EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPNAG00000001958 (Gene tree)
Gene ID
108437583
Gene Symbol
csde1
Alias
fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Pygocentrus_nattereri
Status
putative
Strand
Plus strand
Length
19535 bases
Position
chrKV575524.1:572630-592164
Accession
108437583
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNAP00000005480CSDPF00313.221.7e-8115
ENSPNAP00000005480CSDPF00313.221.7e-8125
ENSPNAP00000005480CSDPF00313.221.7e-8135
ENSPNAP00000005480CSDPF00313.221.7e-8145
ENSPNAP00000005480CSDPF00313.221.7e-8155
ENSPNAP00000005502CSDPF00313.226.9e-8115
ENSPNAP00000005502CSDPF00313.226.9e-8125
ENSPNAP00000005502CSDPF00313.226.9e-8135
ENSPNAP00000005502CSDPF00313.226.9e-8145
ENSPNAP00000005502CSDPF00313.226.9e-8155
ENSPNAP00000026410CSDPF00313.221.1e-8015
ENSPNAP00000026410CSDPF00313.221.1e-8025
ENSPNAP00000026410CSDPF00313.221.1e-8035
ENSPNAP00000026410CSDPF00313.221.1e-8045
ENSPNAP00000026410CSDPF00313.221.1e-8055
ENSPNAP00000005551CSDPF00313.221.5e-8015
ENSPNAP00000005551CSDPF00313.221.5e-8025
ENSPNAP00000005551CSDPF00313.221.5e-8035
ENSPNAP00000005551CSDPF00313.221.5e-8045
ENSPNAP00000005551CSDPF00313.221.5e-8055
ENSPNAP00000005570CSDPF00313.221.5e-8015
ENSPNAP00000005570CSDPF00313.221.5e-8025
ENSPNAP00000005570CSDPF00313.221.5e-8035
ENSPNAP00000005570CSDPF00313.221.5e-8045
ENSPNAP00000005570CSDPF00313.221.5e-8055
ENSPNAP00000005528CSDPF00313.222.5e-8015
ENSPNAP00000005528CSDPF00313.222.5e-8025
ENSPNAP00000005528CSDPF00313.222.5e-8035
ENSPNAP00000005528CSDPF00313.222.5e-8045
ENSPNAP00000005528CSDPF00313.222.5e-8055
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNAT00000005075-7089XM_017714755ENSPNAP00000005570913 (aa)XP_017570244-
ENSPNAT00000005186-6891XM_017714758ENSPNAP00000005502847 (aa)XP_017570247-
ENSPNAT00000005174-7062XM_017714757ENSPNAP00000026410904 (aa)XP_017570246-
ENSPNAT00000005139-7074XM_017714756ENSPNAP00000005528908 (aa)XP_017570245-
ENSPNAT00000005233-2301-ENSPNAP00000005480766 (aa)--
ENSPNAT00000005104-7077-ENSPNAP00000005551909 (aa)--
Gene Model
Click here to download ENSPNAG00000001958's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000001958's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNAG00000001958csde110077.662ENSG00000009307CSDE110085.294Homo_sapiens
ENSPNAG00000001958csde110088.067ENSAPOG00000015538csde110088.067Acanthochromis_polyacanthus
ENSPNAG00000001958csde110076.883ENSAMEG00000017129CSDE19872.947Ailuropoda_melanoleuca
ENSPNAG00000001958csde19085.405ENSACIG00000015175csde19985.405Amphilophus_citrinellus
ENSPNAG00000001958csde110088.197ENSAOCG00000011510csde110088.197Amphiprion_ocellaris
ENSPNAG00000001958csde110088.197ENSAPEG00000007194csde110088.197Amphiprion_percula
ENSPNAG00000001958csde110087.289ENSATEG00000003864csde110087.289Anabas_testudineus
ENSPNAG00000001958csde110078.442ENSAPLG00000008797CSDE110078.442Anas_platyrhynchos
ENSPNAG00000001958csde110076.030ENSACAG00000003120CSDE110078.777Anolis_carolinensis
ENSPNAG00000001958csde19162.191ENSANAG00000028396-9363.265Aotus_nancymaae
ENSPNAG00000001958csde110077.403ENSANAG00000024665CSDE19974.734Aotus_nancymaae
ENSPNAG00000001958csde110085.603ENSACLG00000013296csde110086.625Astatotilapia_calliptera
ENSPNAG00000001958csde110095.306ENSAMXG00000007436csde110095.306Astyanax_mexicanus
