EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPNAG00000002218 (Gene tree)
Gene ID
108431395
Gene Symbol
-
Alias
RAB5CL|RABL
Full Name
ras-related protein Rab-5C-like
Gene Type
protein_coding
Species
Pygocentrus_nattereri
Status
putative
Strand
Minus strand
Length
6220 bases
Position
chrKV575387.1:555048-561267
Accession
108431395
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNAP00000026966MMR_HSR1PF01926.230.0001711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNAT00000003770-1529XM_017704500ENSPNAP00000026966213 (aa)XP_017559989UPI00081496CA
Gene Model
Click here to download ENSPNAG00000002218's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000002218's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPNAG00000002218-7436.250ENSPNAG00000021994rab366136.250
ENSPNAG00000002218-9233.990ENSPNAG00000017938RAB9A8933.990
ENSPNAG00000002218-7746.626ENSPNAG00000029574zgc:1719277846.626
ENSPNAG00000002218-7637.195ENSPNAG00000013589rab39bb7737.195
ENSPNAG00000002218-7836.264ENSPNAG00000029115rab33ba8036.264
ENSPNAG00000002218-5633.065ENSPNAG00000007931arl8ba6333.065
ENSPNAG00000002218-9239.394ENSPNAG00000011548rab18a9739.394
ENSPNAG00000002218-7938.690ENSPNAG00000003227rab3c7738.690
ENSPNAG00000002218-7639.157ENSPNAG00000022929rab33a5439.157
ENSPNAG00000002218-7731.214ENSPNAG00000028497si:cabz01085950.18331.214
ENSPNAG00000002218-8141.860ENSPNAG00000018986si:dkey-16l2.167942.515
ENSPNAG00000002218-7936.364ENSPNAG00000007277RAB9A8136.571
ENSPNAG00000002218-7733.133ENSPNAG00000028629kras8832.164
ENSPNAG00000002218-7336.774ENSPNAG00000024254rabl26836.774
ENSPNAG00000002218-9240.594ENSPNAG00000010760rab309540.796
ENSPNAG00000002218-9242.927ENSPNAG00000000694rab25a8247.305
ENSPNAG00000002218-9241.748ENSPNAG00000006431-7547.239
ENSPNAG00000002218-9244.615ENSPNAG00000012540-9644.615
ENSPNAG00000002218-9985.446ENSPNAG00000009496rab5ab9784.507
ENSPNAG00000002218-8841.489ENSPNAG00000014363-7643.293
ENSPNAG00000002218-6237.778ENSPNAG00000008867rab205437.778
ENSPNAG00000002218-7431.875ENSPNAG00000003179rab34a6231.875
ENSPNAG00000002218-8133.146ENSPNAG00000000584hrasb8732.335
ENSPNAG00000002218-7747.239ENSPNAG00000014863rab11a7647.239
ENSPNAG00000002218-7842.442ENSPNAG00000015164-9639.000
ENSPNAG00000002218-8252.000ENSPNAG00000015161rab22a8353.988
ENSPNAG00000002218-9439.320ENSPNAG00000020583zgc:1009189939.320
ENSPNAG00000002218-7637.195ENSPNAG00000013897rab39ba7737.195
ENSPNAG00000002218-9639.512ENSPNAG00000010157rab6bb9939.512
ENSPNAG00000002218-9439.130ENSPNAG00000016600-9939.130
ENSPNAG00000002218-9244.103ENSPNAG00000013863rab1ab8844.103
ENSPNAG00000002218-6935.135ENSPNAG00000024728rab237336.184
ENSPNAG00000002218-7942.857ENSPNAG00000011193rab2a7644.099
ENSPNAG00000002218-9244.898ENSPNAG00000013004rab1ba9643.878
ENSPNAG00000002218-5532.787ENSPNAG00000017354arl8bb6232.787
ENSPNAG00000002218-9988.128ENSPNAG00000028138rab5c9988.128
ENSPNAG00000002218-7738.037ENSPNAG00000015810RAB158038.037
