EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000002531 (Gene tree)
Gene ID: 108435877
Gene Symbol: alyref
Alias: tho4|thoc4|zgc:171753
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 7074 bases
Position: chrKV575481.1:1275279-1282352
Accession: 108435877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000027526	RRM_1	PF00076.22	1.3e-13	1	1
ENSPNAP00000007162	RRM_1	PF00076.22	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000002329	-	2391	XM_017712003	ENSPNAP00000027526	272 (aa)	XP_017567492	UPI0008144059
ENSPNAT00000002316	-	870	-	ENSPNAP00000007162	289 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000002531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000002531's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000002531	alyref	100	53.047	ENSAPOG00000000183	-	100	51.590	Acanthochromis_polyacanthus
ENSPNAG00000002531	alyref	100	48.084	ENSACIG00000020351	-	100	49.129	Amphilophus_citrinellus
ENSPNAG00000002531	alyref	99	69.231	ENSACIG00000006351	alyref	98	73.551	Amphilophus_citrinellus
ENSPNAG00000002531	alyref	100	73.551	ENSAOCG00000014012	alyref	100	77.256	Amphiprion_ocellaris
ENSPNAG00000002531	alyref	100	53.405	ENSAOCG00000019305	-	100	51.228	Amphiprion_ocellaris
ENSPNAG00000002531	alyref	100	54.122	ENSAPEG00000013527	-	100	51.228	Amphiprion_percula
ENSPNAG00000002531	alyref	100	73.551	ENSAPEG00000014603	alyref	100	77.256	Amphiprion_percula
ENSPNAG00000002531	alyref	100	68.571	ENSATEG00000004307	alyref	100	78.929	Anabas_testudineus
ENSPNAG00000002531	alyref	100	55.714	ENSATEG00000000382	-	100	50.865	Anabas_testudineus
ENSPNAG00000002531	alyref	51	70.922	ENSAPLG00000014745	-	100	70.922	Anas_platyrhynchos
ENSPNAG00000002531	alyref	100	72.924	ENSACLG00000008432	alyref	100	74.460	Astatotilapia_calliptera
ENSPNAG00000002531	alyref	100	51.724	ENSACLG00000010184	-	100	50.847	Astatotilapia_calliptera
ENSPNAG00000002531	alyref	100	75.357	ENSAMXG00000007359	alyref	100	77.224	Astyanax_mexicanus
ENSPNAG00000002531	alyref	99	46.763	ENSCING00000013568	-	97	45.956	Ciona_intestinalis
ENSPNAG00000002531	alyref	99	44.891	ENSCSAVG00000003324	-	99	43.011	Ciona_savignyi
ENSPNAG00000002531	alyref	100	73.913	ENSCSEG00000017800	alyref	100	75.362	Cynoglossus_semilaevis
ENSPNAG00000002531	alyref	100	69.565	ENSCVAG00000014869	alyref	100	77.536	Cyprinodon_variegatus
ENSPNAG00000002531	alyref	100	46.350	ENSCVAG00000007789	-	100	46.043	Cyprinodon_variegatus
ENSPNAG00000002531	alyref	100	80.851	ENSDARG00000077732	alyref	100	80.851	Danio_rerio
ENSPNAG00000002531	alyref	97	46.739	FBgn0010774	Ref1	98	43.820	Drosophila_melanogaster
ENSPNAG00000002531	alyref	99	52.788	ENSEBUG00000008253	alyref	95	50.558	Eptatretus_burgeri
ENSPNAG00000002531	alyref	71	46.535	ENSEBUG00000006305	alyref	100	39.007	Eptatretus_burgeri
ENSPNAG00000002531	alyref	100	65.957	ENSELUG00000008849	-	100	65.603	Esox_lucius
ENSPNAG00000002531	alyref	100	71.898	ENSELUG00000017178	alyref	100	75.547	Esox_lucius
ENSPNAG00000002531	alyref	59	76.398	ENSFALG00000011923	-	96	75.472	Ficedula_albicollis
ENSPNAG00000002531	alyref	100	72.101	ENSFHEG00000019426	alyref	100	74.275	Fundulus_heteroclitus
ENSPNAG00000002531	alyref	100	48.188	ENSFHEG00000004698	-	100	46.014	Fundulus_heteroclitus
ENSPNAG00000002531	alyref	100	67.766	ENSGMOG00000009882	alyref	100	66.667	Gadus_morhua
