EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000002404 (Gene tree)
Gene ID: 108430170
Gene Symbol: rab18b
Alias: zgc:92523
Full Name: ras-related protein Rab-18-B
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 10534 bases
Position: chrKV575369.1:678009-688542
Accession: 108430170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000027301	MMR_HSR1	PF01926.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000002929	-	546	-	ENSPNAP00000027311	181 (aa)	-	-
ENSPNAT00000002900	-	746	XM_017702480	ENSPNAP00000027301	205 (aa)	XP_017557969	UPI0008142B02

Gene Model

Click here to download ENSPNAG00000002404's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000002404's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000002404	rab18b	71	46.259	ENSPNAG00000022929	rab33a	51	45.513
ENSPNAG00000002404	rab18b	93	44.615	ENSPNAG00000014046	-	96	44.615
ENSPNAG00000002404	rab18b	71	43.151	ENSPNAG00000017856	zgc:101559	64	43.151
ENSPNAG00000002404	rab18b	73	43.709	ENSPNAG00000029115	rab33ba	67	43.709
ENSPNAG00000002404	rab18b	80	44.848	ENSPNAG00000002218	-	93	42.000
ENSPNAG00000002404	rab18b	79	32.530	ENSPNAG00000025619	dnajc27	61	32.530
ENSPNAG00000002404	rab18b	96	37.624	ENSPNAG00000005519	-	95	37.624
ENSPNAG00000002404	rab18b	80	50.610	ENSPNAG00000010760	rab30	81	50.610
ENSPNAG00000002404	rab18b	83	46.199	ENSPNAG00000006431	-	78	46.199
ENSPNAG00000002404	rab18b	83	46.199	ENSPNAG00000020475	rab11ba	78	46.199
ENSPNAG00000002404	rab18b	84	39.429	ENSPNAG00000016567	rab42a	82	39.429
ENSPNAG00000002404	rab18b	95	45.641	ENSPNAG00000013863	rab1ab	88	45.641
ENSPNAG00000002404	rab18b	96	37.688	ENSPNAG00000028379	rab6ba	95	37.688
ENSPNAG00000002404	rab18b	93	36.082	ENSPNAG00000017938	RAB9A	89	36.082
ENSPNAG00000002404	rab18b	80	38.323	ENSPNAG00000016600	-	81	38.323
ENSPNAG00000002404	rab18b	86	35.714	ENSPNAG00000014146	-	85	35.714
ENSPNAG00000002404	rab18b	82	36.471	ENSPNAG00000026295	si:ch73-116o1.2	96	33.333
ENSPNAG00000002404	rab18b	79	32.934	ENSPNAG00000028497	si:cabz01085950.1	81	32.934
ENSPNAG00000002404	rab18b	80	38.323	ENSPNAG00000020583	zgc:100918	81	38.323
ENSPNAG00000002404	rab18b	87	47.826	ENSPNAG00000011193	rab2a	97	44.712
ENSPNAG00000002404	rab18b	81	34.337	ENSPNAG00000000584	hrasb	87	34.337
ENSPNAG00000002404	rab18b	80	46.341	ENSPNAG00000029085	rab11al	75	46.341
ENSPNAG00000002404	rab18b	79	47.561	ENSPNAG00000015031	rab12	66	47.561
ENSPNAG00000002404	rab18b	82	46.154	ENSPNAG00000015810	RAB15	81	46.154
ENSPNAG00000002404	rab18b	79	46.296	ENSPNAG00000000694	rab25a	78	46.250
ENSPNAG00000002404	rab18b	82	36.471	ENSPNAG00000013747	mras	81	36.471
ENSPNAG00000002404	rab18b	96	36.683	ENSPNAG00000010157	rab6bb	95	36.683
ENSPNAG00000002404	rab18b	83	40.462	ENSPNAG00000013589	rab39bb	81	40.462
ENSPNAG00000002404	rab18b	82	46.154	ENSPNAG00000011215	rab15	78	46.154
ENSPNAG00000002404	rab18b	79	44.444	ENSPNAG00000006569	rab25b	76	44.444
ENSPNAG00000002404	rab18b	93	40.686	ENSPNAG00000014363	-	94	40.686
ENSPNAG00000002404	rab18b	93	37.113	ENSPNAG00000007277	RAB9A	92	37.113
