EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPNAG00000002895 (Gene tree)
Gene ID: 108422280
Gene Symbol: lrpprc
Alias: fc13c04|im:7150924|im:7151572|wu:fc13c04|wu:fj38h02
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 68952 bases
Position: chrKV575301.1:2141188-2210139
Accession: 108422280
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000008050	PPR	PF01535.20	2.3e-31	1	4
ENSPNAP00000008050	PPR	PF01535.20	2.3e-31	2	4
ENSPNAP00000008050	PPR	PF01535.20	2.3e-31	3	4
ENSPNAP00000008050	PPR	PF01535.20	2.3e-31	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000000795	-	5558	XM_017690582	ENSPNAP00000008050	1429 (aa)	XP_017546071	UPI0008143389

Gene Model

Click here to download ENSPNAG00000002895's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000002895's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000002895	lrpprc	99	64.566	ENSAPOG00000016610	lrpprc	99	64.566	Acanthochromis_polyacanthus
ENSPNAG00000002895	lrpprc	95	53.623	ENSAMEG00000005852	LRPPRC	99	53.623	Ailuropoda_melanoleuca
ENSPNAG00000002895	lrpprc	99	62.177	ENSACIG00000009604	lrpprc	99	62.177	Amphilophus_citrinellus
ENSPNAG00000002895	lrpprc	99	65.436	ENSAOCG00000005886	lrpprc	99	65.436	Amphiprion_ocellaris
ENSPNAG00000002895	lrpprc	98	68.173	ENSAPEG00000002937	lrpprc	99	68.173	Amphiprion_percula
ENSPNAG00000002895	lrpprc	99	53.749	ENSATEG00000010555	lrpprc	99	64.615	Anabas_testudineus
ENSPNAG00000002895	lrpprc	95	59.501	ENSACAG00000029278	LRPPRC	99	57.932	Anolis_carolinensis
ENSPNAG00000002895	lrpprc	99	53.319	ENSANAG00000027440	LRPPRC	98	57.090	Aotus_nancymaae
ENSPNAG00000002895	lrpprc	97	62.446	ENSACLG00000023712	lrpprc	92	69.556	Astatotilapia_calliptera
ENSPNAG00000002895	lrpprc	97	53.569	ENSCJAG00000000794	LRPPRC	98	56.538	Callithrix_jacchus
ENSPNAG00000002895	lrpprc	97	54.578	ENSCHIG00000020173	LRPPRC	99	54.932	Capra_hircus
ENSPNAG00000002895	lrpprc	95	42.082	ENSCAPG00000013631	LRPPRC	99	42.269	Cavia_aperea
ENSPNAG00000002895	lrpprc	86	52.389	ENSCPOG00000000204	LRPPRC	100	52.389	Cavia_porcellus
ENSPNAG00000002895	lrpprc	99	53.203	ENSCCAG00000031900	LRPPRC	98	56.906	Cebus_capucinus
ENSPNAG00000002895	lrpprc	97	53.136	ENSCATG00000014187	LRPPRC	98	56.250	Cercocebus_atys
ENSPNAG00000002895	lrpprc	99	52.401	ENSCLAG00000005203	LRPPRC	99	52.401	Chinchilla_lanigera
ENSPNAG00000002895	lrpprc	97	53.208	ENSCSAG00000013233	LRPPRC	97	53.353	Chlorocebus_sabaeus
ENSPNAG00000002895	lrpprc	83	52.935	ENSCHOG00000003631	LRPPRC	84	52.935	Choloepus_hoffmanni
ENSPNAG00000002895	lrpprc	95	51.426	ENSCANG00000034961	LRPPRC	99	59.928	Colobus_angolensis_palliatus
ENSPNAG00000002895	lrpprc	99	53.073	ENSCGRG00001016261	Lrpprc	100	53.073	Cricetulus_griseus_chok1gshd