ENSPNAG00000001958csde110077.273ENSBTAG00000000678CSDE110077.273Bos_taurus
ENSPNAG00000001958csde110077.403ENSCJAG00000012565CSDE19974.852Callithrix_jacchus
ENSPNAG00000001958csde19878.515ENSCAFG00000009618CSDE19478.515Canis_familiaris
ENSPNAG00000001958csde110077.792ENSCAFG00020000481CSDE110077.792Canis_lupus_dingo
ENSPNAG00000001958csde110077.273ENSCHIG00000017250CSDE110077.273Capra_hircus
ENSPNAG00000001958csde110077.532ENSTSYG00000003747CSDE110077.532Carlito_syrichta
ENSPNAG00000001958csde19577.914ENSCAPG00000015128CSDE110077.914Cavia_aperea
ENSPNAG00000001958csde110071.970ENSCPOG00000040388CSDE110073.091Cavia_porcellus
ENSPNAG00000001958csde19755.432ENSCCAG00000030878-9155.432Cebus_capucinus
ENSPNAG00000001958csde110077.403ENSCCAG00000036794CSDE110077.154Cebus_capucinus
ENSPNAG00000001958csde19556.974ENSCCAG00000033677-9956.974Cebus_capucinus
ENSPNAG00000001958csde110077.662ENSCATG00000036962CSDE19777.662Cercocebus_atys
ENSPNAG00000001958csde110077.662ENSCLAG00000006618CSDE110077.662Chinchilla_lanigera
ENSPNAG00000001958csde110074.657ENSCSAG00000001658CSDE19974.970Chlorocebus_sabaeus
ENSPNAG00000001958csde18982.243ENSCHOG00000000918CSDE18181.155Choloepus_hoffmanni
ENSPNAG00000001958csde110078.701ENSCPBG00000016547CSDE110078.701Chrysemys_picta_bellii
ENSPNAG00000001958csde19743.399ENSCING00000014465-9842.924Ciona_intestinalis
ENSPNAG00000001958csde19642.672ENSCSAVG00000008100-9943.313Ciona_savignyi
ENSPNAG00000001958csde110077.662ENSCANG00000035096CSDE19777.662Colobus_angolensis_palliatus
ENSPNAG00000001958csde18779.630ENSCANG00000031069-9479.630Colobus_angolensis_palliatus
ENSPNAG00000001958csde110062.857ENSCGRG00001014011-10062.857Cricetulus_griseus_chok1gshd
ENSPNAG00000001958csde110076.883ENSCGRG00001016833-10076.883Cricetulus_griseus_chok1gshd
ENSPNAG00000001958csde19773.171ENSCGRG00000002225-10073.171Cricetulus_griseus_crigri
ENSPNAG00000001958csde110073.478ENSCGRG00000005831-10073.478Cricetulus_griseus_crigri
ENSPNAG00000001958csde110086.381ENSCSEG00000002620csde110086.381Cynoglossus_semilaevis
ENSPNAG00000001958csde110086.252ENSCVAG00000001344csde110086.252Cyprinodon_variegatus
ENSPNAG00000001958csde110085.357ENSDARG00000074758csde110088.861Danio_rerio
ENSPNAG00000001958csde110077.821ENSDNOG00000010287-9377.821Dasypus_novemcinctus
ENSPNAG00000001958csde16054.198ENSDNOG00000034464-9959.836Dasypus_novemcinctus
ENSPNAG00000001958csde110074.032ENSDORG00000011609Csde110076.654Dipodomys_ordii
ENSPNAG00000001958csde19647.862FBgn0263352Unr8348.682Drosophila_melanogaster
ENSPNAG00000001958csde19070.032ENSETEG00000006280-9970.032Echinops_telfairi
ENSPNAG00000001958csde17953.871ENSETEG00000007109-9953.871Echinops_telfairi
ENSPNAG00000001958csde18881.967ENSETEG00000002491-8671.098Echinops_telfairi
ENSPNAG00000001958csde19960.338ENSETEG00000013678-9960.338Echinops_telfairi
ENSPNAG00000001958csde19954.131ENSEBUG00000008647csde19954.241Eptatretus_burgeri
ENSPNAG00000001958csde110077.922ENSEASG00005006284CSDE110077.528Equus_asinus_asinus
ENSPNAG00000001958csde110077.922ENSECAG00000020885CSDE110077.528Equus_caballus
ENSPNAG00000001958csde19282.188ENSEEUG00000006286CSDE16882.188Erinaceus_europaeus
ENSPNAG00000001958csde110086.528ENSELUG00000015507csde110086.528Esox_lucius
ENSPNAG00000001958csde110077.792ENSFCAG00000029266CSDE110077.792Felis_catus
