EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000002539 (Gene tree)
Gene ID: 108434861
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 4309 bases
Position: chrKV575452.1:900355-904663
Accession: 108434861
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000007198	zf-CCHC	PF00098.23	1.2e-07	1	1
ENSPNAP00000007198	RRM_5	PF13893.6	1.1e-06	1	1
ENSPNAP00000007198	RRM_1	PF00076.22	6.6e-35	1	2
ENSPNAP00000007198	RRM_1	PF00076.22	6.6e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000002244	-	3727	XM_017710284	ENSPNAP00000007198	416 (aa)	XP_017565773	UPI000814A92E

Gene Model

Click here to download ENSPNAG00000002539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000002539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000002539	rbm4.1	100	56.325	ENSPNAG00000013057	rbm4.2	100	55.213
ENSPNAG00000002539	rbm4.1	99	44.762	ENSPNAG00000013053	rbm4.3	97	38.292

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000002539	rbm4.1	100	69.484	ENSAPOG00000012353	rbm4.1	100	67.925	Acanthochromis_polyacanthus
ENSPNAG00000002539	rbm4.1	100	68.000	ENSACIG00000016482	rbm4.1	100	68.000	Amphilophus_citrinellus
ENSPNAG00000002539	rbm4.1	100	69.249	ENSAOCG00000010915	rbm4.1	100	67.689	Amphiprion_ocellaris
ENSPNAG00000002539	rbm4.1	100	69.249	ENSAPEG00000009494	rbm4.1	100	67.689	Amphiprion_percula
ENSPNAG00000002539	rbm4.1	100	68.618	ENSATEG00000001904	rbm4.1	100	68.000	Anabas_testudineus
ENSPNAG00000002539	rbm4.1	96	50.000	ENSACLG00000007740	-	96	50.611	Astatotilapia_calliptera
ENSPNAG00000002539	rbm4.1	100	68.000	ENSACLG00000007722	rbm4.1	100	68.000	Astatotilapia_calliptera
ENSPNAG00000002539	rbm4.1	100	81.010	ENSAMXG00000036611	rbm4.1	100	79.567	Astyanax_mexicanus
ENSPNAG00000002539	rbm4.1	99	52.885	ENSCSEG00000014359	-	99	51.691	Cynoglossus_semilaevis
ENSPNAG00000002539	rbm4.1	100	62.736	ENSCSEG00000014365	rbm4.1	100	61.792	Cynoglossus_semilaevis
ENSPNAG00000002539	rbm4.1	100	64.569	ENSCVAG00000019349	rbm4.1	100	63.294	Cyprinodon_variegatus
ENSPNAG00000002539	rbm4.1	100	77.725	ENSDARG00000036386	rbm4.1	100	74.882	Danio_rerio
ENSPNAG00000002539	rbm4.1	100	55.792	ENSDARG00000055080	rbm4.2	100	55.687	Danio_rerio
ENSPNAG00000002539	rbm4.1	100	68.545	ENSELUG00000013205	rbm4.1	100	68.941	Esox_lucius
ENSPNAG00000002539	rbm4.1	100	64.637	ENSFHEG00000022926	rbm4.1	100	62.824	Fundulus_heteroclitus
ENSPNAG00000002539	rbm4.1	100	63.256	ENSGMOG00000007464	rbm4.1	100	64.319	Gadus_morhua
ENSPNAG00000002539	rbm4.1	92	52.835	ENSGMOG00000007455	-	99	51.667	Gadus_morhua
ENSPNAG00000002539	rbm4.1	100	64.733	ENSGAFG00000019302	rbm4.1	100	63.232	Gambusia_affinis
ENSPNAG00000002539	rbm4.1	100	66.042	ENSGACG00000000822	rbm4.1	100	65.412	Gasterosteus_aculeatus
ENSPNAG00000002539	rbm4.1	94	51.020	ENSGACG00000000821	-	94	51.908	Gasterosteus_aculeatus
ENSPNAG00000002539	rbm4.1	100	68.000	ENSHBUG00000011610	rbm4.1	100	68.000	Haplochromis_burtoni
ENSPNAG00000002539	rbm4.1	92	65.296	ENSHCOG00000011403	rbm4.1	95	63.896	Hippocampus_comes
ENSPNAG00000002539	rbm4.1	100	55.000	ENSIPUG00000022937	rbm4.2	100	54.502	Ictalurus_punctatus
ENSPNAG00000002539	rbm4.1	100	77.209	ENSIPUG00000022931	rbm4.1	100	76.102	Ictalurus_punctatus
ENSPNAG00000002539	rbm4.1	100	63.256	ENSKMAG00000006556	rbm4.1	100	61.268	Kryptolebias_marmoratus
ENSPNAG00000002539	rbm4.1	99	49.029	ENSLBEG00000019756	-	90	61.538	Labrus_bergylta