ENSPNAG00000002895	lrpprc	99	53.073	ENSCGRG00000004072	Lrpprc	100	53.073	Cricetulus_griseus_crigri
ENSPNAG00000002895	lrpprc	99	48.999	ENSCSEG00000003850	lrpprc	96	54.951	Cynoglossus_semilaevis
ENSPNAG00000002895	lrpprc	99	65.919	ENSCVAG00000012967	lrpprc	99	65.919	Cyprinodon_variegatus
ENSPNAG00000002895	lrpprc	99	65.160	ENSDARG00000043970	lrpprc	98	65.160	Danio_rerio
ENSPNAG00000002895	lrpprc	99	53.431	ENSDNOG00000012594	-	99	53.711	Dasypus_novemcinctus
ENSPNAG00000002895	lrpprc	79	41.850	ENSDNOG00000032336	-	97	41.850	Dasypus_novemcinctus
ENSPNAG00000002895	lrpprc	96	54.717	ENSDORG00000012233	Lrpprc	97	54.717	Dipodomys_ordii
ENSPNAG00000002895	lrpprc	95	55.036	ENSETEG00000006657	LRPPRC	99	53.771	Echinops_telfairi
ENSPNAG00000002895	lrpprc	82	44.924	ENSEEUG00000012340	LRPPRC	90	44.924	Erinaceus_europaeus
ENSPNAG00000002895	lrpprc	96	61.152	ENSELUG00000012803	lrpprc	99	61.079	Esox_lucius
ENSPNAG00000002895	lrpprc	99	54.228	ENSFCAG00000013468	LRPPRC	99	54.260	Felis_catus
ENSPNAG00000002895	lrpprc	95	51.506	ENSFALG00000012738	LRPPRC	99	51.506	Ficedula_albicollis
ENSPNAG00000002895	lrpprc	99	51.566	ENSFDAG00000015328	LRPPRC	100	51.566	Fukomys_damarensis
ENSPNAG00000002895	lrpprc	99	63.484	ENSFHEG00000019604	lrpprc	99	63.484	Fundulus_heteroclitus
ENSPNAG00000002895	lrpprc	100	59.707	ENSGMOG00000008337	lrpprc	99	59.707	Gadus_morhua
ENSPNAG00000002895	lrpprc	99	64.336	ENSGAFG00000001455	lrpprc	99	64.336	Gambusia_affinis
ENSPNAG00000002895	lrpprc	99	63.066	ENSGACG00000010679	lrpprc	99	65.328	Gasterosteus_aculeatus
ENSPNAG00000002895	lrpprc	99	66.295	ENSHBUG00000000393	lrpprc	98	66.295	Haplochromis_burtoni
ENSPNAG00000002895	lrpprc	99	51.710	ENSHGLG00000006123	LRPPRC	100	51.710	Heterocephalus_glaber_female
ENSPNAG00000002895	lrpprc	59	50.524	ENSHGLG00100005960	-	100	50.524	Heterocephalus_glaber_male
ENSPNAG00000002895	lrpprc	97	63.837	ENSHCOG00000002107	lrpprc	100	63.837	Hippocampus_comes
ENSPNAG00000002895	lrpprc	100	73.509	ENSIPUG00000009406	lrpprc	99	73.509	Ictalurus_punctatus
ENSPNAG00000002895	lrpprc	96	54.898	ENSSTOG00000011185	LRPPRC	100	53.626	Ictidomys_tridecemlineatus
ENSPNAG00000002895	lrpprc	95	54.240	ENSJJAG00000020475	Lrpprc	97	54.240	Jaculus_jaculus
ENSPNAG00000002895	lrpprc	98	57.315	ENSKMAG00000003287	lrpprc	84	57.315	Kryptolebias_marmoratus
ENSPNAG00000002895	lrpprc	99	58.547	ENSLBEG00000023225	lrpprc	96	66.862	Labrus_bergylta
ENSPNAG00000002895	lrpprc	99	61.232	ENSLACG00000014030	LRPPRC	99	61.232	Latimeria_chalumnae
ENSPNAG00000002895	lrpprc	99	66.223	ENSLOCG00000016390	lrpprc	97	66.223	Lepisosteus_oculatus
ENSPNAG00000002895	lrpprc	95	52.343	ENSLAFG00000008614	LRPPRC	99	51.225	Loxodonta_africana
ENSPNAG00000002895	lrpprc	97	53.132	ENSMFAG00000041560	LRPPRC	99	59.567	Macaca_fascicularis