ENSPNAG00000002218-9986.321ENSPNAG00000023223rab5aa9784.434
ENSPNAG00000002218-7839.535ENSPNAG00000015031rab127039.535
ENSPNAG00000002218-9342.000ENSPNAG00000002404rab18b8044.848
ENSPNAG00000002218-7636.585ENSPNAG00000016567rab42a7736.585
ENSPNAG00000002218-8239.665ENSPNAG00000017856zgc:1015597440.351
ENSPNAG00000002218-8443.258ENSPNAG00000021737rab418443.258
ENSPNAG00000002218-7730.409ENSPNAG00000017466rab38b8130.682
ENSPNAG00000002218-9242.647ENSPNAG00000029085rab11al7349.045
ENSPNAG00000002218-8045.029ENSPNAG00000005519-8245.029
ENSPNAG00000002218-8140.782ENSPNAG00000021675-8340.782
ENSPNAG00000002218-9235.385ENSPNAG00000014046-8139.877
ENSPNAG00000002218-7832.335ENSPNAG00000014085hrasa8732.335
ENSPNAG00000002218-9243.781ENSPNAG00000006569rab25b8047.929
ENSPNAG00000002218-6930.872ENSPNAG00000015040rab34b6731.250
ENSPNAG00000002218-7833.333ENSPNAG00000004728rheb9232.941
ENSPNAG00000002218-7642.236ENSPNAG00000004189rab138542.236
ENSPNAG00000002218-7835.429ENSPNAG00000018132rab9b7635.429
ENSPNAG00000002218-9440.796ENSPNAG00000028379rab6ba9740.796
ENSPNAG00000002218-8137.430ENSPNAG00000014146-7936.905
ENSPNAG00000002218-9241.748ENSPNAG00000020475rab11ba7547.239
ENSPNAG00000002218-7540.252ENSPNAG00000011215rab157540.252
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNAG00000002218-9989.151ENSG00000108774RAB5C9596.610Homo_sapiens
ENSPNAG00000002218-9989.048ENSAPOG00000016864rab5c9589.474Acanthochromis_polyacanthus
ENSPNAG00000002218-9988.679ENSAMEG00000006003RAB5C9786.792Ailuropoda_melanoleuca
ENSPNAG00000002218-9989.048ENSACIG00000010896rab5c9789.474Amphilophus_citrinellus
ENSPNAG00000002218-9989.048ENSAOCG00000016614rab5c9589.474Amphiprion_ocellaris
ENSPNAG00000002218-9989.048ENSAPEG00000017868-9689.474Amphiprion_percula
ENSPNAG00000002218-9989.573ENSATEG00000001937rab5c9690.000Anabas_testudineus
ENSPNAG00000002218-9391.457ENSANAG00000025390RAB5C8994.505Aotus_nancymaae
ENSPNAG00000002218-9888.517ENSACLG00000002706rab5c9588.517Astatotilapia_calliptera
ENSPNAG00000002218-9988.679ENSACLG00000008615-9588.679Astatotilapia_calliptera
ENSPNAG00000002218-9988.128ENSAMXG00000043717rab5c9988.128Astyanax_mexicanus
ENSPNAG00000002218-9997.156ENSAMXG00000037267-10097.156Astyanax_mexicanus
ENSPNAG00000002218-9988.679ENSBTAG00000006982RAB5C9786.321Bos_taurus
ENSPNAG00000002218-9874.163WBGene00004268rab-59574.038Caenorhabditis_elegans
ENSPNAG00000002218-9988.679ENSCAFG00000015629RAB5C9786.792Canis_familiaris
ENSPNAG00000002218-9988.679ENSCAFG00020013537RAB5C9786.792Canis_lupus_dingo
ENSPNAG00000002218-9988.679ENSCHIG00000012960RAB5C9786.321Capra_hircus
ENSPNAG00000002218-9989.151ENSTSYG00000030531RAB5C9786.792Carlito_syrichta
ENSPNAG00000002218-9989.151ENSCCAG00000025940RAB5C9786.792Cebus_capucinus
ENSPNAG00000002218-9989.151ENSCATG00000040873RAB5C9786.792Cercocebus_atys
ENSPNAG00000002218-9990.000ENSCLAG00000016650RAB5C9687.619Chinchilla_lanigera
