EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPNAG00000002889 (Gene tree)
Gene ID
108435270
Gene Symbol
rbfox3a
Alias
rbfox3
Full Name
RNA binding protein fox-1 homolog 3-like
Gene Type
protein_coding
Species
Pygocentrus_nattereri
Status
putative
Strand
Minus strand
Length
277875 bases
Position
chrKV575463.1:1202883-1480757
Accession
108435270
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPNAP00000007997Fox-1_CPF12414.82e-4511
ENSPNAP00000008035Fox-1_CPF12414.82.1e-4511
ENSPNAP00000008021Fox-1_CPF12414.82.2e-4511
ENSPNAP00000008029Fox-1_CPF12414.82.4e-4511
ENSPNAP00000007977Fox-1_CPF12414.82.1e-2511
ENSPNAP00000007997RRM_1PF00076.221.1e-1811
ENSPNAP00000008029RRM_1PF00076.222.2e-1811
ENSPNAP00000008035RRM_1PF00076.222.2e-1811
ENSPNAP00000007977RRM_1PF00076.220.0002611
ENSPNAP00000008021RRM_1PF00076.220.0002711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPNAT00000000841-6028-ENSPNAP00000008029368 (aa)--
ENSPNAT00000000940-981-ENSPNAP00000007977326 (aa)--
ENSPNAT00000000825-5748XM_017710997ENSPNAP00000008035373 (aa)XP_017566486UPI000814994D
ENSPNAT00000000889-3761XM_017710998ENSPNAP00000007997382 (aa)XP_017566487UPI0008147AB4
ENSPNAT00000000861-5935-ENSPNAP00000008021337 (aa)--
Gene Model
Click here to download ENSPNAG00000002889's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000002889's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPNAG00000002889rbfox3a8063.810ENSPNAG00000001620rbfox1l8061.709
ENSPNAG00000002889rbfox3a9644.628ENSPNAG00000014196-7062.290
ENSPNAG00000002889rbfox3a7990.000ENSPNAG00000018173rbfox3b7596.774
ENSPNAG00000002889rbfox3a8946.984ENSPNAG00000000168rbfox26257.736
ENSPNAG00000002889rbfox3a8570.238ENSPNAG00000023109rbfox19666.111
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPNAG00000002889rbfox3a8182.838ENSG00000167281RBFOX39993.333Homo_sapiens
ENSPNAG00000002889rbfox3a10086.010ENSAPOG00000021630rbfox3b10084.197Acanthochromis_polyacanthus
ENSPNAG00000002889rbfox3a10072.237ENSAPOG00000015658-9271.505Acanthochromis_polyacanthus
ENSPNAG00000002889rbfox3a8978.797ENSAMEG00000014170RBFOX39871.611Ailuropoda_melanoleuca
ENSPNAG00000002889rbfox3a8582.075ENSACIG00000010817rbfox3b85100.000Amphilophus_citrinellus
ENSPNAG00000002889rbfox3a8473.636ENSACIG00000003768-7976.923Amphilophus_citrinellus
ENSPNAG00000002889rbfox3a10085.484ENSAOCG00000012358rbfox3b10083.820Amphiprion_ocellaris
ENSPNAG00000002889rbfox3a10082.796ENSAOCG00000010786-9882.667Amphiprion_ocellaris
ENSPNAG00000002889rbfox3a10077.151ENSAPEG00000019081rbfox3b10075.467Amphiprion_percula
ENSPNAG00000002889rbfox3a7495.833ENSAPEG00000015891-9473.057Amphiprion_percula
ENSPNAG00000002889rbfox3a8180.528ENSATEG00000023101-9380.392Anabas_testudineus
ENSPNAG00000002889rbfox3a8576.437ENSATEG00000019945rbfox3b9676.716Anabas_testudineus
ENSPNAG00000002889rbfox3a9881.148ENSACAG00000016093RBFOX310079.508Anolis_carolinensis
ENSPNAG00000002889rbfox3a8182.508ENSANAG00000023457RBFOX39580.198Aotus_nancymaae