ENSPNAG00000002404	rab18b	79	48.765	ENSPNAG00000003227	rab3c	74	48.765
ENSPNAG00000002404	rab18b	94	40.909	ENSPNAG00000009496	rab5ab	90	40.909
ENSPNAG00000002404	rab18b	77	32.099	ENSPNAG00000004728	rheb	85	32.099
ENSPNAG00000002404	rab18b	81	34.337	ENSPNAG00000014085	hrasa	87	34.337
ENSPNAG00000002404	rab18b	80	36.471	ENSPNAG00000017466	rab38b	80	36.471
ENSPNAG00000002404	rab18b	83	45.614	ENSPNAG00000014863	rab11a	83	45.223
ENSPNAG00000002404	rab18b	81	50.299	ENSPNAG00000013004	rab1ba	83	50.299
ENSPNAG00000002404	rab18b	77	36.076	ENSPNAG00000024254	rabl2	69	36.076
ENSPNAG00000002404	rab18b	79	47.853	ENSPNAG00000004189	rab13	86	47.853
ENSPNAG00000002404	rab18b	95	41.294	ENSPNAG00000028138	rab5c	90	41.294
ENSPNAG00000002404	rab18b	80	43.636	ENSPNAG00000015161	rab22a	84	43.636
ENSPNAG00000002404	rab18b	80	37.725	ENSPNAG00000015164	-	81	37.725
ENSPNAG00000002404	rab18b	76	37.107	ENSPNAG00000021994	rab36	61	37.107
ENSPNAG00000002404	rab18b	81	34.337	ENSPNAG00000028629	kras	87	34.337
ENSPNAG00000002404	rab18b	54	38.739	ENSPNAG00000015040	rab34b	51	39.344
ENSPNAG00000002404	rab18b	83	39.884	ENSPNAG00000013897	rab39ba	81	39.884
ENSPNAG00000002404	rab18b	94	40.306	ENSPNAG00000023223	rab5aa	90	40.306
ENSPNAG00000002404	rab18b	90	32.258	ENSPNAG00000018361	rras	96	33.503
ENSPNAG00000002404	rab18b	81	42.442	ENSPNAG00000021675	-	80	42.442
ENSPNAG00000002404	rab18b	93	35.567	ENSPNAG00000018132	rab9b	87	35.567
ENSPNAG00000002404	rab18b	95	46.939	ENSPNAG00000029574	zgc:171927	92	46.939
ENSPNAG00000002404	rab18b	99	83.251	ENSPNAG00000011548	rab18a	100	83.251
ENSPNAG00000002404	rab18b	95	46.154	ENSPNAG00000012540	-	96	46.154
ENSPNAG00000002404	rab18b	83	40.936	ENSPNAG00000021737	rab41	79	40.936
ENSPNAG00000002404	rab18b	89	44.974	ENSPNAG00000018986	si:dkey-16l2.16	95	43.284
ENSPNAG00000002404	rab18b	83	37.791	ENSPNAG00000024728	rab23	74	37.662

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000002404	rab18b	100	87.379	ENSG00000099246	RAB18	100	87.379	Homo_sapiens
ENSPNAG00000002404	rab18b	99	86.275	ENSAPOG00000019881	rab18b	99	86.275	Acanthochromis_polyacanthus
ENSPNAG00000002404	rab18b	100	75.847	ENSAMEG00000015990	RAB18	100	75.847	Ailuropoda_melanoleuca
ENSPNAG00000002404	rab18b	99	87.255	ENSACIG00000008102	rab18b	99	87.255	Amphilophus_citrinellus
ENSPNAG00000002404	rab18b	99	86.275	ENSAOCG00000013479	rab18b	99	86.275	Amphiprion_ocellaris
ENSPNAG00000002404	rab18b	99	86.765	ENSAPEG00000022923	rab18b	99	86.765	Amphiprion_percula
ENSPNAG00000002404	rab18b	99	83.824	ENSATEG00000002952	rab18b	99	83.824	Anabas_testudineus
ENSPNAG00000002404	rab18b	100	87.379	ENSANAG00000035856	RAB18	100	87.379	Aotus_nancymaae
ENSPNAG00000002404	rab18b	99	86.765	ENSACLG00000015289	rab18b	99	86.765	Astatotilapia_calliptera
ENSPNAG00000002404	rab18b	100	96.585	ENSAMXG00000042073	rab18b	100	96.585	Astyanax_mexicanus
ENSPNAG00000002404	rab18b	100	85.024	ENSBTAG00000050873	-	100	85.024	Bos_taurus
ENSPNAG00000002404	rab18b	100	87.379	ENSBTAG00000009871	RAB18	88	87.379	Bos_taurus