ENSPNAG00000002218-8194.767ENSCHOG00000009886RAB5C9794.767Choloepus_hoffmanni
ENSPNAG00000002218-9975.117ENSCING00000003340-9775.117Ciona_intestinalis
ENSPNAG00000002218-9974.886ENSCSAVG00000000613-9583.226Ciona_savignyi
ENSPNAG00000002218-9989.623ENSCGRG00001014226Rab5c9787.264Cricetulus_griseus_chok1gshd
ENSPNAG00000002218-9989.623ENSCGRG00000007534Rab5c9787.264Cricetulus_griseus_crigri
ENSPNAG00000002218-9889.952ENSCSEG00000017024rab5c9589.952Cynoglossus_semilaevis
ENSPNAG00000002218-9988.571ENSCVAG00000009550rab5c9588.995Cyprinodon_variegatus
ENSPNAG00000002218-9988.679ENSDNOG00000038853RAB5C9786.321Dasypus_novemcinctus
ENSPNAG00000002218-9989.573ENSDORG00000006819Rab5c9687.619Dipodomys_ordii
ENSPNAG00000002218-9973.333FBgn0014010Rab58281.667Drosophila_melanogaster
ENSPNAG00000002218-8883.511ENSEBUG00000014794rab5c8487.079Eptatretus_burgeri
ENSPNAG00000002218-9988.679ENSEASG00005009281RAB5C9786.792Equus_asinus_asinus
ENSPNAG00000002218-9989.151ENSECAG00000025054RAB5C9786.792Equus_caballus
ENSPNAG00000002218-9988.679ENSEEUG00000002790RAB5C9786.321Erinaceus_europaeus
ENSPNAG00000002218-9887.081ENSELUG00000010439-9587.081Esox_lucius
ENSPNAG00000002218-9890.385ENSELUG00000018516rab5c9690.385Esox_lucius
ENSPNAG00000002218-9988.679ENSFCAG00000002148RAB5C9786.321Felis_catus
ENSPNAG00000002218-9988.679ENSFDAG00000021541RAB5C9786.792Fukomys_damarensis
ENSPNAG00000002218-9988.152ENSFHEG00000015268-9688.152Fundulus_heteroclitus
ENSPNAG00000002218-9889.474ENSFHEG00000012117rab5c9589.474Fundulus_heteroclitus
ENSPNAG00000002218-8184.971ENSGMOG00000001876-10084.971Gadus_morhua
ENSPNAG00000002218-9889.474ENSGMOG00000015096rab5c9589.474Gadus_morhua
ENSPNAG00000002218-9889.474ENSGAFG00000000884rab5c9589.474Gambusia_affinis
ENSPNAG00000002218-9491.500ENSGAFG00000003642-9687.793Gambusia_affinis
ENSPNAG00000002218-9888.038ENSGACG00000008659rab5c9588.038Gasterosteus_aculeatus
ENSPNAG00000002218-9989.151ENSGGOG00000005472RAB5C9786.792Gorilla_gorilla
ENSPNAG00000002218-9888.517ENSHBUG00000002014rab5c9588.517Haplochromis_burtoni
ENSPNAG00000002218-9988.679ENSHBUG00000006823-9588.679Haplochromis_burtoni
ENSPNAG00000002218-9987.264ENSHGLG00000012067RAB5C9785.377Heterocephalus_glaber_female
ENSPNAG00000002218-9983.412ENSHCOG00000020238-9682.160Hippocampus_comes
ENSPNAG00000002218-9987.215ENSHCOG00000004662rab5c9787.215Hippocampus_comes
ENSPNAG00000002218-9986.792ENSIPUG00000020082rab5c9886.792Ictalurus_punctatus
ENSPNAG00000002218-9988.679ENSSTOG00000006620RAB5C9787.264Ictidomys_tridecemlineatus
ENSPNAG00000002218-9989.151ENSJJAG00000021181Rab5c9786.792Jaculus_jaculus
ENSPNAG00000002218-9889.474ENSKMAG00000020038rab5c9589.474Kryptolebias_marmoratus
ENSPNAG00000002218-9887.560ENSKMAG00000017417-9587.560Kryptolebias_marmoratus
ENSPNAG00000002218-9988.571ENSLBEG00000010408-9489.423Labrus_bergylta
ENSPNAG00000002218-9890.909ENSLBEG00000004128rab5c9590.909Labrus_bergylta