ENSPNAG00000002889rbfox3a10084.140ENSACLG00000025552-10083.871Astatotilapia_calliptera
ENSPNAG00000002889rbfox3a10085.492ENSACLG00000020011rbfox3b10083.679Astatotilapia_calliptera
ENSPNAG00000002889rbfox3a10099.732ENSAMXG00000037246rbfox3a10099.728Astyanax_mexicanus
ENSPNAG00000002889rbfox3a9778.889ENSAMXG00000042841rbfox3b10076.389Astyanax_mexicanus
ENSPNAG00000002889rbfox3a9362.069ENSBTAG00000006280RBFOX39567.085Bos_taurus
ENSPNAG00000002889rbfox3a9362.069ENSCJAG00000009563RBFOX39669.143Callithrix_jacchus
ENSPNAG00000002889rbfox3a6690.909ENSCAFG00000005547RBFOX310079.859Canis_familiaris
ENSPNAG00000002889rbfox3a9362.187ENSCAFG00020008126RBFOX39670.330Canis_lupus_dingo
ENSPNAG00000002889rbfox3a9361.875ENSCHIG00000009124RBFOX39670.330Capra_hircus
ENSPNAG00000002889rbfox3a9365.000ENSTSYG00000029617RBFOX39672.286Carlito_syrichta
ENSPNAG00000002889rbfox3a9363.665ENSCPOG00000021703RBFOX39671.038Cavia_porcellus
ENSPNAG00000002889rbfox3a8182.508ENSCCAG00000028450RBFOX39580.198Cebus_capucinus
ENSPNAG00000002889rbfox3a8182.838ENSCATG00000018349RBFOX39580.528Cercocebus_atys
ENSPNAG00000002889rbfox3a9364.375ENSCLAG00000006449RBFOX39672.802Chinchilla_lanigera
ENSPNAG00000002889rbfox3a8182.838ENSCSAG00000002355RBFOX39580.528Chlorocebus_sabaeus
ENSPNAG00000002889rbfox3a8981.341ENSCPBG00000010904RBFOX39880.466Chrysemys_picta_bellii
ENSPNAG00000002889rbfox3a8182.838ENSCANG00000043120RBFOX39580.528Colobus_angolensis_palliatus
ENSPNAG00000002889rbfox3a8270.137ENSCGRG00001019476Rbfox39670.959Cricetulus_griseus_chok1gshd
ENSPNAG00000002889rbfox3a8270.137ENSCGRG00000003268Rbfox39670.959Cricetulus_griseus_crigri
ENSPNAG00000002889rbfox3a10068.984ENSCSEG00000020606RBFOX310067.380Cynoglossus_semilaevis
ENSPNAG00000002889rbfox3a10083.065ENSCSEG00000015567RBFOX39784.054Cynoglossus_semilaevis
ENSPNAG00000002889rbfox3a10085.411ENSCVAG00000006882rbfox3b10083.820Cyprinodon_variegatus
ENSPNAG00000002889rbfox3a8974.000ENSDARG00000074310rbfox3b9687.565Danio_rerio
ENSPNAG00000002889rbfox3a10097.587ENSDARG00000010083rbfox3a10097.587Danio_rerio
ENSPNAG00000002889rbfox3a7070.915ENSDNOG00000039391RBFOX36593.443Dasypus_novemcinctus
ENSPNAG00000002889rbfox3a8263.085ENSDORG00000005352Rbfox39661.708Dipodomys_ordii
ENSPNAG00000002889rbfox3a7657.823ENSEBUG00000013559RBFOX37160.769Eptatretus_burgeri
ENSPNAG00000002889rbfox3a9865.394ENSEBUG00000002129RBFOX39968.436Eptatretus_burgeri
ENSPNAG00000002889rbfox3a8180.921ENSEASG00005005059RBFOX39580.921Equus_asinus_asinus
ENSPNAG00000002889rbfox3a8180.921ENSECAG00000023811RBFOX39580.921Equus_caballus
ENSPNAG00000002889rbfox3a7385.882ENSEEUG00000013974RBFOX37293.333Erinaceus_europaeus
ENSPNAG00000002889rbfox3a10084.715ENSELUG00000017963rbfox3b10084.321Esox_lucius
ENSPNAG00000002889rbfox3a9881.096ENSFCAG00000002555RBFOX310078.904Felis_catus
ENSPNAG00000002889rbfox3a8967.127ENSFALG00000012288RBFOX39863.275Ficedula_albicollis
ENSPNAG00000002889rbfox3a9358.075ENSFDAG00000007489RBFOX39666.120Fukomys_damarensis
