ENSPNAG00000001849	cpsf2	100	86.531	ENSMLUG00000005570	CPSF2	100	86.531	Myotis_lucifugus
ENSPNAG00000001849	cpsf2	100	86.531	ENSNGAG00000020312	Cpsf2	100	86.531	Nannospalax_galili
ENSPNAG00000001849	cpsf2	100	90.875	ENSNBRG00000022402	cpsf2	100	90.875	Neolamprologus_brichardi
ENSPNAG00000001849	cpsf2	100	86.150	ENSNLEG00000017132	CPSF2	100	86.150	Nomascus_leucogenys
ENSPNAG00000001849	cpsf2	91	94.822	ENSMEUG00000008138	CPSF2	91	94.822	Notamacropus_eugenii
ENSPNAG00000001849	cpsf2	94	82.090	ENSOPRG00000008484	-	100	82.090	Ochotona_princeps
ENSPNAG00000001849	cpsf2	100	86.531	ENSODEG00000008682	CPSF2	100	86.531	Octodon_degus
ENSPNAG00000001849	cpsf2	100	91.381	ENSONIG00000005901	cpsf2	100	91.381	Oreochromis_niloticus
ENSPNAG00000001849	cpsf2	100	87.166	ENSOANG00000003822	CPSF2	100	87.166	Ornithorhynchus_anatinus
ENSPNAG00000001849	cpsf2	100	86.785	ENSOCUG00000005713	CPSF2	100	86.785	Oryctolagus_cuniculus
ENSPNAG00000001849	cpsf2	100	84.664	ENSORLG00000011628	cpsf2	100	84.664	Oryzias_latipes
ENSPNAG00000001849	cpsf2	100	90.368	ENSORLG00020016980	cpsf2	100	90.368	Oryzias_latipes_hni
ENSPNAG00000001849	cpsf2	100	90.368	ENSORLG00015011910	cpsf2	100	90.368	Oryzias_latipes_hsok
ENSPNAG00000001849	cpsf2	100	89.734	ENSOMEG00000022876	cpsf2	100	89.734	Oryzias_melastigma
ENSPNAG00000001849	cpsf2	100	83.904	ENSOARG00000012889	CPSF2	100	83.904	Ovis_aries
ENSPNAG00000001849	cpsf2	100	86.785	ENSPPAG00000039666	CPSF2	100	86.785	Pan_paniscus
ENSPNAG00000001849	cpsf2	99	86.768	ENSPPRG00000010869	CPSF2	100	86.768	Panthera_pardus
ENSPNAG00000001849	cpsf2	100	86.785	ENSPTIG00000021202	CPSF2	100	86.785	Panthera_tigris_altaica
ENSPNAG00000001849	cpsf2	100	86.785	ENSPTRG00000006651	CPSF2	100	86.785	Pan_troglodytes
ENSPNAG00000001849	cpsf2	100	86.912	ENSPANG00000017417	CPSF2	100	86.912	Papio_anubis
ENSPNAG00000001849	cpsf2	100	86.023	ENSPKIG00000021453	cpsf2	100	86.023	Paramormyrops_kingsleyae
ENSPNAG00000001849	cpsf2	100	86.912	ENSPSIG00000006289	CPSF2	100	86.912	Pelodiscus_sinensis
ENSPNAG00000001849	cpsf2	76	84.551	ENSPMGG00000002511	cpsf2	99	85.191	Periophthalmus_magnuspinnatus
ENSPNAG00000001849	cpsf2	100	86.404	ENSPEMG00000007917	Cpsf2	100	86.404	Peromyscus_maniculatus_bairdii
ENSPNAG00000001849	cpsf2	100	73.744	ENSPMAG00000006205	cpsf2	100	73.744	Petromyzon_marinus
ENSPNAG00000001849	cpsf2	100	87.039	ENSPCIG00000011393	CPSF2	100	87.039	Phascolarctos_cinereus
ENSPNAG00000001849	cpsf2	100	90.368	ENSPFOG00000018648	cpsf2	100	90.368	Poecilia_formosa
ENSPNAG00000001849	cpsf2	100	90.368	ENSPLAG00000019199	cpsf2	99	90.368	Poecilia_latipinna
ENSPNAG00000001849	cpsf2	96	90.526	ENSPMEG00000012100	cpsf2	100	89.973	Poecilia_mexicana
ENSPNAG00000001849	cpsf2	100	90.241	ENSPREG00000008960	cpsf2	100	90.241	Poecilia_reticulata