ENSPNAG00000002539	rbm4.1	100	67.056	ENSLBEG00000019782	rbm4.1	100	67.290	Labrus_bergylta
ENSPNAG00000002539	rbm4.1	100	68.150	ENSMAMG00000001765	rbm4.1	100	67.529	Mastacembelus_armatus
ENSPNAG00000002539	rbm4.1	98	52.758	ENSMAMG00000001760	-	96	51.781	Mastacembelus_armatus
ENSPNAG00000002539	rbm4.1	100	68.000	ENSMZEG00005009205	rbm4.1	100	68.000	Maylandia_zebra
ENSPNAG00000002539	rbm4.1	100	65.501	ENSMMOG00000020479	rbm4.1	100	64.871	Mola_mola
ENSPNAG00000002539	rbm4.1	99	52.415	ENSMALG00000020557	-	99	53.511	Monopterus_albus
ENSPNAG00000002539	rbm4.1	100	68.531	ENSMALG00000020544	rbm4.1	100	67.294	Monopterus_albus
ENSPNAG00000002539	rbm4.1	100	68.000	ENSNBRG00000017755	rbm4.1	100	68.000	Neolamprologus_brichardi
ENSPNAG00000002539	rbm4.1	100	68.000	ENSONIG00000015730	rbm4.1	100	68.000	Oreochromis_niloticus
ENSPNAG00000002539	rbm4.1	100	63.146	ENSORLG00000012496	rbm4.1	100	62.911	Oryzias_latipes
ENSPNAG00000002539	rbm4.1	100	63.146	ENSORLG00020012454	rbm4.1	100	62.911	Oryzias_latipes_hni
ENSPNAG00000002539	rbm4.1	100	63.146	ENSORLG00015013678	rbm4.1	100	62.911	Oryzias_latipes_hsok
ENSPNAG00000002539	rbm4.1	100	64.169	ENSOMEG00000001001	rbm4.1	100	63.700	Oryzias_melastigma
ENSPNAG00000002539	rbm4.1	100	68.852	ENSPKIG00000020805	rbm4.1	87	85.507	Paramormyrops_kingsleyae
ENSPNAG00000002539	rbm4.1	100	65.035	ENSPFOG00000012675	rbm4.1	100	63.232	Poecilia_formosa
ENSPNAG00000002539	rbm4.1	99	48.905	ENSPFOG00000012685	-	99	48.058	Poecilia_formosa
ENSPNAG00000002539	rbm4.1	100	65.035	ENSPLAG00000018572	rbm4.1	100	63.232	Poecilia_latipinna
ENSPNAG00000002539	rbm4.1	100	65.035	ENSPMEG00000006290	rbm4.1	100	63.232	Poecilia_mexicana
ENSPNAG00000002539	rbm4.1	99	46.472	ENSPREG00000003764	-	87	67.742	Poecilia_reticulata
ENSPNAG00000002539	rbm4.1	100	65.035	ENSPREG00000003724	rbm4.1	100	63.232	Poecilia_reticulata
ENSPNAG00000002539	rbm4.1	100	68.000	ENSPNYG00000004662	rbm4.1	100	68.000	Pundamilia_nyererei
ENSPNAG00000002539	rbm4.1	100	69.087	ENSSFOG00015021996	sf1	100	69.321	Scleropages_formosus
ENSPNAG00000002539	rbm4.1	100	66.432	ENSSMAG00000007571	rbm4.1	100	63.915	Scophthalmus_maximus
ENSPNAG00000002539	rbm4.1	100	68.618	ENSSDUG00000003925	rbm4.1	100	68.000	Seriola_dumerili
ENSPNAG00000002539	rbm4.1	95	55.025	ENSSDUG00000003936	-	99	54.699	Seriola_dumerili
ENSPNAG00000002539	rbm4.1	100	68.618	ENSSLDG00000013147	rbm4.1	100	68.000	Seriola_lalandi_dorsalis
ENSPNAG00000002539	rbm4.1	95	52.273	ENSSLDG00000013157	-	99	53.828	Seriola_lalandi_dorsalis
ENSPNAG00000002539	rbm4.1	99	49.637	ENSSPAG00000019046	-	99	50.000	Stegastes_partitus
ENSPNAG00000002539	rbm4.1	100	67.991	ENSSPAG00000019053	rbm4.1	100	67.606	Stegastes_partitus
ENSPNAG00000002539	rbm4.1	99	49.395	ENSTRUG00000013328	-	99	49.517	Takifugu_rubripes
ENSPNAG00000002539	rbm4.1	100	65.258	ENSTRUG00000013334	rbm4.1	100	64.387	Takifugu_rubripes
ENSPNAG00000002539	rbm4.1	78	77.612	ENSTNIG00000004821	rbm4.1	94	81.183	Tetraodon_nigroviridis
ENSPNAG00000002539	rbm4.1	98	47.677	ENSTNIG00000000316	-	98	49.635	Tetraodon_nigroviridis
ENSPNAG00000002539	rbm4.1	88	66.497	ENSXETG00000026649	rbm4b	99	67.725	Xenopus_tropicalis
ENSPNAG00000002539	rbm4.1	100	65.268	ENSXCOG00000003731	rbm4.1	100	63.466	Xiphophorus_couchianus
ENSPNAG00000002539	rbm4.1	94	72.393	ENSXMAG00000008059	-	87	69.355	Xiphophorus_maculatus
ENSPNAG00000002539	rbm4.1	100	65.268	ENSXMAG00000008069	rbm4.1	100	63.466	Xiphophorus_maculatus