ENSPNAG00000002889rbfox3a8485.017ENSFHEG00000008550rbfox3b9583.026Fundulus_heteroclitus
ENSPNAG00000002889rbfox3a8183.636ENSGMOG00000019304-9970.571Gadus_morhua
ENSPNAG00000002889rbfox3a9882.418ENSGALG00000032889RBFOX310080.220Gallus_gallus
ENSPNAG00000002889rbfox3a10079.310ENSGAFG00000005025rbfox3b10078.515Gambusia_affinis
ENSPNAG00000002889rbfox3a8274.247ENSGACG00000002138-9674.247Gasterosteus_aculeatus
ENSPNAG00000002889rbfox3a9880.952ENSGAGG00000020025RBFOX310080.159Gopherus_agassizii
ENSPNAG00000002889rbfox3a8182.838ENSGGOG00000012546RBFOX39580.528Gorilla_gorilla
ENSPNAG00000002889rbfox3a8984.302ENSHBUG00000023098-9884.012Haplochromis_burtoni
ENSPNAG00000002889rbfox3a10085.492ENSHBUG00000018099rbfox3b10083.679Haplochromis_burtoni
ENSPNAG00000002889rbfox3a9363.272ENSHGLG00000008679RBFOX39670.652Heterocephalus_glaber_female
ENSPNAG00000002889rbfox3a9358.769ENSHGLG00100014739RBFOX39666.033Heterocephalus_glaber_male
ENSPNAG00000002889rbfox3a8176.159ENSHCOG00000001863RBFOX38293.750Hippocampus_comes
ENSPNAG00000002889rbfox3a9873.171ENSHCOG00000007444RBFOX39373.713Hippocampus_comes
ENSPNAG00000002889rbfox3a9854.167ENSIPUG00000021966rbfox3b9877.239Ictalurus_punctatus
ENSPNAG00000002889rbfox3a10095.979ENSIPUG00000012010rbfox3a10095.979Ictalurus_punctatus
ENSPNAG00000002889rbfox3a6094.000ENSSTOG00000026817RBFOX37694.000Ictidomys_tridecemlineatus
ENSPNAG00000002889rbfox3a9362.382ENSJJAG00000014167Rbfox39670.604Jaculus_jaculus
ENSPNAG00000002889rbfox3a10085.411ENSKMAG00000006726rbfox3b10083.820Kryptolebias_marmoratus
ENSPNAG00000002889rbfox3a10086.010ENSLBEG00000004030rbfox3b10084.197Labrus_bergylta
ENSPNAG00000002889rbfox3a10087.798ENSLBEG00000022508-10086.828Labrus_bergylta
ENSPNAG00000002889rbfox3a8872.829ENSLACG00000018409-10068.766Latimeria_chalumnae
ENSPNAG00000002889rbfox3a8892.097ENSLOCG00000012267rbfox3a9892.097Lepisosteus_oculatus
ENSPNAG00000002889rbfox3a8977.159ENSLAFG00000016623RBFOX39872.911Loxodonta_africana
ENSPNAG00000002889rbfox3a9360.127ENSMFAG00000002247RBFOX39669.429Macaca_fascicularis
ENSPNAG00000002889rbfox3a8182.838ENSMMUG00000023028RBFOX38691.667Macaca_mulatta
ENSPNAG00000002889rbfox3a8182.508ENSMNEG00000041147RBFOX39580.198Macaca_nemestrina
ENSPNAG00000002889rbfox3a8182.838ENSMLEG00000025686RBFOX39580.528Mandrillus_leucophaeus
ENSPNAG00000002889rbfox3a8981.818ENSMAMG00000020600-9978.151Mastacembelus_armatus
ENSPNAG00000002889rbfox3a8578.616ENSMAMG00000019810rbfox3b84100.000Mastacembelus_armatus
ENSPNAG00000002889rbfox3a10085.492ENSMZEG00005000781rbfox3b10083.679Maylandia_zebra
ENSPNAG00000002889rbfox3a8364.118ENSMZEG00005003055-5390.984Maylandia_zebra
ENSPNAG00000002889rbfox3a6077.232ENSMGAG00000005600RBFOX38378.027Meleagris_gallopavo
ENSPNAG00000002889rbfox3a9363.438ENSMAUG00000013543Rbfox39671.978Mesocricetus_auratus
ENSPNAG00000002889rbfox3a8881.155ENSMICG00000014898RBFOX39680.528Microcebus_murinus
ENSPNAG00000002889rbfox3a9364.062ENSMOCG00000015373Rbfox39672.527Microtus_ochrogaster
