EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000002527 (Gene tree)
Gene ID: 108435972
Gene Symbol: camk1b
Alias: -
Full Name: calcium/calmodulin-dependent protein kinase type 1-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 78788 bases
Position: chrKV575292.1:4314628-4393415
Accession: 108435972
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000027496	RIO1	PF01163.22	0.00027	1	1
ENSPNAP00000007129	RIO1	PF01163.22	0.00039	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000002357	-	1546	-	ENSPNAP00000007129	474 (aa)	-	-
ENSPNAT00000002413	-	1463	-	ENSPNAP00000007107	486 (aa)	-	-
ENSPNAT00000002394	-	1223	XM_017712158	ENSPNAP00000027496	406 (aa)	XP_017567647	UPI0008142603

Gene Model

Click here to download ENSPNAG00000002527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000002527's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000002527	camk1b	64	33.582	ENSPNAG00000020053	tssk6	95	33.582
ENSPNAG00000002527	camk1b	64	35.985	ENSPNAG00000022780	rps6ka4	69	35.985
ENSPNAG00000002527	camk1b	88	33.962	ENSPNAG00000013223	dapk2b	93	36.593
ENSPNAG00000002527	camk1b	63	40.520	ENSPNAG00000007377	phkg1a	70	39.695
ENSPNAG00000002527	camk1b	61	39.286	ENSPNAG00000010482	-	58	39.286
ENSPNAG00000002527	camk1b	76	37.812	ENSPNAG00000010456	-	89	37.812
ENSPNAG00000002527	camk1b	78	65.094	ENSPNAG00000007359	camk1ga	73	65.094

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000002527	camk1b	86	89.943	ENSCSEG00000004982	camk1b	98	89.943	Cynoglossus_semilaevis
ENSPNAG00000002527	camk1b	100	84.314	ENSELUG00000008588	camk1b	100	85.279	Esox_lucius
ENSPNAG00000002527	camk1b	61	95.122	ENSGMOG00000001841	-	100	95.122	Gadus_morhua
ENSPNAG00000002527	camk1b	85	88.953	ENSGMOG00000016883	camk1a	100	88.953	Gadus_morhua
ENSPNAG00000002527	camk1b	89	92.033	ENSSFOG00015019005	camk1	92	93.678	Scleropages_formosus
ENSPNAG00000002527	camk1b	97	82.487	ENSSFOG00015021178	camk1a	100	82.487	Scleropages_formosus
ENSPNAG00000002527	camk1b	93	82.105	ENSXETG00000023672	camk1	99	82.105	Xenopus_tropicalis