EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000001917 (Gene tree)
Gene ID: 108441482
Gene Symbol: opa1
Alias: fk62d06|wu:fb77a10|wu:fk62d06|zgc:92092
Full Name: OPA1%2C mitochondrial dynamin like GTPase
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 42539 bases
Position: chrKV575295.1:3190379-3232917
Accession: 108441482
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000005300	MMR_HSR1	PF01926.23	9.5e-06	1	1
ENSPNAP00000005345	MMR_HSR1	PF01926.23	9.8e-06	1	1
ENSPNAP00000026329	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSPNAP00000026368	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000005303	-	5060	XM_017721036	ENSPNAP00000026368	982 (aa)	XP_017576525	UPI0008143D7D
ENSPNAT00000005385	-	5012	XM_017721053	ENSPNAP00000026329	966 (aa)	XP_017576542	UPI0008148A19
ENSPNAT00000005454	-	4943	-	ENSPNAP00000005345	943 (aa)	-	-
ENSPNAT00000005523	-	2772	-	ENSPNAP00000005300	923 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000001917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000001917's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000001917	opa1	98	95.244	ENSAPOG00000011980	opa1	100	90.974	Acanthochromis_polyacanthus
ENSPNAG00000001917	opa1	98	91.548	ENSACIG00000012521	opa1	97	91.658	Amphilophus_citrinellus
ENSPNAG00000001917	opa1	98	95.244	ENSAOCG00000020559	opa1	100	90.872	Amphiprion_ocellaris
ENSPNAG00000001917	opa1	100	90.702	ENSAPEG00000001641	opa1	100	91.012	Amphiprion_percula
ENSPNAG00000001917	opa1	100	96.066	ENSAMXG00000012295	opa1	100	96.313	Astyanax_mexicanus
ENSPNAG00000001917	opa1	98	49.438	WBGene00001134	eat-3	99	49.440	Caenorhabditis_elegans
ENSPNAG00000001917	opa1	99	84.548	ENSCSEG00000014266	opa1	97	84.548	Cynoglossus_semilaevis
ENSPNAG00000001917	opa1	98	94.679	ENSCVAG00000002438	opa1	97	89.655	Cyprinodon_variegatus
ENSPNAG00000001917	opa1	100	94.410	ENSDARG00000070801	opa1	100	94.410	Danio_rerio
ENSPNAG00000001917	opa1	93	54.950	FBgn0261276	Opa1	93	54.338	Drosophila_melanogaster
ENSPNAG00000001917	opa1	98	87.541	ENSFHEG00000003616	opa1	96	94.161	Fundulus_heteroclitus
ENSPNAG00000001917	opa1	100	90.702	ENSGACG00000009278	opa1	100	90.909	Gasterosteus_aculeatus
ENSPNAG00000001917	opa1	98	91.983	ENSHBUG00000005897	opa1	100	91.983	Haplochromis_burtoni
ENSPNAG00000001917	opa1	100	89.979	ENSHCOG00000016756	opa1	98	90.186	Hippocampus_comes
ENSPNAG00000001917	opa1	80	94.181	ENSKMAG00000009415	opa1	96	93.691	Kryptolebias_marmoratus
ENSPNAG00000001917	opa1	99	86.052	ENSMMOG00000008891	opa1	98	86.159	Mola_mola
ENSPNAG00000001917	opa1	98	94.407	ENSMALG00000016968	opa1	100	89.959	Monopterus_albus
ENSPNAG00000001917	opa1	98	91.767	ENSNBRG00000020394	opa1	98	92.097	Neolamprologus_brichardi
ENSPNAG00000001917	opa1	98	92.769	ENSPKIG00000003379	opa1	100	85.874	Paramormyrops_kingsleyae
ENSPNAG00000001917	opa1	100	79.652	ENSPKIG00000006473	OPA1	99	79.652	Paramormyrops_kingsleyae
ENSPNAG00000001917	opa1	98	91.987	ENSPNYG00000021747	opa1	98	91.987	Pundamilia_nyererei
ENSPNAG00000001917	opa1	99	83.888	ENSSFOG00015009303	OPA1	97	85.236	Scleropages_formosus
ENSPNAG00000001917	opa1	96	91.657	ENSSMAG00000001797	opa1	96	91.883	Scophthalmus_maximus
ENSPNAG00000001917	opa1	66	92.857	ENSSDUG00000004968	opa1	99	92.857	Seriola_dumerili
ENSPNAG00000001917	opa1	98	94.816	ENSSLDG00000011089	opa1	100	85.784	Seriola_lalandi_dorsalis
ENSPNAG00000001917	opa1	100	91.632	ENSSPAG00000018388	opa1	100	91.839	Stegastes_partitus
ENSPNAG00000001917	opa1	82	87.209	ENSXCOG00000003267	opa1	92	88.859	Xiphophorus_couchianus
ENSPNAG00000001917	opa1	80	94.286	ENSXMAG00000005593	opa1	98	94.286	Xiphophorus_maculatus