EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000002567 (Gene tree)
Gene ID: 108444283
Gene Symbol: zc3h12b
Alias: si:dkey-286f3.6
Full Name: zinc finger CCCH-type containing 12B
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 32058 bases
Position: chrKV575922.1:38098-70155
Accession: 108444283
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000007224	RNase_Zc3h12a	PF11977.8	2.7e-65	1	1
ENSPNAP00000027607	RNase_Zc3h12a	PF11977.8	2.9e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000002173	-	2565	-	ENSPNAP00000007224	854 (aa)	-	-
ENSPNAT00000002140	-	6735	XM_017725369	ENSPNAP00000027607	891 (aa)	XP_017580858	-

Gene Model

Click here to download ENSPNAG00000002567's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000002567's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000002567	zc3h12b	89	49.292	ENSPNAG00000017483	-	87	49.365

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000002567	zc3h12b	98	66.706	ENSG00000102053	ZC3H12B	91	69.494	Homo_sapiens
ENSPNAG00000002567	zc3h12b	92	77.245	ENSAPOG00000001738	zc3h12b	93	77.503	Acanthochromis_polyacanthus
ENSPNAG00000002567	zc3h12b	76	69.055	ENSAMEG00000006955	ZC3H12B	99	68.855	Ailuropoda_melanoleuca
ENSPNAG00000002567	zc3h12b	92	78.348	ENSACIG00000009787	zc3h12b	93	78.195	Amphilophus_citrinellus
ENSPNAG00000002567	zc3h12b	100	72.494	ENSAOCG00000010094	zc3h12b	93	77.874	Amphiprion_ocellaris
ENSPNAG00000002567	zc3h12b	100	72.383	ENSAPEG00000007479	zc3h12b	93	77.750	Amphiprion_percula
ENSPNAG00000002567	zc3h12b	92	78.025	ENSATEG00000011175	zc3h12b	93	77.874	Anabas_testudineus
ENSPNAG00000002567	zc3h12b	92	71.536	ENSACAG00000013582	ZC3H12B	93	71.250	Anolis_carolinensis
ENSPNAG00000002567	zc3h12b	98	66.824	ENSANAG00000010296	ZC3H12B	91	69.620	Aotus_nancymaae
ENSPNAG00000002567	zc3h12b	100	72.080	ENSACLG00000007669	zc3h12b	93	76.914	Astatotilapia_calliptera
ENSPNAG00000002567	zc3h12b	89	46.479	ENSAMXG00000005320	-	91	46.946	Astyanax_mexicanus
ENSPNAG00000002567	zc3h12b	100	91.648	ENSAMXG00000011328	zc3h12b	88	91.314	Astyanax_mexicanus
ENSPNAG00000002567	zc3h12b	89	45.174	ENSAMXG00000038308	-	86	45.431	Astyanax_mexicanus
ENSPNAG00000002567	zc3h12b	98	65.541	ENSBTAG00000002206	ZC3H12B	92	69.153	Bos_taurus
ENSPNAG00000002567	zc3h12b	98	66.824	ENSCJAG00000001427	ZC3H12B	91	69.367	Callithrix_jacchus
ENSPNAG00000002567	zc3h12b	98	65.217	ENSCAFG00000031307	ZC3H12B	91	68.147	Canis_familiaris
ENSPNAG00000002567	zc3h12b	98	65.217	ENSCAFG00020017995	ZC3H12B	91	68.147	Canis_lupus_dingo
ENSPNAG00000002567	zc3h12b	71	67.915	ENSCHIG00000011723	ZC3H12B	98	67.652	Capra_hircus
ENSPNAG00000002567	zc3h12b	97	67.063	ENSTSYG00000011302	ZC3H12B	91	69.455	Carlito_syrichta
ENSPNAG00000002567	zc3h12b	74	62.871	ENSCAPG00000000650	ZC3H12B	100	62.579	Cavia_aperea