ENSPNAG00000002895	lrpprc	97	52.412	ENSMMUG00000019841	LRPPRC	99	54.245	Macaca_mulatta
ENSPNAG00000002895	lrpprc	97	52.988	ENSMNEG00000031613	LRPPRC	98	56.066	Macaca_nemestrina
ENSPNAG00000002895	lrpprc	98	59.459	ENSMAMG00000021835	lrpprc	98	59.618	Mastacembelus_armatus
ENSPNAG00000002895	lrpprc	99	66.295	ENSMZEG00005027379	lrpprc	99	66.295	Maylandia_zebra
ENSPNAG00000002895	lrpprc	99	52.444	ENSMAUG00000012118	Lrpprc	100	52.514	Mesocricetus_auratus
ENSPNAG00000002895	lrpprc	100	53.556	ENSMICG00000010486	LRPPRC	98	56.562	Microcebus_murinus
ENSPNAG00000002895	lrpprc	99	53.544	ENSMOCG00000006048	Lrpprc	99	53.544	Microtus_ochrogaster
ENSPNAG00000002895	lrpprc	99	62.684	ENSMMOG00000007830	lrpprc	94	68.226	Mola_mola
ENSPNAG00000002895	lrpprc	95	54.843	ENSMODG00000000648	LRPPRC	99	54.843	Monodelphis_domestica
ENSPNAG00000002895	lrpprc	99	62.849	ENSMALG00000001271	lrpprc	99	62.989	Monopterus_albus
ENSPNAG00000002895	lrpprc	98	55.537	ENSMPUG00000011800	LRPPRC	99	55.574	Mustela_putorius_furo
ENSPNAG00000002895	lrpprc	99	52.994	ENSMLUG00000010575	LRPPRC	99	52.994	Myotis_lucifugus
ENSPNAG00000002895	lrpprc	99	52.470	ENSNGAG00000013069	Lrpprc	100	52.474	Nannospalax_galili
ENSPNAG00000002895	lrpprc	94	61.584	ENSNBRG00000013202	lrpprc	92	69.492	Neolamprologus_brichardi
ENSPNAG00000002895	lrpprc	99	51.844	ENSNLEG00000016782	LRPPRC	98	56.618	Nomascus_leucogenys
ENSPNAG00000002895	lrpprc	90	48.581	ENSOPRG00000016774	LRPPRC	90	48.253	Ochotona_princeps
ENSPNAG00000002895	lrpprc	99	52.739	ENSODEG00000011211	LRPPRC	99	52.838	Octodon_degus
ENSPNAG00000002895	lrpprc	99	66.504	ENSONIG00000000917	lrpprc	99	66.011	Oreochromis_niloticus
ENSPNAG00000002895	lrpprc	74	49.747	ENSOANG00000014670	-	100	50.512	Ornithorhynchus_anatinus
ENSPNAG00000002895	lrpprc	99	54.444	ENSOCUG00000015046	LRPPRC	95	54.514	Oryctolagus_cuniculus
ENSPNAG00000002895	lrpprc	99	61.738	ENSORLG00000004605	lrpprc	96	61.421	Oryzias_latipes
ENSPNAG00000002895	lrpprc	91	65.264	ENSORLG00020012536	lrpprc	99	64.697	Oryzias_latipes_hni
ENSPNAG00000002895	lrpprc	94	66.214	ENSORLG00015018270	lrpprc	98	66.214	Oryzias_latipes_hsok
ENSPNAG00000002895	lrpprc	99	53.566	ENSOGAG00000012798	LRPPRC	99	53.566	Otolemur_garnettii
ENSPNAG00000002895	lrpprc	95	55.238	ENSOARG00000006522	LRPPRC	99	54.158	Ovis_aries
ENSPNAG00000002895	lrpprc	99	51.182	ENSPPAG00000040876	LRPPRC	98	56.611	Pan_paniscus
ENSPNAG00000002895	lrpprc	99	54.170	ENSPPRG00000006578	LRPPRC	99	54.120	Panthera_pardus
ENSPNAG00000002895	lrpprc	95	55.466	ENSPTIG00000000933	LRPPRC	96	55.466	Panthera_tigris_altaica
ENSPNAG00000002895	lrpprc	99	52.201	ENSPTRG00000011880	LRPPRC	98	56.273	Pan_troglodytes
ENSPNAG00000002895	lrpprc	97	52.677	ENSPANG00000020731	LRPPRC	98	56.066	Papio_anubis