ENSPNAG00000002889rbfox3a10083.641ENSMMOG00000020193rbfox3b10082.850Mola_mola
ENSPNAG00000002889rbfox3a9878.571ENSMODG00000002089RBFOX310078.571Monodelphis_domestica
ENSPNAG00000002889rbfox3a10086.737ENSMALG00000018270-10086.269Monopterus_albus
ENSPNAG00000002889rbfox3a10084.615ENSMALG00000020407rbfox3b10083.024Monopterus_albus
ENSPNAG00000002889rbfox3a8283.281MGP_CAROLIEiJ_G0017487Rbfox39691.367Mus_caroli
ENSPNAG00000002889rbfox3a8283.281ENSMUSG00000025576Rbfox39691.367Mus_musculus
ENSPNAG00000002889rbfox3a8281.132MGP_PahariEiJ_G0018614Rbfox39692.086Mus_pahari
ENSPNAG00000002889rbfox3a8283.596MGP_SPRETEiJ_G0018331Rbfox39691.367Mus_spretus
ENSPNAG00000002889rbfox3a8975.457ENSMPUG00000012319RBFOX39972.987Mustela_putorius_furo
ENSPNAG00000002889rbfox3a9364.688ENSNGAG00000018006Rbfox39673.077Nannospalax_galili
ENSPNAG00000002889rbfox3a7497.059ENSNBRG00000022885-7596.970Neolamprologus_brichardi
ENSPNAG00000002889rbfox3a10084.085ENSNBRG00000010102rbfox3b10083.289Neolamprologus_brichardi
ENSPNAG00000002889rbfox3a5892.857ENSNLEG00000000153-7692.857Nomascus_leucogenys
ENSPNAG00000002889rbfox3a7987.500ENSMEUG00000004218-7589.655Notamacropus_eugenii
ENSPNAG00000002889rbfox3a6886.885ENSOPRG00000016279-7186.885Ochotona_princeps
ENSPNAG00000002889rbfox3a8183.168ENSODEG00000009433RBFOX39583.168Octodon_degus
ENSPNAG00000002889rbfox3a9082.596ENSONIG00000007282-9882.301Oreochromis_niloticus
ENSPNAG00000002889rbfox3a10085.411ENSONIG00000009549rbfox3b10083.820Oreochromis_niloticus
ENSPNAG00000002889rbfox3a10085.676ENSORLG00000000905rbfox3b7983.065Oryzias_latipes
ENSPNAG00000002889rbfox3a10085.676ENSORLG00020018030rbfox3b9983.065Oryzias_latipes_hni
ENSPNAG00000002889rbfox3a10085.411ENSORLG00015009200rbfox3b10083.289Oryzias_latipes_hsok
ENSPNAG00000002889rbfox3a8080.251ENSOMEG00000014677rbfox3b8679.762Oryzias_melastigma
ENSPNAG00000002889rbfox3a8982.282ENSOGAG00000029595RBFOX39874.731Otolemur_garnettii
ENSPNAG00000002889rbfox3a8861.494ENSOARG00000002908RBFOX310057.398Ovis_aries
ENSPNAG00000002889rbfox3a6881.323ENSPPAG00000025383RBFOX38881.323Pan_paniscus
ENSPNAG00000002889rbfox3a9364.331ENSPPRG00000007819RBFOX39670.349Panthera_pardus
ENSPNAG00000002889rbfox3a8182.838ENSPTRG00000009727RBFOX39580.528Pan_troglodytes
ENSPNAG00000002889rbfox3a8182.838ENSPANG00000019837RBFOX39580.528Papio_anubis
ENSPNAG00000002889rbfox3a9866.578ENSPKIG00000022633-10063.830Paramormyrops_kingsleyae
ENSPNAG00000002889rbfox3a10091.777ENSPKIG00000010299rbfox3a9690.323Paramormyrops_kingsleyae
ENSPNAG00000002889rbfox3a8781.098ENSPMGG00000008000rbfox3b10082.317Periophthalmus_magnuspinnatus
ENSPNAG00000002889rbfox3a9364.375ENSPEMG00000010500Rbfox39672.802Peromyscus_maniculatus_bairdii
ENSPNAG00000002889rbfox3a5077.941ENSPMAG00000008689rbfox3b9979.902Petromyzon_marinus
ENSPNAG00000002889rbfox3a9870.560ENSPCIG00000005766RBFOX39577.860Phascolarctos_cinereus
ENSPNAG00000002889rbfox3a10085.411ENSPFOG00000018294rbfox3b9683.820Poecilia_formosa
ENSPNAG00000002889rbfox3a6888.031ENSPLAG00000000481rbfox3b7985.328Poecilia_latipinna