ENSPNAG00000002567	zc3h12b	98	66.706	ENSCCAG00000030171	ZC3H12B	91	69.582	Cebus_capucinus
ENSPNAG00000002567	zc3h12b	98	66.824	ENSCATG00000044845	ZC3H12B	91	69.620	Cercocebus_atys
ENSPNAG00000002567	zc3h12b	98	66.121	ENSCLAG00000003600	ZC3H12B	91	68.987	Chinchilla_lanigera
ENSPNAG00000002567	zc3h12b	92	73.192	ENSCPBG00000006983	ZC3H12B	93	72.909	Chrysemys_picta_bellii
ENSPNAG00000002567	zc3h12b	98	66.588	ENSCANG00000006746	ZC3H12B	91	69.367	Colobus_angolensis_palliatus
ENSPNAG00000002567	zc3h12b	98	66.002	ENSCGRG00001018643	Zc3h12b	92	68.687	Cricetulus_griseus_chok1gshd
ENSPNAG00000002567	zc3h12b	98	66.002	ENSCGRG00000015623	Zc3h12b	92	68.687	Cricetulus_griseus_crigri
ENSPNAG00000002567	zc3h12b	92	76.049	ENSCSEG00000013686	zc3h12b	94	75.278	Cynoglossus_semilaevis
ENSPNAG00000002567	zc3h12b	92	77.037	ENSCVAG00000010473	zc3h12b	92	76.885	Cyprinodon_variegatus
ENSPNAG00000002567	zc3h12b	92	87.394	ENSDARG00000062463	zc3h12b	97	87.363	Danio_rerio
ENSPNAG00000002567	zc3h12b	98	63.232	ENSDNOG00000038439	ZC3H12B	91	66.624	Dasypus_novemcinctus
ENSPNAG00000002567	zc3h12b	98	66.357	ENSDORG00000024832	Zc3h12b	92	69.406	Dipodomys_ordii
ENSPNAG00000002567	zc3h12b	92	56.582	ENSETEG00000012095	ZC3H12B	92	56.450	Echinops_telfairi
ENSPNAG00000002567	zc3h12b	98	62.646	ENSEASG00005006995	ZC3H12B	91	65.272	Equus_asinus_asinus
ENSPNAG00000002567	zc3h12b	98	66.628	ENSECAG00000020993	ZC3H12B	91	69.494	Equus_caballus
ENSPNAG00000002567	zc3h12b	93	78.319	ENSELUG00000010689	zc3h12b	82	78.598	Esox_lucius
ENSPNAG00000002567	zc3h12b	98	65.416	ENSFCAG00000032299	ZC3H12B	91	68.314	Felis_catus
ENSPNAG00000002567	zc3h12b	98	66.121	ENSFDAG00000014258	ZC3H12B	91	68.774	Fukomys_damarensis
ENSPNAG00000002567	zc3h12b	100	71.920	ENSFHEG00000002391	zc3h12b	92	76.355	Fundulus_heteroclitus
ENSPNAG00000002567	zc3h12b	56	76.451	ENSFHEG00000014717	-	74	73.567	Fundulus_heteroclitus
ENSPNAG00000002567	zc3h12b	92	72.285	ENSGALG00000039391	ZC3H12B	93	71.875	Gallus_gallus
ENSPNAG00000002567	zc3h12b	58	72.816	ENSGAFG00000004701	-	58	72.293	Gambusia_affinis
ENSPNAG00000002567	zc3h12b	92	76.810	ENSGAFG00000006871	zc3h12b	92	76.658	Gambusia_affinis
ENSPNAG00000002567	zc3h12b	92	71.393	ENSGACG00000020334	zc3h12b	94	75.972	Gasterosteus_aculeatus
ENSPNAG00000002567	zc3h12b	92	72.818	ENSGAGG00000005569	ZC3H12B	93	72.534	Gopherus_agassizii
ENSPNAG00000002567	zc3h12b	98	66.824	ENSGGOG00000024638	ZC3H12B	91	69.620	Gorilla_gorilla
ENSPNAG00000002567	zc3h12b	100	71.858	ENSHBUG00000000645	zc3h12b	93	76.790	Haplochromis_burtoni
ENSPNAG00000002567	zc3h12b	98	65.771	ENSHGLG00000003107	ZC3H12B	92	68.434	Heterocephalus_glaber_female
ENSPNAG00000002567	zc3h12b	98	65.771	ENSHGLG00100010721	ZC3H12B	92	68.434	Heterocephalus_glaber_male
ENSPNAG00000002567	zc3h12b	96	74.584	ENSHCOG00000008487	zc3h12b	94	76.391	Hippocampus_comes
