EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000001891 (Gene tree)
Gene ID: 108440272
Gene Symbol: sf3b2
Alias: fb53c07|wu:fb53c07|wu:fb93b08|zgc:136773
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 13174 bases
Position: chrKV575631.1:424194-437367
Accession: 108440272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000026414	DUF382	PF04037.13	2.1e-58	1	1
ENSPNAP00000026414	SAP	PF02037.27	7.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000005171	-	2922	XM_017719063	ENSPNAP00000026414	882 (aa)	XP_017574552	UPI000814A412

Gene Model

Click here to download ENSPNAG00000001891's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000001891's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000001891	sf3b2	86	73.214	ENSG00000087365	SF3B2	99	87.267	Homo_sapiens
ENSPNAG00000001891	sf3b2	97	78.702	ENSAPOG00000001974	sf3b2	96	76.484	Acanthochromis_polyacanthus
ENSPNAG00000001891	sf3b2	86	73.616	ENSAMEG00000017206	SF3B2	86	72.046	Ailuropoda_melanoleuca
ENSPNAG00000001891	sf3b2	100	74.699	ENSACIG00000000624	sf3b2	100	75.862	Amphilophus_citrinellus
ENSPNAG00000001891	sf3b2	100	79.556	ENSAOCG00000009207	sf3b2	100	77.691	Amphiprion_ocellaris
ENSPNAG00000001891	sf3b2	100	79.867	ENSAPEG00000002762	sf3b2	97	77.556	Amphiprion_percula
ENSPNAG00000001891	sf3b2	97	57.080	ENSACAG00000008615	SF3B2	98	56.264	Anolis_carolinensis
ENSPNAG00000001891	sf3b2	86	73.342	ENSANAG00000029120	SF3B2	97	67.303	Aotus_nancymaae
ENSPNAG00000001891	sf3b2	100	75.224	ENSACLG00000014771	sf3b2	100	75.196	Astatotilapia_calliptera
ENSPNAG00000001891	sf3b2	100	89.050	ENSAMXG00000007929	sf3b2	100	88.939	Astyanax_mexicanus
ENSPNAG00000001891	sf3b2	86	73.969	ENSBTAG00000002778	SF3B2	86	72.173	Bos_taurus
ENSPNAG00000001891	sf3b2	62	49.645	WBGene00021004	sftb-2	89	49.453	Caenorhabditis_elegans
ENSPNAG00000001891	sf3b2	86	73.214	ENSCJAG00000001656	SF3B2	97	67.191	Callithrix_jacchus
ENSPNAG00000001891	sf3b2	86	73.840	ENSCAFG00000013033	SF3B2	86	72.137	Canis_familiaris
ENSPNAG00000001891	sf3b2	86	73.840	ENSCAFG00020015382	SF3B2	86	72.137	Canis_lupus_dingo
ENSPNAG00000001891	sf3b2	86	73.969	ENSCHIG00000011211	SF3B2	86	72.173	Capra_hircus
ENSPNAG00000001891	sf3b2	99	66.813	ENSTSYG00000000959	SF3B2	97	68.462	Carlito_syrichta
ENSPNAG00000001891	sf3b2	71	72.685	ENSCPOG00000008294	SF3B2	96	65.995	Cavia_porcellus
ENSPNAG00000001891	sf3b2	86	73.214	ENSCCAG00000035256	SF3B2	97	67.191	Cebus_capucinus
ENSPNAG00000001891	sf3b2	86	73.214	ENSCATG00000042240	SF3B2	88	71.808	Cercocebus_atys
ENSPNAG00000001891	sf3b2	81	74.387	ENSCLAG00000016852	SF3B2	97	67.117	Chinchilla_lanigera