ENSPNAG00000001958csde110075.156ENSFALG00000003407CSDE110077.903Ficedula_albicollis
ENSPNAG00000001958csde110074.032ENSFDAG00000007882CSDE110076.654Fukomys_damarensis
ENSPNAG00000001958csde19887.054ENSFHEG00000010799csde110086.250Fundulus_heteroclitus
ENSPNAG00000001958csde19983.730ENSGMOG00000012731csde110086.984Gadus_morhua
ENSPNAG00000001958csde19875.827ENSGALG00000002139CSDE19878.626Gallus_gallus
ENSPNAG00000001958csde19387.062ENSGAFG00000005241csde19587.062Gambusia_affinis
ENSPNAG00000001958csde19984.230ENSGACG00000004544csde110087.610Gasterosteus_aculeatus
ENSPNAG00000001958csde110078.571ENSGAGG00000017685CSDE110078.277Gopherus_agassizii
ENSPNAG00000001958csde110077.662ENSGGOG00000002164CSDE110077.662Gorilla_gorilla
ENSPNAG00000001958csde110086.016ENSHBUG00000020315csde110086.252Haplochromis_burtoni
ENSPNAG00000001958csde19767.958ENSHGLG00000008555-10067.958Heterocephalus_glaber_female
ENSPNAG00000001958csde19765.632ENSHGLG00000010039-10065.632Heterocephalus_glaber_female
ENSPNAG00000001958csde19960.250ENSHGLG00000000650-9962.750Heterocephalus_glaber_female
ENSPNAG00000001958csde110069.740ENSHGLG00000003829-10069.740Heterocephalus_glaber_female
ENSPNAG00000001958csde110069.961ENSHGLG00000009620-10070.221Heterocephalus_glaber_female
ENSPNAG00000001958csde19967.578ENSHGLG00000007471-9967.578Heterocephalus_glaber_female
ENSPNAG00000001958csde110063.899ENSHGLG00000019549-10065.457Heterocephalus_glaber_female
ENSPNAG00000001958csde110065.455ENSHGLG00100012072-10065.455Heterocephalus_glaber_male
ENSPNAG00000001958csde110077.273ENSHGLG00100019438-10077.273Heterocephalus_glaber_male
ENSPNAG00000001958csde19967.448ENSHGLG00100007287-9967.448Heterocephalus_glaber_male
ENSPNAG00000001958csde19765.410ENSHGLG00100006910-10065.410Heterocephalus_glaber_male
ENSPNAG00000001958csde110064.202ENSHGLG00100001846-10064.202Heterocephalus_glaber_male
ENSPNAG00000001958csde19364.722ENSHGLG00100004195-10064.722Heterocephalus_glaber_male
ENSPNAG00000001958csde19963.342ENSHGLG00100002245-9965.835Heterocephalus_glaber_male
ENSPNAG00000001958csde19760.889ENSHGLG00100004833-10060.889Heterocephalus_glaber_male
ENSPNAG00000001958csde110085.992ENSHCOG00000004158csde110085.992Hippocampus_comes
ENSPNAG00000001958csde110090.222ENSIPUG00000000355csde110090.222Ictalurus_punctatus
ENSPNAG00000001958csde110063.312ENSSTOG00000030994-10063.312Ictidomys_tridecemlineatus
ENSPNAG00000001958csde19066.461ENSSTOG00000032722-9866.731Ictidomys_tridecemlineatus
ENSPNAG00000001958csde110074.157ENSJJAG00000019571Csde110076.779Jaculus_jaculus
ENSPNAG00000001958csde110082.711ENSKMAG00000005685csde110086.015Kryptolebias_marmoratus
ENSPNAG00000001958csde110087.289ENSLBEG00000014770csde110087.289Labrus_bergylta
ENSPNAG00000001958csde110074.106ENSLACG00000018452CSDE19974.471Latimeria_chalumnae
ENSPNAG00000001958csde110083.095ENSLOCG00000010413csde110083.509Lepisosteus_oculatus
ENSPNAG00000001958csde110077.013ENSLAFG00000007150CSDE19677.013Loxodonta_africana
ENSPNAG00000001958csde110077.662ENSMFAG00000003674CSDE110077.662Macaca_fascicularis
ENSPNAG00000001958csde110077.662ENSMMUG00000001974CSDE110077.662Macaca_mulatta
ENSPNAG00000001958csde110077.662ENSMNEG00000045247CSDE19777.662Macaca_nemestrina
ENSPNAG00000001958csde110077.403ENSMLEG00000038673CSDE19974.734Mandrillus_leucophaeus
