EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000002784 (Gene tree)
Gene ID: 108428021
Gene Symbol: hnrnph1l
Alias: fb19a06|wu:fb19a06|zgc:55399|zgc:85960
Full Name: heterogeneous nuclear ribonucleoprotein H-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 8270 bases
Position: chrKV575343.1:2245765-2254034
Accession: 108428021
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000027930	zf-RNPHF	PF08080.12	6.7e-08	1	1
ENSPNAP00000007790	zf-RNPHF	PF08080.12	7.6e-07	1	1
ENSPNAP00000027930	RRM_1	PF00076.22	3.3e-31	1	3
ENSPNAP00000027930	RRM_1	PF00076.22	3.3e-31	2	3
ENSPNAP00000027930	RRM_1	PF00076.22	3.3e-31	3	3
ENSPNAP00000007790	RRM_1	PF00076.22	5.5e-31	1	3
ENSPNAP00000007790	RRM_1	PF00076.22	5.5e-31	2	3
ENSPNAP00000007790	RRM_1	PF00076.22	5.5e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000001284	-	1092	-	ENSPNAP00000027930	363 (aa)	-	-
ENSPNAT00000001255	-	1968	XM_017698694	ENSPNAP00000007790	408 (aa)	XP_017554183	UPI000814B06F

Gene Model

Click here to download ENSPNAG00000002784's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000002784's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000002784	hnrnph1l	94	42.941	ENSPNAG00000014912	grsf1	72	44.545
ENSPNAG00000002784	hnrnph1l	95	57.838	ENSPNAG00000000466	hnrnph3	97	58.673
ENSPNAG00000002784	hnrnph1l	98	87.080	ENSPNAG00000000439	hnrnph1	100	86.441