ENSPNAG00000002404	rab18b	100	87.379	ENSCJAG00000045749	RAB18	100	87.379	Callithrix_jacchus
ENSPNAG00000002404	rab18b	100	86.893	ENSCAFG00020003253	RAB18	100	86.893	Canis_lupus_dingo
ENSPNAG00000002404	rab18b	100	87.379	ENSCHIG00000008749	RAB18	100	87.379	Capra_hircus
ENSPNAG00000002404	rab18b	100	86.893	ENSTSYG00000013092	RAB18	100	87.440	Carlito_syrichta
ENSPNAG00000002404	rab18b	100	87.440	ENSCPOG00000032827	RAB18	100	87.440	Cavia_porcellus
ENSPNAG00000002404	rab18b	100	87.379	ENSCCAG00000006762	RAB18	100	87.379	Cebus_capucinus
ENSPNAG00000002404	rab18b	100	87.379	ENSCATG00000009672	RAB18	100	87.379	Cercocebus_atys
ENSPNAG00000002404	rab18b	100	87.379	ENSCSAG00000011749	RAB18	100	87.379	Chlorocebus_sabaeus
ENSPNAG00000002404	rab18b	100	87.379	ENSCANG00000035397	RAB18	100	87.379	Colobus_angolensis_palliatus
ENSPNAG00000002404	rab18b	100	87.440	ENSCGRG00001017519	Rab18	100	87.440	Cricetulus_griseus_chok1gshd
ENSPNAG00000002404	rab18b	100	87.440	ENSCGRG00000017201	Rab18	100	87.440	Cricetulus_griseus_crigri
ENSPNAG00000002404	rab18b	94	86.979	ENSCSEG00000016803	rab18b	98	86.979	Cynoglossus_semilaevis
ENSPNAG00000002404	rab18b	100	94.146	ENSDARG00000098344	rab18b	100	94.146	Danio_rerio
ENSPNAG00000002404	rab18b	55	92.035	ENSDNOG00000038845	-	75	92.035	Dasypus_novemcinctus
ENSPNAG00000002404	rab18b	100	87.379	ENSDNOG00000047713	RAB18	100	87.379	Dasypus_novemcinctus
ENSPNAG00000002404	rab18b	85	85.057	ENSDORG00000029360	-	83	85.057	Dipodomys_ordii
ENSPNAG00000002404	rab18b	100	86.957	ENSDORG00000028596	-	100	86.957	Dipodomys_ordii
ENSPNAG00000002404	rab18b	100	86.893	ENSEASG00005007164	RAB18	100	87.440	Equus_asinus_asinus
ENSPNAG00000002404	rab18b	100	86.893	ENSECAG00000017521	RAB18	88	87.440	Equus_caballus
ENSPNAG00000002404	rab18b	99	91.220	ENSELUG00000016450	rab18b	99	91.220	Esox_lucius
ENSPNAG00000002404	rab18b	100	86.893	ENSFCAG00000027161	RAB18	100	86.893	Felis_catus
ENSPNAG00000002404	rab18b	94	88.542	ENSFALG00000007160	RAB18	100	86.473	Ficedula_albicollis
ENSPNAG00000002404	rab18b	99	85.784	ENSFHEG00000020035	rab18b	99	85.784	Fundulus_heteroclitus
ENSPNAG00000002404	rab18b	99	80.392	ENSGMOG00000016608	rab18b	99	80.392	Gadus_morhua
ENSPNAG00000002404	rab18b	100	87.864	ENSGALG00000007435	RAB18	100	87.864	Gallus_gallus
ENSPNAG00000002404	rab18b	99	85.784	ENSGAFG00000008560	rab18b	99	85.784	Gambusia_affinis
ENSPNAG00000002404	rab18b	99	85.294	ENSGACG00000016395	rab18b	99	85.294	Gasterosteus_aculeatus
ENSPNAG00000002404	rab18b	100	87.379	ENSGGOG00000008086	RAB18	100	87.379	Gorilla_gorilla
ENSPNAG00000002404	rab18b	99	86.765	ENSHBUG00000003696	rab18b	99	86.765	Haplochromis_burtoni
ENSPNAG00000002404	rab18b	100	87.440	ENSHGLG00000004365	RAB18	100	87.440	Heterocephalus_glaber_female
ENSPNAG00000002404	rab18b	99	74.146	ENSHGLG00000007301	-	95	74.146	Heterocephalus_glaber_female
ENSPNAG00000002404	rab18b	100	87.440	ENSHGLG00100013089	-	100	87.440	Heterocephalus_glaber_male
ENSPNAG00000002404	rab18b	99	74.146	ENSHGLG00100009117	-	95	74.146	Heterocephalus_glaber_male