ENSPNAG00000002567	zc3h12b	92	88.916	ENSIPUG00000016745	zc3h12b	83	88.554	Ictalurus_punctatus
ENSPNAG00000002567	zc3h12b	94	46.988	ENSIPUG00000014830	-	87	48.176	Ictalurus_punctatus
ENSPNAG00000002567	zc3h12b	98	66.979	ENSSTOG00000020962	ZC3H12B	91	69.747	Ictidomys_tridecemlineatus
ENSPNAG00000002567	zc3h12b	98	63.892	ENSJJAG00000015755	Zc3h12b	92	67.045	Jaculus_jaculus
ENSPNAG00000002567	zc3h12b	92	76.876	ENSKMAG00000004921	zc3h12b	93	76.914	Kryptolebias_marmoratus
ENSPNAG00000002567	zc3h12b	92	77.805	ENSLBEG00000006448	zc3h12b	93	77.778	Labrus_bergylta
ENSPNAG00000002567	zc3h12b	92	73.006	ENSLACG00000014526	ZC3H12B	93	72.593	Latimeria_chalumnae
ENSPNAG00000002567	zc3h12b	99	72.067	ENSLOCG00000014631	zc3h12b	82	76.933	Lepisosteus_oculatus
ENSPNAG00000002567	zc3h12b	94	52.814	ENSLOCG00000010717	-	86	52.210	Lepisosteus_oculatus
ENSPNAG00000002567	zc3h12b	96	65.914	ENSLAFG00000014891	ZC3H12B	91	67.929	Loxodonta_africana
ENSPNAG00000002567	zc3h12b	98	66.588	ENSMFAG00000042237	ZC3H12B	91	69.455	Macaca_fascicularis
ENSPNAG00000002567	zc3h12b	98	66.706	ENSMMUG00000012261	ZC3H12B	91	69.494	Macaca_mulatta
ENSPNAG00000002567	zc3h12b	98	66.706	ENSMNEG00000043003	ZC3H12B	91	69.494	Macaca_nemestrina
ENSPNAG00000002567	zc3h12b	98	66.824	ENSMLEG00000042630	ZC3H12B	91	69.620	Mandrillus_leucophaeus
ENSPNAG00000002567	zc3h12b	92	77.654	ENSMAMG00000011770	zc3h12b	93	77.627	Mastacembelus_armatus
ENSPNAG00000002567	zc3h12b	100	72.080	ENSMZEG00005007548	zc3h12b	93	76.914	Maylandia_zebra
ENSPNAG00000002567	zc3h12b	92	72.841	ENSMGAG00000000759	ZC3H12B	92	72.431	Meleagris_gallopavo
ENSPNAG00000002567	zc3h12b	97	65.957	ENSMAUG00000017800	Zc3h12b	91	68.687	Mesocricetus_auratus
ENSPNAG00000002567	zc3h12b	98	66.862	ENSMICG00000010697	ZC3H12B	91	69.620	Microcebus_murinus
ENSPNAG00000002567	zc3h12b	97	65.248	ENSMOCG00000000094	Zc3h12b	92	67.503	Microtus_ochrogaster
ENSPNAG00000002567	zc3h12b	99	70.111	ENSMMOG00000008734	zc3h12b	93	76.750	Mola_mola
ENSPNAG00000002567	zc3h12b	91	69.000	ENSMODG00000005206	ZC3H12B	93	69.000	Monodelphis_domestica
ENSPNAG00000002567	zc3h12b	67	66.849	ENSMALG00000016807	-	81	61.538	Monopterus_albus
ENSPNAG00000002567	zc3h12b	99	67.956	ENSMALG00000021153	zc3h12b	95	74.564	Monopterus_albus
ENSPNAG00000002567	zc3h12b	98	65.018	ENSMUSG00000035045	Zc3h12b	66	97.143	Mus_musculus
ENSPNAG00000002567	zc3h12b	98	64.603	MGP_PahariEiJ_G0031787	Zc3h12b	91	67.884	Mus_pahari
ENSPNAG00000002567	zc3h12b	98	65.018	MGP_SPRETEiJ_G0034413	Zc3h12b	91	68.010	Mus_spretus
ENSPNAG00000002567	zc3h12b	98	64.277	ENSMPUG00000001162	ZC3H12B	91	67.300	Mustela_putorius_furo
ENSPNAG00000002567	zc3h12b	98	65.222	ENSMLUG00000013635	ZC3H12B	94	68.861	Myotis_lucifugus
ENSPNAG00000002567	zc3h12b	100	72.080	ENSNBRG00000014889	zc3h12b	93	77.037	Neolamprologus_brichardi
ENSPNAG00000002567	zc3h12b	97	66.903	ENSNLEG00000000383	ZC3H12B	91	69.620	Nomascus_leucogenys