ENSPNAG00000002531	alyref	68	60.622	ENSGMOG00000013122	-	100	53.110	Gadus_morhua
ENSPNAG00000002531	alyref	100	47.445	ENSGAFG00000007573	-	100	46.350	Gambusia_affinis
ENSPNAG00000002531	alyref	100	72.202	ENSGAFG00000006014	alyref	100	74.729	Gambusia_affinis
ENSPNAG00000002531	alyref	100	53.425	ENSHBUG00000001454	-	100	51.525	Haplochromis_burtoni
ENSPNAG00000002531	alyref	100	72.924	ENSHBUG00000020196	alyref	100	74.460	Haplochromis_burtoni
ENSPNAG00000002531	alyref	98	49.270	ENSHCOG00000012825	-	80	52.632	Hippocampus_comes
ENSPNAG00000002531	alyref	100	85.294	ENSIPUG00000009469	alyref	100	80.935	Ictalurus_punctatus
ENSPNAG00000002531	alyref	72	65.000	ENSSTOG00000016570	-	98	63.000	Ictidomys_tridecemlineatus
ENSPNAG00000002531	alyref	100	51.254	ENSKMAG00000006462	-	100	49.275	Kryptolebias_marmoratus
ENSPNAG00000002531	alyref	100	76.534	ENSKMAG00000008912	alyref	100	77.419	Kryptolebias_marmoratus
ENSPNAG00000002531	alyref	99	48.175	ENSLBEG00000012930	-	99	44.211	Labrus_bergylta
ENSPNAG00000002531	alyref	100	72.302	ENSLBEG00000023118	alyref	93	73.077	Labrus_bergylta
ENSPNAG00000002531	alyref	100	48.464	ENSLBEG00000005387	-	100	49.655	Labrus_bergylta
ENSPNAG00000002531	alyref	77	77.778	ENSLOCG00000013879	alyref	89	73.059	Lepisosteus_oculatus
ENSPNAG00000002531	alyref	100	50.360	ENSMAMG00000005464	-	100	49.640	Mastacembelus_armatus
ENSPNAG00000002531	alyref	100	70.036	ENSMAMG00000003034	alyref	100	75.180	Mastacembelus_armatus
ENSPNAG00000002531	alyref	100	51.379	ENSMZEG00005012096	-	100	50.508	Maylandia_zebra
ENSPNAG00000002531	alyref	100	72.924	ENSMZEG00005008639	alyref	100	74.460	Maylandia_zebra
ENSPNAG00000002531	alyref	99	76.190	ENSMMOG00000012458	alyref	97	75.725	Mola_mola
ENSPNAG00000002531	alyref	99	48.352	ENSMMOG00000007032	-	98	46.154	Mola_mola
ENSPNAG00000002531	alyref	100	50.345	ENSMALG00000006054	-	100	45.791	Monopterus_albus
ENSPNAG00000002531	alyref	100	59.857	ENSMLUG00000014372	-	100	55.160	Myotis_lucifugus
ENSPNAG00000002531	alyref	100	56.631	ENSMLUG00000006521	-	100	55.160	Myotis_lucifugus
ENSPNAG00000002531	alyref	98	56.777	ENSMLUG00000030671	-	99	54.874	Myotis_lucifugus
ENSPNAG00000002531	alyref	98	54.152	ENSMLUG00000028605	-	98	52.899	Myotis_lucifugus
ENSPNAG00000002531	alyref	98	56.716	ENSMLUG00000022178	-	98	53.731	Myotis_lucifugus
ENSPNAG00000002531	alyref	100	59.286	ENSMLUG00000004098	-	100	54.448	Myotis_lucifugus
ENSPNAG00000002531	alyref	98	56.250	ENSMLUG00000009247	-	98	52.593	Myotis_lucifugus
ENSPNAG00000002531	alyref	98	55.282	ENSMLUG00000022467	-	98	52.518	Myotis_lucifugus
ENSPNAG00000002531	alyref	100	65.074	ENSNGAG00000022014	-	100	63.235	Nannospalax_galili
ENSPNAG00000002531	alyref	100	52.431	ENSNBRG00000017460	-	100	54.355	Neolamprologus_brichardi
ENSPNAG00000002531	alyref	100	72.563	ENSNBRG00000001747	alyref	100	74.820	Neolamprologus_brichardi
ENSPNAG00000002531	alyref	100	72.500	ENSONIG00000019434	alyref	100	76.786	Oreochromis_niloticus
ENSPNAG00000002531	alyref	100	55.556	ENSONIG00000003296	-	97	54.676	Oreochromis_niloticus
ENSPNAG00000002531	alyref	99	40.752	ENSORLG00000001620	-	56	47.393	Oryzias_latipes
ENSPNAG00000002531	alyref	100	73.188	ENSORLG00020011942	alyref	100	76.087	Oryzias_latipes_hni
ENSPNAG00000002531	alyref	100	46.953	ENSORLG00020015673	-	100	46.429	Oryzias_latipes_hni
ENSPNAG00000002531	alyref	100	75.000	ENSORLG00015022664	alyref	100	76.087	Oryzias_latipes_hsok