ENSPNAG00000002889rbfox3a8485.017ENSPMEG00000022997rbfox3b9583.026Poecilia_mexicana
ENSPNAG00000002889rbfox3a10086.207ENSPREG00000012886rbfox3b10083.467Poecilia_reticulata
ENSPNAG00000002889rbfox3a8970.145ENSPPYG00000008704RBFOX310069.855Pongo_abelii
ENSPNAG00000002889rbfox3a8469.014ENSPCAG00000001401RBFOX39671.347Procavia_capensis
ENSPNAG00000002889rbfox3a9862.798ENSPCOG00000012689RBFOX39769.714Propithecus_coquereli
ENSPNAG00000002889rbfox3a9348.433ENSPVAG00000015243RBFOX39662.286Pteropus_vampyrus
ENSPNAG00000002889rbfox3a10079.032ENSPNYG00000009079-9777.067Pundamilia_nyererei
ENSPNAG00000002889rbfox3a10075.000ENSPNYG00000010414rbfox3b75100.000Pundamilia_nyererei
ENSPNAG00000002889rbfox3a8180.592ENSRNOG00000003386Rbfox39580.592Rattus_norvegicus
ENSPNAG00000002889rbfox3a9881.096ENSRBIG00000040449RBFOX310078.904Rhinopithecus_bieti
ENSPNAG00000002889rbfox3a8182.838ENSRROG00000000766RBFOX39580.528Rhinopithecus_roxellana
ENSPNAG00000002889rbfox3a8182.508ENSSBOG00000031591RBFOX39580.198Saimiri_boliviensis_boliviensis
ENSPNAG00000002889rbfox3a8974.033ENSSHAG00000016076RBFOX39577.860Sarcophilus_harrisii
ENSPNAG00000002889rbfox3a10091.789ENSSFOG00015023260rbfox3a10091.789Scleropages_formosus
ENSPNAG00000002889rbfox3a9869.730ENSSFOG00015004716RBFOX310070.000Scleropages_formosus
ENSPNAG00000002889rbfox3a10082.443ENSSMAG00000012618rbfox3b8780.916Scophthalmus_maximus
ENSPNAG00000002889rbfox3a10083.065ENSSMAG00000019052-10082.796Scophthalmus_maximus
ENSPNAG00000002889rbfox3a8485.017ENSSDUG00000023183rbfox3b9583.026Seriola_dumerili
ENSPNAG00000002889rbfox3a10079.570ENSSDUG00000015801-9978.989Seriola_dumerili
ENSPNAG00000002889rbfox3a10082.796ENSSLDG00000016098-9982.447Seriola_lalandi_dorsalis
ENSPNAG00000002889rbfox3a10085.484ENSSLDG00000000149rbfox3b10083.820Seriola_lalandi_dorsalis
ENSPNAG00000002889rbfox3a9879.341ENSSPUG00000011733RBFOX310078.443Sphenodon_punctatus
ENSPNAG00000002889rbfox3a7479.636ENSSPAG00000004898-7579.297Stegastes_partitus
ENSPNAG00000002889rbfox3a10077.419ENSSPAG00000017571rbfox3b10075.467Stegastes_partitus
ENSPNAG00000002889rbfox3a7487.500ENSSSCG00000039498RBFOX310075.375Sus_scrofa
ENSPNAG00000002889rbfox3a8981.818ENSTRUG00000004894rbfox3b9781.534Takifugu_rubripes
ENSPNAG00000002889rbfox3a9076.776ENSTNIG00000011278rbfox3b9971.891Tetraodon_nigroviridis
ENSPNAG00000002889rbfox3a6056.318ENSTBEG00000004296-7455.957Tupaia_belangeri
ENSPNAG00000002889rbfox3a9353.561ENSTTRG00000003676RBFOX39663.429Tursiops_truncatus
ENSPNAG00000002889rbfox3a8183.168ENSUAMG00000004668RBFOX39580.858Ursus_americanus
ENSPNAG00000002889rbfox3a9877.480ENSVVUG00000017864RBFOX39580.198Vulpes_vulpes
ENSPNAG00000002889rbfox3a8965.537ENSXETG00000020236rbfox39861.168Xenopus_tropicalis
ENSPNAG00000002889rbfox3a9784.741ENSXCOG00000018262rbfox3b10084.196Xiphophorus_couchianus
ENSPNAG00000002889rbfox3a10086.010ENSXMAG00000012939rbfox3b10084.197Xiphophorus_maculatus

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