ENSPNAG00000002567	zc3h12b	91	65.063	ENSMEUG00000014075	ZC3H12B	93	64.430	Notamacropus_eugenii
ENSPNAG00000002567	zc3h12b	92	77.094	ENSONIG00000012867	zc3h12b	94	76.942	Oreochromis_niloticus
ENSPNAG00000002567	zc3h12b	98	66.939	ENSOCUG00000006130	ZC3H12B	90	80.769	Oryctolagus_cuniculus
ENSPNAG00000002567	zc3h12b	65	66.022	ENSORLG00000009188	-	68	63.472	Oryzias_latipes
ENSPNAG00000002567	zc3h12b	93	77.612	ENSORLG00000009556	zc3h12b	93	78.043	Oryzias_latipes
ENSPNAG00000002567	zc3h12b	93	76.471	ENSORLG00020021793	zc3h12b	93	76.885	Oryzias_latipes_hni
ENSPNAG00000002567	zc3h12b	65	66.022	ENSORLG00020019033	-	92	65.385	Oryzias_latipes_hni
ENSPNAG00000002567	zc3h12b	93	76.716	ENSORLG00015004818	zc3h12b	93	77.132	Oryzias_latipes_hsok
ENSPNAG00000002567	zc3h12b	62	68.657	ENSORLG00015020619	-	97	65.000	Oryzias_latipes_hsok
ENSPNAG00000002567	zc3h12b	62	71.856	ENSOMEG00000018642	-	61	70.468	Oryzias_melastigma
ENSPNAG00000002567	zc3h12b	93	76.838	ENSOMEG00000005768	zc3h12b	93	77.132	Oryzias_melastigma
ENSPNAG00000002567	zc3h12b	98	66.511	ENSOGAG00000029439	ZC3H12B	91	69.231	Otolemur_garnettii
ENSPNAG00000002567	zc3h12b	98	65.578	ENSOARG00000004959	ZC3H12B	91	69.202	Ovis_aries
ENSPNAG00000002567	zc3h12b	98	66.706	ENSPPAG00000039530	ZC3H12B	91	69.494	Pan_paniscus
ENSPNAG00000002567	zc3h12b	77	68.533	ENSPPRG00000004966	-	95	68.030	Panthera_pardus
ENSPNAG00000002567	zc3h12b	76	69.008	ENSPTIG00000005571	ZC3H12B	99	68.502	Panthera_tigris_altaica
ENSPNAG00000002567	zc3h12b	98	66.706	ENSPTRG00000021969	ZC3H12B	91	69.494	Pan_troglodytes
ENSPNAG00000002567	zc3h12b	98	66.824	ENSPANG00000007944	ZC3H12B	91	69.620	Papio_anubis
ENSPNAG00000002567	zc3h12b	92	74.816	ENSPKIG00000019893	ZC3H12B	94	74.908	Paramormyrops_kingsleyae
ENSPNAG00000002567	zc3h12b	87	45.887	ENSPKIG00000012595	-	80	46.272	Paramormyrops_kingsleyae
ENSPNAG00000002567	zc3h12b	92	71.128	ENSPKIG00000012946	zc3h12b	94	71.108	Paramormyrops_kingsleyae
ENSPNAG00000002567	zc3h12b	97	70.809	ENSPSIG00000016853	ZC3H12B	93	73.467	Pelodiscus_sinensis
ENSPNAG00000002567	zc3h12b	92	77.000	ENSPMGG00000006009	zc3h12b	93	77.096	Periophthalmus_magnuspinnatus
ENSPNAG00000002567	zc3h12b	91	69.424	ENSPCIG00000020264	ZC3H12B	92	69.424	Phascolarctos_cinereus
ENSPNAG00000002567	zc3h12b	92	76.933	ENSPFOG00000019365	zc3h12b	93	76.781	Poecilia_formosa
ENSPNAG00000002567	zc3h12b	92	77.178	ENSPLAG00000011981	zc3h12b	92	73.587	Poecilia_latipinna
ENSPNAG00000002567	zc3h12b	92	73.497	ENSPMEG00000002552	zc3h12b	92	73.342	Poecilia_mexicana
ENSPNAG00000002567	zc3h12b	92	76.578	ENSPREG00000020794	zc3h12b	92	76.549	Poecilia_reticulata
ENSPNAG00000002567	zc3h12b	98	62.322	ENSPPYG00000020416	ZC3H12B	89	80.769	Pongo_abelii
ENSPNAG00000002567	zc3h12b	98	58.657	ENSPCAG00000016422	ZC3H12B	74	85.352	Procavia_capensis