ENSPNAG00000001958csde110087.678ENSMAMG00000008821csde110087.678Mastacembelus_armatus
ENSPNAG00000001958csde110085.603ENSMZEG00005021675csde110086.252Maylandia_zebra
ENSPNAG00000001958csde110078.210ENSMGAG00000016381CSDE110078.210Meleagris_gallopavo
ENSPNAG00000001958csde110073.908ENSMAUG00000014031Csde110076.529Mesocricetus_auratus
ENSPNAG00000001958csde110077.143ENSMICG00000002050CSDE19875.542Microcebus_murinus
ENSPNAG00000001958csde110077.013ENSMOCG00000018960Csde110077.013Microtus_ochrogaster
ENSPNAG00000001958csde110088.197ENSMMOG00000015075csde110088.197Mola_mola
ENSPNAG00000001958csde110078.238ENSMODG00000004685CSDE110078.652Monodelphis_domestica
ENSPNAG00000001958csde110087.549ENSMALG00000007132csde110087.549Monopterus_albus
ENSPNAG00000001958csde110077.013MGP_CAROLIEiJ_G0025444Csde110084.768Mus_caroli
ENSPNAG00000001958csde110077.013ENSMUSG00000068823Csde110084.768Mus_musculus
ENSPNAG00000001958csde110077.013MGP_PahariEiJ_G0026888Csde110084.768Mus_pahari
ENSPNAG00000001958csde110077.013MGP_SPRETEiJ_G0026394Csde110084.768Mus_spretus
ENSPNAG00000001958csde19875.414ENSMPUG00000005753CSDE19978.089Mustela_putorius_furo
ENSPNAG00000001958csde110077.821ENSMLUG00000005681CSDE19477.821Myotis_lucifugus
ENSPNAG00000001958csde110073.783ENSNGAG00000021929Csde110076.404Nannospalax_galili
ENSPNAG00000001958csde19752.772ENSNGAG00000012599-10052.772Nannospalax_galili
ENSPNAG00000001958csde110085.603ENSNBRG00000020808csde110086.252Neolamprologus_brichardi
ENSPNAG00000001958csde110077.532ENSNLEG00000004842CSDE19777.532Nomascus_leucogenys
ENSPNAG00000001958csde19684.466ENSMEUG00000002677CSDE19584.466Notamacropus_eugenii
ENSPNAG00000001958csde19483.178ENSOPRG00000005002CSDE18074.242Ochotona_princeps
ENSPNAG00000001958csde19752.097ENSODEG00000005979-9852.097Octodon_degus
ENSPNAG00000001958csde110074.157ENSODEG00000007383-10076.779Octodon_degus
ENSPNAG00000001958csde110080.586ENSONIG00000009309csde110084.615Oreochromis_niloticus
ENSPNAG00000001958csde110076.541ENSOANG00000003346-8180.308Ornithorhynchus_anatinus
ENSPNAG00000001958csde110077.532ENSOCUG00000016438CSDE19875.447Oryctolagus_cuniculus
ENSPNAG00000001958csde110084.935ENSORLG00000000707csde110084.935Oryzias_latipes
ENSPNAG00000001958csde110084.701ENSORLG00020005148csde110084.701Oryzias_latipes_hni
ENSPNAG00000001958csde110084.935ENSORLG00015019415csde110084.935Oryzias_latipes_hsok
ENSPNAG00000001958csde110084.935ENSOMEG00000015656csde110085.584Oryzias_melastigma
ENSPNAG00000001958csde110077.662ENSOGAG00000012127CSDE19972.663Otolemur_garnettii
ENSPNAG00000001958csde110077.403ENSOARG00000020034CSDE19873.430Ovis_aries
ENSPNAG00000001958csde110077.662ENSPPAG00000025861CSDE110077.662Pan_paniscus
ENSPNAG00000001958csde110077.792ENSPPRG00000006747CSDE19876.265Panthera_pardus
ENSPNAG00000001958csde110077.792ENSPTIG00000015468CSDE110077.403Panthera_tigris_altaica
ENSPNAG00000001958csde110077.662ENSPTRG00000033721CSDE110077.278Pan_troglodytes
ENSPNAG00000001958csde110077.662ENSPANG00000018873CSDE110077.662Papio_anubis
ENSPNAG00000001958csde110085.844ENSPKIG00000009459csde110085.844Paramormyrops_kingsleyae
ENSPNAG00000001958csde18981.758ENSPSIG00000003823CSDE19681.798Pelodiscus_sinensis
ENSPNAG00000001958csde110085.751ENSPMGG00000000772csde110085.751Periophthalmus_magnuspinnatus