ENSPNAG00000002218-9888.995ENSLOCG00000012566rab5c9687.500Lepisosteus_oculatus
ENSPNAG00000002218-9989.151ENSMFAG00000039627RAB5C9886.792Macaca_fascicularis
ENSPNAG00000002218-9989.151ENSMNEG00000000355RAB5C9786.792Macaca_nemestrina
ENSPNAG00000002218-9990.000ENSMAMG00000022322rab5c9590.431Mastacembelus_armatus
ENSPNAG00000002218-9888.038ENSMAMG00000016207-9588.038Mastacembelus_armatus
ENSPNAG00000002218-9888.517ENSMZEG00005022735rab5c9588.517Maylandia_zebra
ENSPNAG00000002218-9988.679ENSMZEG00005021090-9588.679Maylandia_zebra
ENSPNAG00000002218-9989.623ENSMAUG00000015005Rab5c9787.264Mesocricetus_auratus
ENSPNAG00000002218-9989.151ENSMICG00000041608RAB5C9786.792Microcebus_murinus
ENSPNAG00000002218-9989.623ENSMOCG00000018531-9787.264Microtus_ochrogaster
ENSPNAG00000002218-9988.571ENSMMOG00000020621rab5c9588.571Mola_mola
ENSPNAG00000002218-9884.689ENSMALG00000006052rab5c9584.689Monopterus_albus
ENSPNAG00000002218-9887.500ENSMALG00000022348-9587.500Monopterus_albus
ENSPNAG00000002218-9989.623MGP_CAROLIEiJ_G0017184Rab5c9787.264Mus_caroli
ENSPNAG00000002218-9989.623ENSMUSG00000019173Rab5c9787.264Mus_musculus
ENSPNAG00000002218-9989.623MGP_PahariEiJ_G0018314Rab5c9787.264Mus_pahari
ENSPNAG00000002218-9989.623MGP_SPRETEiJ_G0018027Rab5c9787.264Mus_spretus
ENSPNAG00000002218-9988.679ENSMPUG00000010554RAB5C9786.792Mustela_putorius_furo
ENSPNAG00000002218-9988.626ENSNGAG00000010286Rab5c9686.667Nannospalax_galili
ENSPNAG00000002218-9989.048ENSNBRG00000018165rab5c9589.474Neolamprologus_brichardi
ENSPNAG00000002218-9988.679ENSNBRG00000016922-9588.679Neolamprologus_brichardi
ENSPNAG00000002218-8188.372ENSOPRG00000008255RAB5C9788.372Ochotona_princeps
ENSPNAG00000002218-9989.524ENSODEG00000017920RAB5C9687.143Octodon_degus
ENSPNAG00000002218-9889.474ENSONIG00000001113rab5c9589.474Oreochromis_niloticus
ENSPNAG00000002218-9988.152ENSORLG00000003882rab5c9688.571Oryzias_latipes
ENSPNAG00000002218-9988.095ENSORLG00020008388rab5c9688.095Oryzias_latipes_hni
ENSPNAG00000002218-9988.152ENSORLG00015021900rab5c9688.571Oryzias_latipes_hsok
ENSPNAG00000002218-9988.152ENSOMEG00000023078rab5c9688.571Oryzias_melastigma
ENSPNAG00000002218-9989.100ENSOGAG00000009456RAB5C9687.143Otolemur_garnettii
ENSPNAG00000002218-9988.679ENSOARG00000018768RAB5C9786.321Ovis_aries
ENSPNAG00000002218-9989.151ENSPPAG00000037206RAB5C9786.792Pan_paniscus
ENSPNAG00000002218-9988.679ENSPPRG00000005745RAB5C9786.321Panthera_pardus
ENSPNAG00000002218-9988.679ENSPTIG00000008177RAB5C9786.321Panthera_tigris_altaica
ENSPNAG00000002218-9989.151ENSPTRG00000009194RAB5C9886.792Pan_troglodytes
ENSPNAG00000002218-9887.019ENSPKIG00000001237-9686.058Paramormyrops_kingsleyae
ENSPNAG00000002218-9887.081ENSPKIG00000020112-9687.500Paramormyrops_kingsleyae
ENSPNAG00000002218-9890.431ENSPMGG00000010792rab5c9690.431Periophthalmus_magnuspinnatus
ENSPNAG00000002218-9989.623ENSPEMG00000017971Rab5c9787.264Peromyscus_maniculatus_bairdii
ENSPNAG00000002218-9976.887ENSPMAG00000001399rab5c9776.777Petromyzon_marinus