ENSPNAG00000001849	cpsf2	64	82.635	ENSPPYG00000029685	-	100	82.635	Pongo_abelii
ENSPNAG00000001849	cpsf2	100	86.658	ENSPCAG00000012477	CPSF2	100	86.658	Procavia_capensis
ENSPNAG00000001849	cpsf2	100	86.912	ENSPCOG00000026387	CPSF2	100	86.912	Propithecus_coquereli
ENSPNAG00000001849	cpsf2	65	92.347	ENSPVAG00000004223	CPSF2	65	92.347	Pteropus_vampyrus
ENSPNAG00000001849	cpsf2	100	90.127	ENSPNYG00000023356	cpsf2	100	90.127	Pundamilia_nyererei
ENSPNAG00000001849	cpsf2	100	86.404	ENSRNOG00000005733	Cpsf2	100	86.404	Rattus_norvegicus
ENSPNAG00000001849	cpsf2	100	86.912	ENSRBIG00000044792	CPSF2	100	86.912	Rhinopithecus_bieti
ENSPNAG00000001849	cpsf2	100	86.912	ENSRROG00000034875	CPSF2	100	86.912	Rhinopithecus_roxellana
ENSPNAG00000001849	cpsf2	100	86.912	ENSSBOG00000024571	CPSF2	100	86.912	Saimiri_boliviensis_boliviensis
ENSPNAG00000001849	cpsf2	100	87.039	ENSSHAG00000010458	CPSF2	100	87.039	Sarcophilus_harrisii
ENSPNAG00000001849	cpsf2	100	92.630	ENSSFOG00015002117	cpsf2	100	92.630	Scleropages_formosus
ENSPNAG00000001849	cpsf2	100	90.241	ENSSMAG00000002001	cpsf2	100	90.241	Scophthalmus_maximus
ENSPNAG00000001849	cpsf2	100	92.015	ENSSDUG00000004084	cpsf2	100	92.015	Seriola_dumerili
ENSPNAG00000001849	cpsf2	100	91.508	ENSSLDG00000024330	cpsf2	100	91.508	Seriola_lalandi_dorsalis
ENSPNAG00000001849	cpsf2	58	96.040	ENSSARG00000009784	-	63	96.040	Sorex_araneus
ENSPNAG00000001849	cpsf2	100	86.785	ENSSPUG00000013485	CPSF2	100	86.785	Sphenodon_punctatus
ENSPNAG00000001849	cpsf2	100	91.255	ENSSPAG00000013284	cpsf2	100	91.255	Stegastes_partitus
ENSPNAG00000001849	cpsf2	100	86.785	ENSSSCG00000002447	CPSF2	100	86.785	Sus_scrofa
ENSPNAG00000001849	cpsf2	100	86.785	ENSTGUG00000012571	-	100	86.785	Taeniopygia_guttata
ENSPNAG00000001849	cpsf2	100	90.368	ENSTRUG00000003742	cpsf2	100	90.368	Takifugu_rubripes
ENSPNAG00000001849	cpsf2	100	88.748	ENSTNIG00000012228	cpsf2	100	89.760	Tetraodon_nigroviridis
ENSPNAG00000001849	cpsf2	91	84.738	ENSTBEG00000004530	CPSF2	94	84.738	Tupaia_belangeri
ENSPNAG00000001849	cpsf2	88	87.500	ENSTTRG00000008697	CPSF2	88	87.500	Tursiops_truncatus
ENSPNAG00000001849	cpsf2	100	86.912	ENSUAMG00000028071	CPSF2	100	86.912	Ursus_americanus
ENSPNAG00000001849	cpsf2	100	86.912	ENSUMAG00000005029	CPSF2	100	91.304	Ursus_maritimus
ENSPNAG00000001849	cpsf2	99	86.768	ENSVPAG00000003503	CPSF2	100	86.768	Vicugna_pacos
ENSPNAG00000001849	cpsf2	100	86.785	ENSVVUG00000024642	CPSF2	100	86.785	Vulpes_vulpes
ENSPNAG00000001849	cpsf2	100	85.133	ENSXETG00000010289	cpsf2	100	85.133	Xenopus_tropicalis
ENSPNAG00000001849	cpsf2	100	90.368	ENSXCOG00000001764	cpsf2	100	90.368	Xiphophorus_couchianus
ENSPNAG00000001849	cpsf2	100	90.621	ENSXMAG00000017048	cpsf2	100	90.621	Xiphophorus_maculatus