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000002784	hnrnph1l	99	83.824	ENSAPOG00000016614	hnrnph1	99	84.597	Acanthochromis_polyacanthus
ENSPNAG00000002784	hnrnph1l	98	84.034	ENSACIG00000008964	hnrnph1	97	87.500	Amphilophus_citrinellus
ENSPNAG00000002784	hnrnph1l	99	84.069	ENSAOCG00000008372	hnrnph1	99	84.841	Amphiprion_ocellaris
ENSPNAG00000002784	hnrnph1l	99	83.824	ENSAPEG00000012980	hnrnph1	99	84.597	Amphiprion_percula
ENSPNAG00000002784	hnrnph1l	99	83.824	ENSATEG00000002792	hnrnph1	99	84.597	Anabas_testudineus
ENSPNAG00000002784	hnrnph1l	99	75.936	ENSACAG00000016323	-	99	71.302	Anolis_carolinensis
ENSPNAG00000002784	hnrnph1l	99	83.060	ENSACLG00000003313	hnrnph1	98	82.927	Astatotilapia_calliptera
ENSPNAG00000002784	hnrnph1l	100	82.651	ENSAMXG00000002483	hnrnph1	99	87.599	Astyanax_mexicanus
ENSPNAG00000002784	hnrnph1l	99	94.840	ENSAMXG00000030703	hnrnph1l	85	94.840	Astyanax_mexicanus
ENSPNAG00000002784	hnrnph1l	93	88.654	ENSCSEG00000015891	hnrnph1	99	85.122	Cynoglossus_semilaevis
ENSPNAG00000002784	hnrnph1l	99	82.801	ENSCVAG00000014097	hnrnph1	99	83.863	Cyprinodon_variegatus
ENSPNAG00000002784	hnrnph1l	96	89.848	ENSDARG00000005551	hnrnph1l	100	89.051	Danio_rerio
ENSPNAG00000002784	hnrnph1l	98	87.863	ENSDARG00000040881	hnrnph1	100	85.680	Danio_rerio
ENSPNAG00000002784	hnrnph1l	98	84.765	ENSELUG00000006715	hnrnph1	100	78.960	Esox_lucius
ENSPNAG00000002784	hnrnph1l	93	86.877	ENSELUG00000021437	-	99	89.501	Esox_lucius
ENSPNAG00000002784	hnrnph1l	99	82.801	ENSFHEG00000008474	hnrnph1	99	83.863	Fundulus_heteroclitus
ENSPNAG00000002784	hnrnph1l	98	80.441	ENSGMOG00000006782	hnrnph1	99	80.100	Gadus_morhua
ENSPNAG00000002784	hnrnph1l	99	82.555	ENSGAFG00000006280	hnrnph1	99	83.619	Gambusia_affinis
ENSPNAG00000002784	hnrnph1l	98	79.832	ENSGACG00000018352	hnrnph1	99	78.986	Gasterosteus_aculeatus
ENSPNAG00000002784	hnrnph1l	98	84.078	ENSHBUG00000010547	hnrnph1	97	83.934	Haplochromis_burtoni
ENSPNAG00000002784	hnrnph1l	97	82.768	ENSHCOG00000004513	hnrnph1	99	77.962	Hippocampus_comes
ENSPNAG00000002784	hnrnph1l	100	81.687	ENSIPUG00000018262	hnrnph1	100	85.472	Ictalurus_punctatus
ENSPNAG00000002784	hnrnph1l	100	92.157	ENSIPUG00000024047	hnrnph1l	97	93.382	Ictalurus_punctatus
ENSPNAG00000002784	hnrnph1l	98	82.913	ENSKMAG00000018802	hnrnph1	99	82.282	Kryptolebias_marmoratus
ENSPNAG00000002784	hnrnph1l	99	83.333	ENSLBEG00000027811	hnrnph1	99	84.108	Labrus_bergylta
ENSPNAG00000002784	hnrnph1l	99	80.835	ENSLOCG00000012510	hnrnph1	100	73.561	Lepisosteus_oculatus
ENSPNAG00000002784	hnrnph1l	99	54.907	ENSMMUG00000017392	-	98	53.917	Macaca_mulatta
ENSPNAG00000002784	hnrnph1l	99	55.438	ENSMNEG00000030544	-	98	51.919	Macaca_nemestrina
ENSPNAG00000002784	hnrnph1l	99	82.038	ENSMAMG00000011478	hnrnph1	99	81.941	Mastacembelus_armatus
ENSPNAG00000002784	hnrnph1l	99	83.292	ENSMZEG00005009791	hnrnph1	99	84.352	Maylandia_zebra
ENSPNAG00000002784	hnrnph1l	97	83.286	ENSMMOG00000009064	hnrnph1	98	83.684	Mola_mola
ENSPNAG00000002784	hnrnph1l	79	52.303	ENSMODG00000002200	-	99	51.940	Monodelphis_domestica
ENSPNAG00000002784	hnrnph1l	99	83.702	ENSMALG00000003999	hnrnph1	99	84.401	Monopterus_albus
ENSPNAG00000002784	hnrnph1l	98	84.078	ENSNBRG00000015406	hnrnph1	99	83.934	Neolamprologus_brichardi
ENSPNAG00000002784	hnrnph1l	99	83.538	ENSONIG00000017754	hnrnph1	99	84.597	Oreochromis_niloticus
ENSPNAG00000002784	hnrnph1l	98	82.633	ENSORLG00000006932	hnrnph1	99	82.169	Oryzias_latipes
ENSPNAG00000002784	hnrnph1l	98	82.633	ENSORLG00020007881	hnrnph1	99	81.928	Oryzias_latipes_hni
ENSPNAG00000002784	hnrnph1l	98	82.633	ENSORLG00015005306	hnrnph1	99	82.169	Oryzias_latipes_hsok
ENSPNAG00000002784	hnrnph1l	99	82.885	ENSOMEG00000009827	hnrnph1	98	86.472	Oryzias_melastigma
ENSPNAG00000002784	hnrnph1l	98	82.967	ENSPKIG00000009532	-	100	78.899	Paramormyrops_kingsleyae
ENSPNAG00000002784	hnrnph1l	100	86.650	ENSPKIG00000018203	hnrnph1l	100	86.650	Paramormyrops_kingsleyae
ENSPNAG00000002784	hnrnph1l	93	87.335	ENSPMGG00000012151	hnrnph1	99	84.597	Periophthalmus_magnuspinnatus
ENSPNAG00000002784	hnrnph1l	99	82.555	ENSPFOG00000004097	hnrnph1	99	83.619	Poecilia_formosa
ENSPNAG00000002784	hnrnph1l	99	82.555	ENSPLAG00000011771	hnrnph1	99	83.619	Poecilia_latipinna
ENSPNAG00000002784	hnrnph1l	99	82.801	ENSPMEG00000019446	hnrnph1	99	83.863	Poecilia_mexicana
ENSPNAG00000002784	hnrnph1l	99	82.801	ENSPREG00000005780	hnrnph1	99	83.863	Poecilia_reticulata
ENSPNAG00000002784	hnrnph1l	99	83.292	ENSPNYG00000000204	hnrnph1	99	84.352	Pundamilia_nyererei
ENSPNAG00000002784	hnrnph1l	98	84.225	ENSSFOG00015016055	-	96	86.445	Scleropages_formosus
ENSPNAG00000002784	hnrnph1l	97	86.935	ENSSFOG00015022796	hnrnph1l	100	86.165	Scleropages_formosus
ENSPNAG00000002784	hnrnph1l	98	83.989	ENSSMAG00000007820	hnrnph1	96	83.120	Scophthalmus_maximus
ENSPNAG00000002784	hnrnph1l	99	84.069	ENSSDUG00000008785	hnrnph1	99	84.841	Seriola_dumerili
ENSPNAG00000002784	hnrnph1l	99	84.069	ENSSLDG00000010685	hnrnph1	99	84.841	Seriola_lalandi_dorsalis
ENSPNAG00000002784	hnrnph1l	98	84.034	ENSSPAG00000009921	hnrnph1	99	84.841	Stegastes_partitus
ENSPNAG00000002784	hnrnph1l	99	82.555	ENSTRUG00000020069	hnrnph1	99	84.108	Takifugu_rubripes
ENSPNAG00000002784	hnrnph1l	98	76.648	ENSXETG00000018321	hnrnph1	99	70.548	Xenopus_tropicalis
ENSPNAG00000002784	hnrnph1l	98	83.565	ENSXCOG00000009133	hnrnph1	96	81.586	Xiphophorus_couchianus
ENSPNAG00000002784	hnrnph1l	98	83.427	ENSXMAG00000021332	hnrnph1	98	86.702	Xiphophorus_maculatus