ENSPNAG00000002404	rab18b	99	84.804	ENSHCOG00000002217	rab18b	99	84.804	Hippocampus_comes
ENSPNAG00000002404	rab18b	100	92.683	ENSIPUG00000010859	rab18b	100	92.683	Ictalurus_punctatus
ENSPNAG00000002404	rab18b	100	87.440	ENSSTOG00000014560	-	100	87.440	Ictidomys_tridecemlineatus
ENSPNAG00000002404	rab18b	99	85.784	ENSKMAG00000007364	rab18b	99	85.784	Kryptolebias_marmoratus
ENSPNAG00000002404	rab18b	99	85.784	ENSLBEG00000019428	rab18b	99	85.784	Labrus_bergylta
ENSPNAG00000002404	rab18b	100	76.098	ENSLACG00000011256	rab18b	100	76.098	Latimeria_chalumnae
ENSPNAG00000002404	rab18b	94	88.542	ENSLAFG00000015582	RAB18	100	86.957	Loxodonta_africana
ENSPNAG00000002404	rab18b	100	87.379	ENSMFAG00000006430	RAB18	100	87.379	Macaca_fascicularis
ENSPNAG00000002404	rab18b	100	85.922	ENSMMUG00000046971	RAB18	74	85.922	Macaca_mulatta
ENSPNAG00000002404	rab18b	100	87.379	ENSMNEG00000038180	RAB18	100	87.379	Macaca_nemestrina
ENSPNAG00000002404	rab18b	100	87.379	ENSMLEG00000033595	RAB18	100	87.379	Mandrillus_leucophaeus
ENSPNAG00000002404	rab18b	100	83.902	ENSMAMG00000018445	rab18b	100	83.902	Mastacembelus_armatus
ENSPNAG00000002404	rab18b	99	86.765	ENSMZEG00005008244	rab18b	99	86.765	Maylandia_zebra
ENSPNAG00000002404	rab18b	100	78.537	ENSMAUG00000020698	-	100	78.537	Mesocricetus_auratus
ENSPNAG00000002404	rab18b	94	88.542	ENSMICG00000017280	RAB18	100	86.893	Microcebus_murinus
ENSPNAG00000002404	rab18b	100	87.440	ENSMOCG00000013044	Rab18	100	87.440	Microtus_ochrogaster
ENSPNAG00000002404	rab18b	91	76.263	ENSMMOG00000017849	rab18b	99	74.537	Mola_mola
ENSPNAG00000002404	rab18b	100	77.073	ENSMODG00000024936	-	100	77.073	Monodelphis_domestica
ENSPNAG00000002404	rab18b	100	87.317	ENSMODG00000008253	RAB18	100	87.317	Monodelphis_domestica
ENSPNAG00000002404	rab18b	99	84.804	ENSMALG00000005069	rab18b	99	84.804	Monopterus_albus
ENSPNAG00000002404	rab18b	100	86.893	MGP_CAROLIEiJ_G0021978	Rab18	100	86.893	Mus_caroli
ENSPNAG00000002404	rab18b	100	86.893	ENSMUSG00000073639	Rab18	100	86.893	Mus_musculus
ENSPNAG00000002404	rab18b	100	86.893	MGP_PahariEiJ_G0018716	Rab18	100	86.893	Mus_pahari
ENSPNAG00000002404	rab18b	100	86.893	MGP_SPRETEiJ_G0022894	Rab18	100	86.893	Mus_spretus
ENSPNAG00000002404	rab18b	100	86.893	ENSMPUG00000010592	RAB18	100	86.893	Mustela_putorius_furo
ENSPNAG00000002404	rab18b	100	75.847	ENSMLUG00000027295	RAB18	100	76.371	Myotis_lucifugus
ENSPNAG00000002404	rab18b	100	87.440	ENSNGAG00000001465	Rab18	100	87.440	Nannospalax_galili
ENSPNAG00000002404	rab18b	99	86.275	ENSNBRG00000008137	rab18b	99	86.275	Neolamprologus_brichardi
ENSPNAG00000002404	rab18b	100	87.379	ENSNLEG00000016970	RAB18	100	87.379	Nomascus_leucogenys
ENSPNAG00000002404	rab18b	100	87.440	ENSODEG00000004150	-	100	87.440	Octodon_degus
ENSPNAG00000002404	rab18b	99	86.275	ENSONIG00000018673	rab18b	99	86.275	Oreochromis_niloticus
ENSPNAG00000002404	rab18b	100	87.379	ENSOANG00000021391	RAB18	100	87.923	Ornithorhynchus_anatinus
ENSPNAG00000002404	rab18b	100	86.957	ENSOCUG00000022307	RAB18	100	86.957	Oryctolagus_cuniculus
