EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000003444 (Gene tree)
Gene ID: 108437922
Gene Symbol: setdb1a
Alias: fc07d03|si:ch211-81a5.6|wu:fc07d03
Full Name: histone-lysine N-methyltransferase SETDB1-A-like
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Plus strand
Length: 22785 bases
Position: chrKV575537.1:1041869-1064653
Accession: 108437922
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000011172	MBD	PF01429.19	8.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000018065	-	5336	XM_017715357	ENSPNAP00000011172	1480 (aa)	XP_017570846	UPI0008146CFD

Gene Model

Click here to download ENSPNAG00000003444's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000003444's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000003444	setdb1a	66	82.474	ENSPNAG00000021617	setdb1b	70	62.937

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000003444	setdb1a	63	63.014	ENSAMEG00000001160	SETDB1	75	63.014	Ailuropoda_melanoleuca
ENSPNAG00000003444	setdb1a	51	46.244	ENSACIG00000007359	setdb1b	90	43.333	Amphilophus_citrinellus
ENSPNAG00000003444	setdb1a	53	83.505	ENSAOCG00000005586	setdb1b	96	44.400	Amphiprion_ocellaris
ENSPNAG00000003444	setdb1a	61	64.336	ENSAPLG00000013908	SETDB1	61	64.336	Anas_platyrhynchos
ENSPNAG00000003444	setdb1a	63	63.014	ENSANAG00000001819	SETDB1	75	63.014	Aotus_nancymaae
ENSPNAG00000003444	setdb1a	99	55.041	ENSAMXG00000010030	setdb1a	84	68.994	Astyanax_mexicanus
ENSPNAG00000003444	setdb1a	63	58.228	ENSBTAG00000000098	SETDB1	77	58.228	Bos_taurus
ENSPNAG00000003444	setdb1a	63	63.014	ENSCAFG00020013596	SETDB1	76	63.014	Canis_lupus_dingo
ENSPNAG00000003444	setdb1a	63	63.014	ENSCHIG00000010698	SETDB1	75	58.228	Capra_hircus
ENSPNAG00000003444	setdb1a	53	43.415	ENSTSYG00000012646	SETDB1	78	44.189	Carlito_syrichta
ENSPNAG00000003444	setdb1a	51	63.014	ENSCATG00000044888	SETDB1	58	63.014	Cercocebus_atys
ENSPNAG00000003444	setdb1a	57	59.494	ENSCLAG00000000242	SETDB1	75	58.228	Chinchilla_lanigera
ENSPNAG00000003444	setdb1a	61	67.164	ENSCHOG00000004013	SETDB1	71	67.164	Choloepus_hoffmanni
ENSPNAG00000003444	setdb1a	61	65.035	ENSCPBG00000008716	SETDB1	75	63.087	Chrysemys_picta_bellii
ENSPNAG00000003444	setdb1a	52	59.494	ENSCANG00000036388	SETDB1	64	59.494	Colobus_angolensis_palliatus
ENSPNAG00000003444	setdb1a	62	63.014	ENSCGRG00001010822	Setdb1	74	63.014	Cricetulus_griseus_chok1gshd
ENSPNAG00000003444	setdb1a	62	63.014	ENSCGRG00000005953	Setdb1	74	63.014	Cricetulus_griseus_crigri
ENSPNAG00000003444	setdb1a	60	83.505	ENSCSEG00000002988	setdb1b	97	42.983	Cynoglossus_semilaevis
ENSPNAG00000003444	setdb1a	72	74.219	ENSDARG00000041243	setdb1a	58	74.219	Danio_rerio
ENSPNAG00000003444	setdb1a	63	82.474	ENSDARG00000099021	setdb1b	95	43.145	Danio_rerio
ENSPNAG00000003444	setdb1a	63	63.014	ENSDORG00000006830	Setdb1	75	63.014	Dipodomys_ordii
ENSPNAG00000003444	setdb1a	81	51.136	ENSELUG00000006204	-	82	44.776	Esox_lucius
ENSPNAG00000003444	setdb1a	63	60.811	ENSELUG00000013948	setdb1b	82	60.811	Esox_lucius
ENSPNAG00000003444	setdb1a	56	82.474	ENSFHEG00000022195	setdb1b	78	46.753	Fundulus_heteroclitus
ENSPNAG00000003444	setdb1a	62	68.421	ENSGMOG00000005993	setdb1b	80	68.421	Gadus_morhua
ENSPNAG00000003444	setdb1a	61	63.636	ENSGALG00000024051	SETDB1	69	63.636	Gallus_gallus
ENSPNAG00000003444	setdb1a	50	64.789	ENSGACG00000011675	setdb1b	64	64.789	Gasterosteus_aculeatus
ENSPNAG00000003444	setdb1a	61	65.035	ENSGAGG00000005348	SETDB1	75	63.087	Gopherus_agassizii
ENSPNAG00000003444	setdb1a	63	59.494	ENSHGLG00000011098	SETDB1	74	63.014	Heterocephalus_glaber_female
ENSPNAG00000003444	setdb1a	63	59.494	ENSHGLG00100009789	SETDB1	75	63.014	Heterocephalus_glaber_male