ENSPNAG00000001958csde110074.157ENSPEMG00000020357-10076.779Peromyscus_maniculatus_bairdii
ENSPNAG00000001958csde110075.905ENSPCIG00000022587CSDE110078.527Phascolarctos_cinereus
ENSPNAG00000001958csde19785.891ENSPFOG00000012664csde110086.512Poecilia_formosa
ENSPNAG00000001958csde19582.083ENSPLAG00000017680csde19382.083Poecilia_latipinna
ENSPNAG00000001958csde19582.083ENSPMEG00000005094csde19582.083Poecilia_mexicana
ENSPNAG00000001958csde110086.486ENSPREG00000011631csde110085.899Poecilia_reticulata
ENSPNAG00000001958csde110074.532ENSPPYG00000000996CSDE110077.154Pongo_abelii
ENSPNAG00000001958csde19683.178ENSPCAG00000014368CSDE19577.129Procavia_capensis
ENSPNAG00000001958csde18870.741ENSPCOG00000008223-9270.741Propithecus_coquereli
ENSPNAG00000001958csde110077.792ENSPCOG00000017893CSDE110077.792Propithecus_coquereli
ENSPNAG00000001958csde19277.606ENSPVAG00000008225CSDE18777.606Pteropus_vampyrus
ENSPNAG00000001958csde110085.603ENSPNYG00000013745csde110086.252Pundamilia_nyererei
ENSPNAG00000001958csde110073.908ENSRNOG00000061058Csde110076.529Rattus_norvegicus
ENSPNAG00000001958csde110073.281ENSRBIG00000038966-9970.602Rhinopithecus_bieti
ENSPNAG00000001958csde110074.578ENSRBIG00000038088-10074.578Rhinopithecus_bieti
ENSPNAG00000001958csde110077.662ENSRROG00000043101CSDE19777.662Rhinopithecus_roxellana
ENSPNAG00000001958csde110077.403ENSSBOG00000035592CSDE19974.852Saimiri_boliviensis_boliviensis
ENSPNAG00000001958csde110078.831ENSSHAG00000009831CSDE110078.831Sarcophilus_harrisii
ENSPNAG00000001958csde110087.755ENSSFOG00015007498csde110084.932Scleropages_formosus
ENSPNAG00000001958csde110087.160ENSSMAG00000007203csde110087.160Scophthalmus_maximus
ENSPNAG00000001958csde110087.808ENSSDUG00000015380csde110087.808Seriola_dumerili
ENSPNAG00000001958csde110087.808ENSSLDG00000008819csde110088.000Seriola_lalandi_dorsalis
ENSPNAG00000001958csde110077.143ENSSARG00000000738CSDE19477.143Sorex_araneus
ENSPNAG00000001958csde110078.961ENSSPUG00000008714CSDE110078.961Sphenodon_punctatus
ENSPNAG00000001958csde110088.498ENSSPAG00000000716csde110088.380Stegastes_partitus
ENSPNAG00000001958csde110078.052ENSSSCG00000006752CSDE110078.052Sus_scrofa
ENSPNAG00000001958csde110074.471ENSTGUG00000000972CSDE110077.210Taeniopygia_guttata
ENSPNAG00000001958csde110082.597ENSTRUG00000007996csde110082.597Takifugu_rubripes
ENSPNAG00000001958csde18891.954ENSTNIG00000010878csde110091.954Tetraodon_nigroviridis
ENSPNAG00000001958csde17680.368ENSTBEG00000011880-6677.215Tupaia_belangeri
ENSPNAG00000001958csde110077.143ENSTTRG00000015583CSDE19477.143Tursiops_truncatus
ENSPNAG00000001958csde19082.468ENSUAMG00000021779-9982.468Ursus_americanus
ENSPNAG00000001958csde19674.359ENSUAMG00000024289-9974.359Ursus_americanus
ENSPNAG00000001958csde110071.558ENSUMAG00000009720-9771.558Ursus_maritimus
ENSPNAG00000001958csde19370.833ENSUMAG00000011714-9972.577Ursus_maritimus
ENSPNAG00000001958csde110081.206ENSVPAG00000000749CSDE17981.206Vicugna_pacos
ENSPNAG00000001958csde19373.799ENSVVUG00000009890CSDE19476.856Vulpes_vulpes
ENSPNAG00000001958csde110075.622ENSXETG00000021448csde110078.358Xenopus_tropicalis
ENSPNAG00000001958csde19390.022ENSXCOG00000000035csde18990.022Xiphophorus_couchianus
ENSPNAG00000001958csde110086.604ENSXMAG00000009080csde110086.016Xiphophorus_maculatus

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