ENSPNAG00000001891	sf3b2	86	73.214	ENSCSAG00000008121	SF3B2	86	71.808	Chlorocebus_sabaeus
ENSPNAG00000001891	sf3b2	89	85.075	ENSCHOG00000001476	SF3B2	90	76.617	Choloepus_hoffmanni
ENSPNAG00000001891	sf3b2	86	72.587	ENSCPBG00000022465	SF3B2	88	80.343	Chrysemys_picta_bellii
ENSPNAG00000001891	sf3b2	73	60.429	ENSCING00000005665	-	83	67.358	Ciona_intestinalis
ENSPNAG00000001891	sf3b2	61	66.604	ENSCSAVG00000002029	-	83	66.792	Ciona_savignyi
ENSPNAG00000001891	sf3b2	86	73.214	ENSCANG00000039680	SF3B2	86	71.808	Colobus_angolensis_palliatus
ENSPNAG00000001891	sf3b2	81	74.114	ENSCGRG00001015741	Sf3b2	97	67.193	Cricetulus_griseus_chok1gshd
ENSPNAG00000001891	sf3b2	81	74.114	ENSCGRG00000018110	Sf3b2	97	67.193	Cricetulus_griseus_crigri
ENSPNAG00000001891	sf3b2	100	69.369	ENSCSEG00000000230	sf3b2	100	67.829	Cynoglossus_semilaevis
ENSPNAG00000001891	sf3b2	100	73.754	ENSCVAG00000003357	sf3b2	87	75.990	Cyprinodon_variegatus
ENSPNAG00000001891	sf3b2	98	76.994	ENSDARG00000018049	sf3b2	99	76.301	Danio_rerio
ENSPNAG00000001891	sf3b2	98	67.673	ENSDNOG00000009484	SF3B2	94	70.446	Dasypus_novemcinctus
ENSPNAG00000001891	sf3b2	81	72.752	ENSDORG00000002495	Sf3b2	86	70.127	Dipodomys_ordii
ENSPNAG00000001891	sf3b2	57	80.410	ENSETEG00000020284	SF3B2	83	79.587	Echinops_telfairi
ENSPNAG00000001891	sf3b2	90	61.806	ENSEBUG00000013703	sf3b2	99	55.106	Eptatretus_burgeri
ENSPNAG00000001891	sf3b2	86	73.590	ENSEASG00005004508	SF3B2	86	72.152	Equus_asinus_asinus
ENSPNAG00000001891	sf3b2	86	73.590	ENSECAG00000024461	SF3B2	86	72.152	Equus_caballus
ENSPNAG00000001891	sf3b2	58	79.200	ENSEEUG00000014278	-	58	76.800	Erinaceus_europaeus
ENSPNAG00000001891	sf3b2	100	78.308	ENSELUG00000005586	sf3b2	100	76.439	Esox_lucius
ENSPNAG00000001891	sf3b2	86	73.711	ENSFCAG00000013289	SF3B2	86	72.137	Felis_catus
ENSPNAG00000001891	sf3b2	73	69.183	ENSFALG00000014653	SF3B2	91	69.337	Ficedula_albicollis
ENSPNAG00000001891	sf3b2	86	71.648	ENSFDAG00000019806	SF3B2	97	68.652	Fukomys_damarensis
ENSPNAG00000001891	sf3b2	100	74.503	ENSFHEG00000020968	sf3b2	87	76.076	Fundulus_heteroclitus
ENSPNAG00000001891	sf3b2	74	85.671	ENSGMOG00000012131	sf3b2	99	84.756	Gadus_morhua
ENSPNAG00000001891	sf3b2	100	75.303	ENSGAFG00000001675	sf3b2	100	73.649	Gambusia_affinis
ENSPNAG00000001891	sf3b2	74	82.727	ENSGACG00000019012	sf3b2	99	83.584	Gasterosteus_aculeatus
ENSPNAG00000001891	sf3b2	98	67.614	ENSGAGG00000023916	SF3B2	98	67.893	Gopherus_agassizii
ENSPNAG00000001891	sf3b2	78	88.056	ENSGGOG00000028448	SF3B2	85	87.222	Gorilla_gorilla
ENSPNAG00000001891	sf3b2	100	75.336	ENSHBUG00000017349	sf3b2	100	75.307	Haplochromis_burtoni