ENSPNAG00000002531	alyref	100	47.687	ENSORLG00015015143	-	100	46.786	Oryzias_latipes_hsok
ENSPNAG00000002531	alyref	100	76.087	ENSOMEG00000019176	alyref	100	76.087	Oryzias_melastigma
ENSPNAG00000002531	alyref	99	50.542	ENSOMEG00000007158	-	97	45.455	Oryzias_melastigma
ENSPNAG00000002531	alyref	68	74.731	ENSPPAG00000036403	-	78	69.953	Pan_paniscus
ENSPNAG00000002531	alyref	99	75.368	ENSPKIG00000006233	-	81	72.059	Paramormyrops_kingsleyae
ENSPNAG00000002531	alyref	100	72.794	ENSPKIG00000007070	alyref	100	74.632	Paramormyrops_kingsleyae
ENSPNAG00000002531	alyref	71	49.749	ENSPMGG00000012994	-	97	45.729	Periophthalmus_magnuspinnatus
ENSPNAG00000002531	alyref	99	68.132	ENSPMGG00000016600	alyref	92	71.685	Periophthalmus_magnuspinnatus
ENSPNAG00000002531	alyref	100	62.132	ENSPEMG00000016628	-	100	57.721	Peromyscus_maniculatus_bairdii
ENSPNAG00000002531	alyref	100	72.662	ENSPFOG00000022825	alyref	99	74.820	Poecilia_formosa
ENSPNAG00000002531	alyref	100	46.595	ENSPFOG00000017094	-	100	45.818	Poecilia_formosa
ENSPNAG00000002531	alyref	100	72.563	ENSPLAG00000006948	alyref	100	75.090	Poecilia_latipinna
ENSPNAG00000002531	alyref	100	46.595	ENSPLAG00000014380	-	100	45.818	Poecilia_latipinna
ENSPNAG00000002531	alyref	100	46.595	ENSPMEG00000023039	-	100	45.818	Poecilia_mexicana
ENSPNAG00000002531	alyref	100	72.662	ENSPMEG00000003547	alyref	100	74.820	Poecilia_mexicana
ENSPNAG00000002531	alyref	100	71.841	ENSPREG00000015795	alyref	100	75.451	Poecilia_reticulata
ENSPNAG00000002531	alyref	100	50.000	ENSPREG00000003649	-	100	45.652	Poecilia_reticulata
ENSPNAG00000002531	alyref	100	72.924	ENSPNYG00000017498	alyref	100	74.460	Pundamilia_nyererei
ENSPNAG00000002531	alyref	99	50.538	ENSPNYG00000002879	-	98	48.110	Pundamilia_nyererei
ENSPNAG00000002531	alyref	86	69.528	ENSSBOG00000030924	-	87	73.333	Saimiri_boliviensis_boliviensis
ENSPNAG00000002531	alyref	99	57.401	ENSSHAG00000000609	-	99	54.412	Sarcophilus_harrisii
ENSPNAG00000002531	alyref	99	55.882	ENSSHAG00000012866	-	78	58.852	Sarcophilus_harrisii
ENSPNAG00000002531	alyref	77	84.689	ENSSFOG00015003923	alyref	73	83.254	Scleropages_formosus
ENSPNAG00000002531	alyref	69	79.894	ENSSFOG00015003678	alyref	83	79.365	Scleropages_formosus
ENSPNAG00000002531	alyref	100	71.273	ENSSMAG00000009283	alyref	100	75.273	Scophthalmus_maximus
ENSPNAG00000002531	alyref	100	50.877	ENSSMAG00000011169	-	100	54.229	Scophthalmus_maximus
ENSPNAG00000002531	alyref	100	73.551	ENSSDUG00000016158	alyref	100	77.978	Seriola_dumerili
ENSPNAG00000002531	alyref	100	71.480	ENSSLDG00000017803	alyref	100	77.338	Seriola_lalandi_dorsalis
ENSPNAG00000002531	alyref	99	53.261	ENSSPAG00000017028	-	96	51.064	Stegastes_partitus
ENSPNAG00000002531	alyref	100	54.007	ENSTRUG00000003051	-	100	51.211	Takifugu_rubripes
ENSPNAG00000002531	alyref	100	52.364	ENSTNIG00000014136	-	100	48.727	Tetraodon_nigroviridis
ENSPNAG00000002531	alyref	100	70.357	ENSTNIG00000011595	alyref	100	65.950	Tetraodon_nigroviridis
ENSPNAG00000002531	alyref	70	74.737	ENSVVUG00000000272	-	82	73.545	Vulpes_vulpes
ENSPNAG00000002531	alyref	99	71.168	ENSXCOG00000018047	alyref	99	72.924	Xiphophorus_couchianus
ENSPNAG00000002531	alyref	99	71.168	ENSXMAG00000012218	alyref	99	72.924	Xiphophorus_maculatus
ENSPNAG00000002531	alyref	100	47.482	ENSXMAG00000018086	-	100	45.620	Xiphophorus_maculatus