ENSPNAG00000002567	zc3h12b	98	66.979	ENSPCOG00000020467	ZC3H12B	91	69.747	Propithecus_coquereli
ENSPNAG00000002567	zc3h12b	98	56.722	ENSPVAG00000017352	ZC3H12B	92	58.450	Pteropus_vampyrus
ENSPNAG00000002567	zc3h12b	100	72.303	ENSPNYG00000018012	zc3h12b	93	77.037	Pundamilia_nyererei
ENSPNAG00000002567	zc3h12b	97	65.444	ENSRNOG00000011508	Zc3h12b	79	81.154	Rattus_norvegicus
ENSPNAG00000002567	zc3h12b	98	66.706	ENSRBIG00000036402	ZC3H12B	91	69.494	Rhinopithecus_bieti
ENSPNAG00000002567	zc3h12b	98	66.706	ENSRROG00000036004	ZC3H12B	91	69.494	Rhinopithecus_roxellana
ENSPNAG00000002567	zc3h12b	98	66.824	ENSSBOG00000004095	ZC3H12B	91	69.620	Saimiri_boliviensis_boliviensis
ENSPNAG00000002567	zc3h12b	91	68.335	ENSSHAG00000006530	ZC3H12B	92	68.335	Sarcophilus_harrisii
ENSPNAG00000002567	zc3h12b	97	72.061	ENSSFOG00015012866	ZC3H12B	92	74.356	Scleropages_formosus
ENSPNAG00000002567	zc3h12b	92	75.589	ENSSFOG00015008769	zc3h12b	93	75.622	Scleropages_formosus
ENSPNAG00000002567	zc3h12b	100	72.636	ENSSMAG00000018309	zc3h12b	93	77.037	Scophthalmus_maximus
ENSPNAG00000002567	zc3h12b	92	78.868	ENSSDUG00000014078	zc3h12b	93	78.841	Seriola_dumerili
ENSPNAG00000002567	zc3h12b	100	72.383	ENSSLDG00000018895	zc3h12b	93	77.998	Seriola_lalandi_dorsalis
ENSPNAG00000002567	zc3h12b	97	49.341	ENSSARG00000002292	ZC3H12B	92	50.704	Sorex_araneus
ENSPNAG00000002567	zc3h12b	91	68.679	ENSSPUG00000014175	ZC3H12B	96	68.514	Sphenodon_punctatus
ENSPNAG00000002567	zc3h12b	100	72.414	ENSSPAG00000022460	zc3h12b	93	77.874	Stegastes_partitus
ENSPNAG00000002567	zc3h12b	98	66.278	ENSSSCG00000012367	ZC3H12B	91	69.823	Sus_scrofa
ENSPNAG00000002567	zc3h12b	92	71.747	ENSTGUG00000002846	ZC3H12B	93	71.660	Taeniopygia_guttata
ENSPNAG00000002567	zc3h12b	92	75.398	ENSTRUG00000012186	zc3h12b	98	75.430	Takifugu_rubripes
ENSPNAG00000002567	zc3h12b	93	72.070	ENSTNIG00000011828	zc3h12b	94	77.433	Tetraodon_nigroviridis
ENSPNAG00000002567	zc3h12b	89	59.481	ENSTBEG00000011540	ZC3H12B	84	68.659	Tupaia_belangeri
ENSPNAG00000002567	zc3h12b	77	80.488	ENSTTRG00000007468	ZC3H12B	76	80.488	Tursiops_truncatus
ENSPNAG00000002567	zc3h12b	98	64.452	ENSUAMG00000005098	ZC3H12B	91	67.595	Ursus_americanus
ENSPNAG00000002567	zc3h12b	98	64.452	ENSUMAG00000017054	ZC3H12B	91	67.595	Ursus_maritimus
ENSPNAG00000002567	zc3h12b	98	59.788	ENSVPAG00000009070	ZC3H12B	92	62.356	Vicugna_pacos
ENSPNAG00000002567	zc3h12b	98	65.416	ENSVVUG00000022686	ZC3H12B	91	68.056	Vulpes_vulpes
ENSPNAG00000002567	zc3h12b	100	60.860	ENSXETG00000017794	zc3h12b	92	65.757	Xenopus_tropicalis
ENSPNAG00000002567	zc3h12b	92	78.436	ENSXCOG00000006151	zc3h12b	92	78.283	Xiphophorus_couchianus
ENSPNAG00000002567	zc3h12b	58	75.667	ENSXCOG00000007996	-	84	69.295	Xiphophorus_couchianus
ENSPNAG00000002567	zc3h12b	92	76.699	ENSXMAG00000018548	zc3h12b	92	76.549	Xiphophorus_maculatus