ENSPNAG00000001891	sf3b2	81	74.251	ENSHGLG00000010807	SF3B2	97	67.342	Heterocephalus_glaber_female
ENSPNAG00000001891	sf3b2	86	73.367	ENSHGLG00100006361	SF3B2	97	68.806	Heterocephalus_glaber_male
ENSPNAG00000001891	sf3b2	100	74.776	ENSHCOG00000016203	sf3b2	100	73.490	Hippocampus_comes
ENSPNAG00000001891	sf3b2	100	84.910	ENSIPUG00000009383	sf3b2	100	85.135	Ictalurus_punctatus
ENSPNAG00000001891	sf3b2	86	73.367	ENSSTOG00000028892	SF3B2	97	68.468	Ictidomys_tridecemlineatus
ENSPNAG00000001891	sf3b2	81	73.978	ENSJJAG00000018193	Sf3b2	97	66.517	Jaculus_jaculus
ENSPNAG00000001891	sf3b2	60	91.745	ENSKMAG00000020181	sf3b2	100	70.824	Kryptolebias_marmoratus
ENSPNAG00000001891	sf3b2	100	76.600	ENSLBEG00000027739	sf3b2	100	76.940	Labrus_bergylta
ENSPNAG00000001891	sf3b2	72	80.560	ENSLACG00000010429	SF3B2	100	67.689	Latimeria_chalumnae
ENSPNAG00000001891	sf3b2	81	73.388	ENSLAFG00000002128	SF3B2	85	70.356	Loxodonta_africana
ENSPNAG00000001891	sf3b2	86	73.121	ENSMFAG00000003064	SF3B2	88	71.717	Macaca_fascicularis
ENSPNAG00000001891	sf3b2	86	68.935	ENSMMUG00000011743	SF3B2	86	67.427	Macaca_mulatta
ENSPNAG00000001891	sf3b2	86	73.214	ENSMNEG00000034437	SF3B2	88	71.808	Macaca_nemestrina
ENSPNAG00000001891	sf3b2	86	73.146	ENSMLEG00000029373	SF3B2	97	68.504	Mandrillus_leucophaeus
ENSPNAG00000001891	sf3b2	100	77.348	ENSMAMG00000014103	sf3b2	100	77.238	Mastacembelus_armatus
ENSPNAG00000001891	sf3b2	100	75.224	ENSMZEG00005020789	sf3b2	100	75.196	Maylandia_zebra
ENSPNAG00000001891	sf3b2	86	73.367	ENSMICG00000008565	-	97	68.468	Microcebus_murinus
ENSPNAG00000001891	sf3b2	99	64.309	ENSMICG00000016942	-	97	65.685	Microcebus_murinus
ENSPNAG00000001891	sf3b2	81	73.978	ENSMOCG00000003136	Sf3b2	97	67.080	Microtus_ochrogaster
ENSPNAG00000001891	sf3b2	100	74.803	ENSMMOG00000012928	sf3b2	87	77.132	Mola_mola
ENSPNAG00000001891	sf3b2	72	73.988	ENSMODG00000025020	-	100	72.430	Monodelphis_domestica
ENSPNAG00000001891	sf3b2	81	72.283	ENSMODG00000008490	-	91	72.186	Monodelphis_domestica
ENSPNAG00000001891	sf3b2	100	73.208	ENSMALG00000015137	sf3b2	86	75.508	Monopterus_albus
ENSPNAG00000001891	sf3b2	81	72.752	MGP_CAROLIEiJ_G0022539	Sf3b2	86	70.140	Mus_caroli
ENSPNAG00000001891	sf3b2	81	73.978	ENSMUSG00000024853	Sf3b2	97	66.892	Mus_musculus
ENSPNAG00000001891	sf3b2	81	73.706	MGP_PahariEiJ_G0014036	Sf3b2	97	66.742	Mus_pahari
ENSPNAG00000001891	sf3b2	81	73.842	MGP_SPRETEiJ_G0023453	Sf3b2	97	67.379	Mus_spretus
ENSPNAG00000001891	sf3b2	86	73.840	ENSMPUG00000011349	SF3B2	86	72.137	Mustela_putorius_furo
ENSPNAG00000001891	sf3b2	98	67.973	ENSMLUG00000011136	SF3B2	86	72.137	Myotis_lucifugus
ENSPNAG00000001891	sf3b2	81	73.913	ENSNGAG00000012103	Sf3b2	97	67.494	Nannospalax_galili
