EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000002955 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 4846 bases
Position: chrKV579185.1:297-5142
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000008187	zf-CCHC	PF00098.23	6.7e-05	1	2
ENSPNAP00000008187	zf-CCHC	PF00098.23	6.7e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000000555	-	423	-	ENSPNAP00000008187	141 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000002955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000002955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000002955	-	75	96.226	ENSPNAG00000007153	-	55	96.226
ENSPNAG00000002955	-	71	97.000	ENSPNAG00000004865	-	52	97.000
ENSPNAG00000002955	-	68	76.042	ENSPNAG00000025019	-	69	54.135

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000002955	-	75	38.679	ENSACLG00000011316	-	51	38.679	Astatotilapia_calliptera
ENSPNAG00000002955	-	67	41.489	ENSACLG00000019919	-	60	41.489	Astatotilapia_calliptera
ENSPNAG00000002955	-	62	53.409	ENSGACG00000000773	-	51	53.409	Gasterosteus_aculeatus
ENSPNAG00000002955	-	62	54.545	ENSGACG00000018075	-	52	54.545	Gasterosteus_aculeatus
ENSPNAG00000002955	-	75	49.296	ENSLOCG00000008338	-	60	49.296	Lepisosteus_oculatus
ENSPNAG00000002955	-	69	41.414	ENSLOCG00000017824	-	71	41.414	Lepisosteus_oculatus
ENSPNAG00000002955	-	62	39.773	ENSLOCG00000017305	-	60	39.773	Lepisosteus_oculatus
ENSPNAG00000002955	-	64	45.556	ENSLOCG00000017302	-	52	45.556	Lepisosteus_oculatus
ENSPNAG00000002955	-	61	43.023	ENSLOCG00000017641	-	60	43.023	Lepisosteus_oculatus
ENSPNAG00000002955	-	69	41.414	ENSLOCG00000018355	-	58	41.414	Lepisosteus_oculatus
ENSPNAG00000002955	-	62	50.847	ENSLOCG00000000361	-	52	50.847	Lepisosteus_oculatus
ENSPNAG00000002955	-	68	43.750	ENSLOCG00000017530	-	56	43.750	Lepisosteus_oculatus
ENSPNAG00000002955	-	85	48.214	ENSLOCG00000000320	-	52	48.214	Lepisosteus_oculatus
ENSPNAG00000002955	-	64	46.667	ENSLOCG00000017327	-	62	46.667	Lepisosteus_oculatus
ENSPNAG00000002955	-	63	44.944	ENSLOCG00000017328	-	52	44.944	Lepisosteus_oculatus
ENSPNAG00000002955	-	71	38.235	ENSLOCG00000018075	-	52	38.235	Lepisosteus_oculatus
ENSPNAG00000002955	-	65	46.154	ENSLOCG00000017670	-	50	46.154	Lepisosteus_oculatus
ENSPNAG00000002955	-	60	44.186	ENSLOCG00000010606	-	56	44.186	Lepisosteus_oculatus
ENSPNAG00000002955	-	71	45.902	ENSLOCG00000000297	-	53	45.902	Lepisosteus_oculatus
ENSPNAG00000002955	-	65	46.154	ENSLOCG00000017639	-	50	46.154	Lepisosteus_oculatus
ENSPNAG00000002955	-	66	42.105	ENSLOCG00000002624	-	54	42.105	Lepisosteus_oculatus
ENSPNAG00000002955	-	67	42.553	ENSLOCG00000017503	-	52	42.553	Lepisosteus_oculatus
ENSPNAG00000002955	-	62	43.678	ENSLOCG00000006695	-	50	43.678	Lepisosteus_oculatus
ENSPNAG00000002955	-	66	43.011	ENSLOCG00000017666	-	91	43.011	Lepisosteus_oculatus
ENSPNAG00000002955	-	65	44.643	ENSLOCG00000012680	-	50	44.643	Lepisosteus_oculatus
ENSPNAG00000002955	-	65	40.426	ENSLOCG00000017501	-	57	40.426	Lepisosteus_oculatus
ENSPNAG00000002955	-	65	39.560	ENSLOCG00000017694	-	52	39.560	Lepisosteus_oculatus
ENSPNAG00000002955	-	67	43.158	ENSLOCG00000017303	-	50	43.158	Lepisosteus_oculatus
ENSPNAG00000002955	-	75	38.679	ENSMZEG00005028130	-	50	38.679	Maylandia_zebra
ENSPNAG00000002955	-	74	43.636	ENSMZEG00005025873	-	86	43.636	Maylandia_zebra
ENSPNAG00000002955	-	57	44.737	ENSMZEG00005028547	-	70	44.737	Maylandia_zebra
ENSPNAG00000002955	-	74	38.679	ENSNBRG00000024092	-	53	38.679	Neolamprologus_brichardi
ENSPNAG00000002955	-	67	60.638	ENSPKIG00000015924	-	62	60.638	Paramormyrops_kingsleyae
ENSPNAG00000002955	-	66	34.409	ENSPNYG00000015964	-	61	34.409	Pundamilia_nyererei
ENSPNAG00000002955	-	62	33.333	ENSPNYG00000002656	-	55	30.303	Pundamilia_nyererei
ENSPNAG00000002955	-	80	47.788	ENSSFOG00015016511	-	80	47.788	Scleropages_formosus
ENSPNAG00000002955	-	71	49.000	ENSSFOG00015012405	-	53	49.000	Scleropages_formosus
ENSPNAG00000002955	-	72	35.849	ENSXETG00000032297	-	54	35.849	Xenopus_tropicalis
ENSPNAG00000002955	-	72	35.922	ENSXETG00000031282	-	53	35.922	Xenopus_tropicalis
ENSPNAG00000002955	-	79	44.828	ENSXETG00000034305	-	71	44.828	Xenopus_tropicalis
ENSPNAG00000002955	-	74	34.286	ENSXETG00000032402	-	54	34.286	Xenopus_tropicalis
ENSPNAG00000002955	-	79	36.975	ENSXETG00000030090	-	61	36.975	Xenopus_tropicalis
ENSPNAG00000002955	-	50	45.714	ENSXMAG00000024371	-	63	45.714	Xiphophorus_maculatus