ENSPNAG00000002895	lrpprc	95	49.927	ENSPKIG00000022232	lrpprc	96	63.656	Paramormyrops_kingsleyae
ENSPNAG00000002895	lrpprc	61	58.495	ENSPSIG00000006830	-	99	58.495	Pelodiscus_sinensis
ENSPNAG00000002895	lrpprc	67	58.848	ENSPMGG00000016597	lrpprc	96	58.639	Periophthalmus_magnuspinnatus
ENSPNAG00000002895	lrpprc	93	45.618	ENSPMAG00000002147	lrpprc	99	45.618	Petromyzon_marinus
ENSPNAG00000002895	lrpprc	99	64.165	ENSPFOG00000011227	lrpprc	99	64.165	Poecilia_formosa
ENSPNAG00000002895	lrpprc	99	63.955	ENSPLAG00000004018	lrpprc	99	63.955	Poecilia_latipinna
ENSPNAG00000002895	lrpprc	99	64.025	ENSPMEG00000016425	lrpprc	99	64.025	Poecilia_mexicana
ENSPNAG00000002895	lrpprc	99	63.836	ENSPREG00000003662	lrpprc	99	63.821	Poecilia_reticulata
ENSPNAG00000002895	lrpprc	57	50.426	ENSPPYG00000029532	-	99	50.426	Pongo_abelii
ENSPNAG00000002895	lrpprc	82	53.401	ENSPCAG00000001430	LRPPRC	84	53.401	Procavia_capensis
ENSPNAG00000002895	lrpprc	99	51.122	ENSPVAG00000002007	LRPPRC	99	51.122	Pteropus_vampyrus
ENSPNAG00000002895	lrpprc	99	59.362	ENSPNYG00000000756	lrpprc	99	59.085	Pundamilia_nyererei
ENSPNAG00000002895	lrpprc	95	53.987	ENSRNOG00000005877	Lrpprc	99	52.912	Rattus_norvegicus
ENSPNAG00000002895	lrpprc	97	52.152	ENSRBIG00000031552	LRPPRC	99	51.385	Rhinopithecus_bieti
ENSPNAG00000002895	lrpprc	99	53.389	ENSSBOG00000011807	LRPPRC	98	57.435	Saimiri_boliviensis_boliviensis
ENSPNAG00000002895	lrpprc	95	53.642	ENSSHAG00000018725	LRPPRC	99	53.642	Sarcophilus_harrisii
ENSPNAG00000002895	lrpprc	99	58.844	ENSSFOG00015001042	lrpprc	99	58.844	Scleropages_formosus
ENSPNAG00000002895	lrpprc	99	64.677	ENSSDUG00000019062	lrpprc	99	64.677	Seriola_dumerili
ENSPNAG00000002895	lrpprc	99	59.727	ENSSLDG00000023028	lrpprc	99	59.866	Seriola_lalandi_dorsalis
ENSPNAG00000002895	lrpprc	86	51.009	ENSSARG00000000426	LRPPRC	99	51.292	Sorex_araneus
ENSPNAG00000002895	lrpprc	99	59.545	ENSSPAG00000000162	lrpprc	99	59.959	Stegastes_partitus
ENSPNAG00000002895	lrpprc	99	53.884	ENSSSCG00000008452	LRPPRC	99	53.884	Sus_scrofa
ENSPNAG00000002895	lrpprc	93	50.969	ENSTGUG00000003759	LRPPRC	99	50.969	Taeniopygia_guttata
ENSPNAG00000002895	lrpprc	99	62.198	ENSTRUG00000008409	lrpprc	99	62.198	Takifugu_rubripes
ENSPNAG00000002895	lrpprc	99	62.781	ENSTNIG00000007470	lrpprc	99	64.397	Tetraodon_nigroviridis
ENSPNAG00000002895	lrpprc	95	53.226	ENSTTRG00000006403	LRPPRC	99	52.059	Tursiops_truncatus
ENSPNAG00000002895	lrpprc	96	51.064	ENSVPAG00000008993	LRPPRC	99	51.064	Vicugna_pacos
ENSPNAG00000002895	lrpprc	95	60.382	ENSXETG00000009296	lrpprc	99	59.081	Xenopus_tropicalis
ENSPNAG00000002895	lrpprc	99	59.324	ENSXCOG00000013343	lrpprc	95	62.109	Xiphophorus_couchianus
ENSPNAG00000002895	lrpprc	99	63.751	ENSXMAG00000018108	lrpprc	99	63.751	Xiphophorus_maculatus