ENSPNAG00000001891	sf3b2	86	69.962	ENSNLEG00000006007	SF3B2	59	84.082	Nomascus_leucogenys
ENSPNAG00000001891	sf3b2	78	82.451	ENSMEUG00000000019	SF3B2	67	81.616	Notamacropus_eugenii
ENSPNAG00000001891	sf3b2	98	61.774	ENSODEG00000017764	SF3B2	97	63.698	Octodon_degus
ENSPNAG00000001891	sf3b2	100	77.076	ENSONIG00000013068	sf3b2	100	75.996	Oreochromis_niloticus
ENSPNAG00000001891	sf3b2	81	67.886	ENSOANG00000012482	SF3B2	62	81.612	Ornithorhynchus_anatinus
ENSPNAG00000001891	sf3b2	98	67.727	ENSOCUG00000015722	-	97	67.386	Oryctolagus_cuniculus
ENSPNAG00000001891	sf3b2	57	49.023	ENSOCUG00000024154	-	95	48.664	Oryctolagus_cuniculus
ENSPNAG00000001891	sf3b2	100	73.631	ENSORLG00000008235	sf3b2	97	72.564	Oryzias_latipes
ENSPNAG00000001891	sf3b2	100	73.631	ENSORLG00020005357	sf3b2	100	72.564	Oryzias_latipes_hni
ENSPNAG00000001891	sf3b2	100	73.855	ENSORLG00015022454	sf3b2	83	79.717	Oryzias_latipes_hsok
ENSPNAG00000001891	sf3b2	100	73.714	ENSOMEG00000017480	sf3b2	100	73.937	Oryzias_melastigma
ENSPNAG00000001891	sf3b2	86	68.861	ENSOGAG00000005799	SF3B2	59	86.517	Otolemur_garnettii
ENSPNAG00000001891	sf3b2	98	67.345	ENSOARG00000002125	SF3B2	100	73.607	Ovis_aries
ENSPNAG00000001891	sf3b2	86	73.214	ENSPPAG00000007359	SF3B2	86	71.808	Pan_paniscus
ENSPNAG00000001891	sf3b2	86	73.711	ENSPPRG00000013334	SF3B2	86	72.137	Panthera_pardus
ENSPNAG00000001891	sf3b2	86	73.711	ENSPTIG00000015022	SF3B2	86	72.137	Panthera_tigris_altaica
ENSPNAG00000001891	sf3b2	86	73.214	ENSPTRG00000003912	SF3B2	86	71.808	Pan_troglodytes
ENSPNAG00000001891	sf3b2	86	73.214	ENSPANG00000008593	SF3B2	88	71.808	Papio_anubis
ENSPNAG00000001891	sf3b2	100	77.580	ENSPKIG00000016576	sf3b2	100	75.333	Paramormyrops_kingsleyae
ENSPNAG00000001891	sf3b2	75	82.119	ENSPSIG00000003158	SF3B2	100	71.464	Pelodiscus_sinensis
ENSPNAG00000001891	sf3b2	93	75.000	ENSPMGG00000000819	sf3b2	94	74.323	Periophthalmus_magnuspinnatus
ENSPNAG00000001891	sf3b2	82	66.488	ENSPEMG00000015451	-	90	67.030	Peromyscus_maniculatus_bairdii
ENSPNAG00000001891	sf3b2	81	73.978	ENSPEMG00000015437	Sf3b2	97	66.855	Peromyscus_maniculatus_bairdii
ENSPNAG00000001891	sf3b2	98	65.998	ENSPCIG00000008381	SF3B2	99	67.237	Phascolarctos_cinereus
ENSPNAG00000001891	sf3b2	100	74.172	ENSPFOG00000002552	sf3b2	100	73.422	Poecilia_formosa
ENSPNAG00000001891	sf3b2	100	74.393	ENSPLAG00000001471	sf3b2	100	73.620	Poecilia_latipinna
ENSPNAG00000001891	sf3b2	100	74.254	ENSPMEG00000013180	sf3b2	100	73.503	Poecilia_mexicana
ENSPNAG00000001891	sf3b2	86	77.179	ENSPREG00000002665	sf3b2	87	76.106	Poecilia_reticulata
ENSPNAG00000001891	sf3b2	59	67.652	ENSPPYG00000003034	-	94	62.654	Pongo_abelii
