EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000003267 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 2019 bases
Position: chrKV576137.1:194381-196399
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000009289	RVT_1	PF00078.27	1.1e-11	1	1
ENSPNAP00000009289	zf-CCHC	PF00098.23	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000015586	-	2019	-	ENSPNAP00000009289	672 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000003267's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000003267's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000003267	-	100	69.129	ENSPNAG00000020389	-	87	69.129
ENSPNAG00000003267	-	84	55.088	ENSPNAG00000014076	-	89	55.088

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000003267	-	52	34.190	ENSAPOG00000012172	-	68	33.763	Acanthochromis_polyacanthus
ENSPNAG00000003267	-	77	46.349	ENSACAG00000029367	-	64	46.349	Anolis_carolinensis
ENSPNAG00000003267	-	91	50.709	ENSAMXG00000038544	-	94	50.709	Astyanax_mexicanus
ENSPNAG00000003267	-	90	52.488	ENSAMXG00000043875	-	90	52.488	Astyanax_mexicanus
ENSPNAG00000003267	-	99	51.565	ENSAMXG00000036897	-	91	51.267	Astyanax_mexicanus
ENSPNAG00000003267	-	92	50.858	ENSAMXG00000030934	-	97	50.546	Astyanax_mexicanus
ENSPNAG00000003267	-	89	53.300	ENSAMXG00000029689	-	81	53.300	Astyanax_mexicanus
ENSPNAG00000003267	-	98	51.395	ENSAMXG00000033831	-	86	51.101	Astyanax_mexicanus
ENSPNAG00000003267	-	88	48.567	ENSIPUG00000023478	-	94	47.954	Ictalurus_punctatus
ENSPNAG00000003267	-	99	44.030	ENSIPUG00000020583	-	86	47.395	Ictalurus_punctatus
ENSPNAG00000003267	-	99	41.106	ENSIPUG00000000467	-	81	44.351	Ictalurus_punctatus
ENSPNAG00000003267	-	97	44.275	ENSIPUG00000009957	-	90	47.856	Ictalurus_punctatus
ENSPNAG00000003267	-	89	40.000	ENSKMAG00000021728	-	92	40.000	Kryptolebias_marmoratus
ENSPNAG00000003267	-	81	32.275	ENSORLG00000004601	-	66	32.762	Oryzias_latipes
ENSPNAG00000003267	-	97	36.212	ENSORLG00000027546	-	87	37.540	Oryzias_latipes
ENSPNAG00000003267	-	90	37.700	ENSORLG00000025074	-	88	37.724	Oryzias_latipes
ENSPNAG00000003267	-	98	36.618	ENSORLG00020008270	-	86	38.689	Oryzias_latipes_hni
ENSPNAG00000003267	-	99	37.243	ENSORLG00020019360	-	87	39.379	Oryzias_latipes_hni
ENSPNAG00000003267	-	90	38.560	ENSORLG00020018037	-	91	38.560	Oryzias_latipes_hni
ENSPNAG00000003267	-	86	40.741	ENSPKIG00000000452	-	89	41.077	Paramormyrops_kingsleyae
ENSPNAG00000003267	-	86	40.240	ENSPKIG00000021000	-	94	40.582	Paramormyrops_kingsleyae