ENSPNAG00000002404	rab18b	99	85.784	ENSORLG00000009609	rab18b	99	85.784	Oryzias_latipes
ENSPNAG00000002404	rab18b	99	85.784	ENSORLG00020011590	rab18b	99	85.784	Oryzias_latipes_hni
ENSPNAG00000002404	rab18b	99	85.784	ENSORLG00015007182	rab18b	99	85.784	Oryzias_latipes_hsok
ENSPNAG00000002404	rab18b	99	85.784	ENSOMEG00000007546	rab18b	99	85.784	Oryzias_melastigma
ENSPNAG00000002404	rab18b	94	88.542	ENSOGAG00000028015	RAB18	100	86.893	Otolemur_garnettii
ENSPNAG00000002404	rab18b	100	87.379	ENSOARG00000016208	RAB18	100	87.379	Ovis_aries
ENSPNAG00000002404	rab18b	100	87.379	ENSPPAG00000041625	RAB18	100	87.379	Pan_paniscus
ENSPNAG00000002404	rab18b	100	86.893	ENSPPRG00000010314	RAB18	100	86.893	Panthera_pardus
ENSPNAG00000002404	rab18b	100	86.893	ENSPTIG00000011667	RAB18	100	86.893	Panthera_tigris_altaica
ENSPNAG00000002404	rab18b	100	87.379	ENSPTRG00000002384	RAB18	100	87.379	Pan_troglodytes
ENSPNAG00000002404	rab18b	100	87.379	ENSPANG00000023005	RAB18	100	87.379	Papio_anubis
ENSPNAG00000002404	rab18b	98	85.294	ENSPMAG00000005322	rab18b	98	85.294	Petromyzon_marinus
ENSPNAG00000002404	rab18b	100	87.317	ENSPCIG00000028705	-	88	87.317	Phascolarctos_cinereus
ENSPNAG00000002404	rab18b	99	86.275	ENSPFOG00000013491	rab18b	99	86.275	Poecilia_formosa
ENSPNAG00000002404	rab18b	99	86.275	ENSPLAG00000019136	rab18b	99	86.275	Poecilia_latipinna
ENSPNAG00000002404	rab18b	99	86.275	ENSPMEG00000008223	rab18b	99	86.275	Poecilia_mexicana
ENSPNAG00000002404	rab18b	100	87.379	ENSPPYG00000002172	RAB18	100	87.379	Pongo_abelii
ENSPNAG00000002404	rab18b	94	88.542	ENSPCOG00000018906	RAB18	100	86.893	Propithecus_coquereli
ENSPNAG00000002404	rab18b	99	86.765	ENSPNYG00000001751	rab18b	99	86.765	Pundamilia_nyererei
ENSPNAG00000002404	rab18b	100	86.893	ENSRNOG00000018972	Rab18	100	86.893	Rattus_norvegicus
ENSPNAG00000002404	rab18b	100	86.893	ENSRBIG00000035948	RAB18	100	86.893	Rhinopithecus_bieti
ENSPNAG00000002404	rab18b	100	87.379	ENSRROG00000040563	RAB18	100	87.379	Rhinopithecus_roxellana
ENSPNAG00000002404	rab18b	100	87.805	ENSSHAG00000007613	RAB18	100	87.805	Sarcophilus_harrisii
ENSPNAG00000002404	rab18b	99	85.784	ENSSMAG00000011814	rab18b	99	85.784	Scophthalmus_maximus
ENSPNAG00000002404	rab18b	99	86.765	ENSSDUG00000005960	rab18b	99	86.765	Seriola_dumerili
ENSPNAG00000002404	rab18b	99	86.765	ENSSLDG00000006014	rab18b	99	86.765	Seriola_lalandi_dorsalis
ENSPNAG00000002404	rab18b	99	87.255	ENSSPAG00000020875	rab18b	99	87.255	Stegastes_partitus
ENSPNAG00000002404	rab18b	100	87.379	ENSSSCG00000028655	RAB18	100	87.379	Sus_scrofa
ENSPNAG00000002404	rab18b	94	77.626	ENSTGUG00000001105	-	100	76.496	Taeniopygia_guttata
ENSPNAG00000002404	rab18b	99	87.255	ENSTRUG00000004283	rab18b	99	87.255	Takifugu_rubripes
ENSPNAG00000002404	rab18b	99	87.317	ENSTNIG00000007882	rab18b	99	87.317	Tetraodon_nigroviridis
ENSPNAG00000002404	rab18b	100	86.893	ENSVVUG00000001705	RAB18	100	86.893	Vulpes_vulpes
ENSPNAG00000002404	rab18b	99	85.784	ENSXMAG00000006945	rab18b	99	85.784	Xiphophorus_maculatus