ENSPNAG00000002218-9979.048ENSPMAG00000007867rab5c8686.264Petromyzon_marinus
ENSPNAG00000002218-8683.598ENSPMAG00000000008rab5c8484.783Petromyzon_marinus
ENSPNAG00000002218-10088.732ENSPCIG00000020225-9886.385Phascolarctos_cinereus
ENSPNAG00000002218-9988.152ENSPLAG00000016333-9788.152Poecilia_latipinna
ENSPNAG00000002218-9889.474ENSPLAG00000004790rab5c9589.474Poecilia_latipinna
ENSPNAG00000002218-9889.474ENSPMEG00000011336rab5c9589.474Poecilia_mexicana
ENSPNAG00000002218-9591.089ENSPMEG00000012614-9687.850Poecilia_mexicana
ENSPNAG00000002218-9889.474ENSPREG00000010146rab5c9589.474Poecilia_reticulata
ENSPNAG00000002218-8591.758ENSPREG00000022167-8694.643Poecilia_reticulata
ENSPNAG00000002218-9989.151ENSPPYG00000008398RAB5C9786.792Pongo_abelii
ENSPNAG00000002218-9987.264ENSPCAG00000016412RAB5C9784.906Procavia_capensis
ENSPNAG00000002218-9988.208ENSPCOG00000026327RAB5C9786.321Propithecus_coquereli
ENSPNAG00000002218-9989.151ENSPVAG00000003867RAB5C9786.792Pteropus_vampyrus
ENSPNAG00000002218-9988.679ENSPNYG00000015851-9588.679Pundamilia_nyererei
ENSPNAG00000002218-9888.517ENSPNYG00000010615rab5c9588.517Pundamilia_nyererei
ENSPNAG00000002218-9989.623ENSRNOG00000018568Rab5c9787.264Rattus_norvegicus
ENSPNAG00000002218-9989.151ENSRBIG00000031376RAB5C9786.792Rhinopithecus_bieti
ENSPNAG00000002218-9989.151ENSRROG00000032895RAB5C9786.792Rhinopithecus_roxellana
ENSPNAG00000002218-9989.151ENSSBOG00000032552-9786.792Saimiri_boliviensis_boliviensis
ENSPNAG00000002218-9989.151ENSSHAG00000005267-9786.792Sarcophilus_harrisii
ENSPNAG00000002218-9884.615ENSSFOG00015009988-9584.615Scleropages_formosus
ENSPNAG00000002218-9491.542ENSSMAG00000007323rab5c9590.431Scophthalmus_maximus
ENSPNAG00000002218-9889.952ENSSDUG00000023008rab5c9589.952Seriola_dumerili
ENSPNAG00000002218-9888.995ENSSLDG00000017771rab5c9588.995Seriola_lalandi_dorsalis
ENSPNAG00000002218-9988.679ENSSPUG00000012950-9786.792Sphenodon_punctatus
ENSPNAG00000002218-9890.431ENSSPAG00000006436rab5c9590.431Stegastes_partitus
ENSPNAG00000002218-9988.679ENSSSCG00000032467RAB5C9786.321Sus_scrofa
ENSPNAG00000002218-9889.474ENSTRUG00000015590rab5c9589.474Takifugu_rubripes
ENSPNAG00000002218-9889.952ENSTNIG00000011711rab5c9589.952Tetraodon_nigroviridis
ENSPNAG00000002218-9989.151ENSTBEG00000007092RAB5C9786.792Tupaia_belangeri
ENSPNAG00000002218-9988.208ENSTTRG00000006673RAB5C9786.321Tursiops_truncatus
ENSPNAG00000002218-9988.679ENSUAMG00000024343RAB5C9786.792Ursus_americanus
ENSPNAG00000002218-9988.679ENSUMAG00000023270RAB5C9786.792Ursus_maritimus
ENSPNAG00000002218-9989.048ENSXCOG00000016788rab5c9988.679Xiphophorus_couchianus
ENSPNAG00000002218-9591.089ENSXCOG00000006300-9687.442Xiphophorus_couchianus
ENSPNAG00000002218-9989.524ENSXMAG00000022179-9589.524Xiphophorus_maculatus
ENSPNAG00000002218-9889.474ENSXMAG00000003266rab5c9589.474Xiphophorus_maculatus

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