ENSPNAG00000001891	sf3b2	86	71.301	ENSPCAG00000005129	SF3B2	86	70.976	Procavia_capensis
ENSPNAG00000001891	sf3b2	86	73.087	ENSPCOG00000025375	SF3B2	97	68.238	Propithecus_coquereli
ENSPNAG00000001891	sf3b2	55	93.421	ENSPVAG00000005466	-	81	93.421	Pteropus_vampyrus
ENSPNAG00000001891	sf3b2	53	88.966	ENSPVAG00000016975	-	52	88.276	Pteropus_vampyrus
ENSPNAG00000001891	sf3b2	88	78.129	ENSPNYG00000023594	sf3b2	100	76.891	Pundamilia_nyererei
ENSPNAG00000001891	sf3b2	81	73.706	ENSRNOG00000020412	Sf3b2	97	66.742	Rattus_norvegicus
ENSPNAG00000001891	sf3b2	86	73.342	ENSRBIG00000034065	SF3B2	91	68.129	Rhinopithecus_bieti
ENSPNAG00000001891	sf3b2	86	73.342	ENSRROG00000034496	SF3B2	86	71.934	Rhinopithecus_roxellana
ENSPNAG00000001891	sf3b2	98	68.249	ENSSBOG00000026337	SF3B2	97	67.195	Saimiri_boliviensis_boliviensis
ENSPNAG00000001891	sf3b2	96	55.418	ENSSHAG00000018043	-	100	56.723	Sarcophilus_harrisii
ENSPNAG00000001891	sf3b2	72	74.884	ENSSHAG00000010933	-	97	64.062	Sarcophilus_harrisii
ENSPNAG00000001891	sf3b2	100	78.125	ENSSFOG00015021125	sf3b2	100	76.281	Scleropages_formosus
ENSPNAG00000001891	sf3b2	100	77.473	ENSSMAG00000004079	sf3b2	97	74.863	Scophthalmus_maximus
ENSPNAG00000001891	sf3b2	60	94.307	ENSSLDG00000006838	sf3b2	100	76.889	Seriola_lalandi_dorsalis
ENSPNAG00000001891	sf3b2	52	93.651	ENSSARG00000003707	-	52	93.651	Sorex_araneus
ENSPNAG00000001891	sf3b2	71	81.132	ENSSPUG00000009198	SF3B2	98	67.193	Sphenodon_punctatus
ENSPNAG00000001891	sf3b2	100	77.140	ENSSPAG00000004406	sf3b2	59	93.573	Stegastes_partitus
ENSPNAG00000001891	sf3b2	86	73.711	ENSSSCG00000012957	SF3B2	86	72.137	Sus_scrofa
ENSPNAG00000001891	sf3b2	100	63.503	ENSTRUG00000007611	sf3b2	97	73.043	Takifugu_rubripes
ENSPNAG00000001891	sf3b2	87	75.357	ENSTNIG00000007441	sf3b2	89	74.648	Tetraodon_nigroviridis
ENSPNAG00000001891	sf3b2	88	66.253	ENSTBEG00000004258	SF3B2	78	80.272	Tupaia_belangeri
ENSPNAG00000001891	sf3b2	86	73.745	ENSTTRG00000014339	SF3B2	86	72.173	Tursiops_truncatus
ENSPNAG00000001891	sf3b2	84	72.991	ENSUAMG00000020754	SF3B2	82	71.573	Ursus_americanus
ENSPNAG00000001891	sf3b2	86	73.711	ENSUMAG00000010994	SF3B2	86	72.137	Ursus_maritimus
ENSPNAG00000001891	sf3b2	60	78.400	ENSVPAG00000008695	SF3B2	64	76.000	Vicugna_pacos
ENSPNAG00000001891	sf3b2	86	73.711	ENSVVUG00000027029	SF3B2	86	72.010	Vulpes_vulpes
ENSPNAG00000001891	sf3b2	89	65.299	ENSXETG00000008422	sf3b2	86	73.021	Xenopus_tropicalis
ENSPNAG00000001891	sf3b2	79	79.412	ENSXCOG00000008943	sf3b2	80	91.132	Xiphophorus_couchianus
ENSPNAG00000001891	sf3b2	100	73.077	ENSXMAG00000008467	sf3b2	87	74.937	Xiphophorus_maculatus