ENSPNAG00000003444	setdb1a	67	67.197	ENSIPUG00000007923	setdb1a	87	64.820	Ictalurus_punctatus
ENSPNAG00000003444	setdb1a	71	81.443	ENSIPUG00000004536	setdb1	98	41.634	Ictalurus_punctatus
ENSPNAG00000003444	setdb1a	56	63.014	ENSSTOG00000006770	SETDB1	62	63.014	Ictidomys_tridecemlineatus
ENSPNAG00000003444	setdb1a	56	83.505	ENSKMAG00000001197	setdb1b	83	46.341	Kryptolebias_marmoratus
ENSPNAG00000003444	setdb1a	56	63.889	ENSLACG00000011159	SETDB1	62	62.585	Latimeria_chalumnae
ENSPNAG00000003444	setdb1a	63	58.228	ENSLAFG00000004006	SETDB1	75	58.228	Loxodonta_africana
ENSPNAG00000003444	setdb1a	56	40.000	ENSMGAG00000001018	SETDB1	74	38.667	Meleagris_gallopavo
ENSPNAG00000003444	setdb1a	57	63.699	ENSMAUG00000021391	Setdb1	76	63.699	Mesocricetus_auratus
ENSPNAG00000003444	setdb1a	63	58.228	ENSMICG00000000425	SETDB1	75	58.228	Microcebus_murinus
ENSPNAG00000003444	setdb1a	62	62.774	ENSMODG00000018821	SETDB1	66	64.394	Monodelphis_domestica
ENSPNAG00000003444	setdb1a	54	44.506	ENSMALG00000007801	setdb1b	91	43.383	Monopterus_albus
ENSPNAG00000003444	setdb1a	56	63.014	MGP_CAROLIEiJ_G0025342	Setdb1	62	63.014	Mus_caroli
ENSPNAG00000003444	setdb1a	56	63.014	ENSMUSG00000015697	Setdb1	62	63.014	Mus_musculus
ENSPNAG00000003444	setdb1a	63	59.006	ENSNGAG00000020151	Setdb1	74	59.006	Nannospalax_galili
ENSPNAG00000003444	setdb1a	54	63.014	ENSMEUG00000006544	-	60	63.014	Notamacropus_eugenii
ENSPNAG00000003444	setdb1a	67	63.830	ENSMEUG00000000555	-	81	63.830	Notamacropus_eugenii
ENSPNAG00000003444	setdb1a	63	58.750	ENSONIG00000006454	setdb1b	90	42.392	Oreochromis_niloticus
ENSPNAG00000003444	setdb1a	63	62.069	ENSOCUG00000003642	SETDB1	75	62.069	Oryctolagus_cuniculus
ENSPNAG00000003444	setdb1a	57	82.474	ENSORLG00000010602	setdb1b	76	82.474	Oryzias_latipes
ENSPNAG00000003444	setdb1a	66	82.474	ENSOMEG00000009457	setdb1b	77	82.474	Oryzias_melastigma
ENSPNAG00000003444	setdb1a	56	59.006	ENSOGAG00000010320	SETDB1	65	58.228	Otolemur_garnettii
ENSPNAG00000003444	setdb1a	63	63.014	ENSOARG00000020880	SETDB1	75	58.228	Ovis_aries
ENSPNAG00000003444	setdb1a	53	63.699	ENSPTIG00000014233	SETDB1	74	63.699	Panthera_tigris_altaica
ENSPNAG00000003444	setdb1a	66	58.537	ENSPKIG00000010963	setdb1b	89	58.537	Paramormyrops_kingsleyae
ENSPNAG00000003444	setdb1a	55	63.014	ENSPEMG00000010553	Setdb1	69	63.014	Peromyscus_maniculatus_bairdii
ENSPNAG00000003444	setdb1a	60	62.857	ENSPFOG00000004429	setdb1b	66	63.571	Poecilia_formosa
ENSPNAG00000003444	setdb1a	56	60.131	ENSPFOG00000004623	-	63	60.784	Poecilia_formosa
ENSPNAG00000003444	setdb1a	52	63.014	ENSPPYG00000000887	SETDB1	62	63.014	Pongo_abelii
ENSPNAG00000003444	setdb1a	53	43.305	ENSPCAG00000002527	SETDB1	73	43.972	Procavia_capensis
ENSPNAG00000003444	setdb1a	63	47.468	ENSPVAG00000004355	SETDB1	67	53.571	Pteropus_vampyrus
ENSPNAG00000003444	setdb1a	63	58.750	ENSPNYG00000003997	setdb1b	83	47.604	Pundamilia_nyererei
ENSPNAG00000003444	setdb1a	63	63.014	ENSRNOG00000021143	Setdb1	74	63.014	Rattus_norvegicus
ENSPNAG00000003444	setdb1a	63	63.014	ENSRROG00000032628	SETDB1	74	63.014	Rhinopithecus_roxellana
ENSPNAG00000003444	setdb1a	63	63.014	ENSSHAG00000012701	SETDB1	75	63.014	Sarcophilus_harrisii
ENSPNAG00000003444	setdb1a	64	57.692	ENSSFOG00015022183	setdb1	53	58.228	Scleropages_formosus
ENSPNAG00000003444	setdb1a	61	66.917	ENSSPUG00000002969	SETDB1	73	66.917	Sphenodon_punctatus
ENSPNAG00000003444	setdb1a	63	63.014	ENSSSCG00000006645	SETDB1	74	63.014	Sus_scrofa
ENSPNAG00000003444	setdb1a	60	82.653	ENSTRUG00000014641	setdb1b	95	42.729	Takifugu_rubripes
ENSPNAG00000003444	setdb1a	58	82.653	ENSTNIG00000008065	setdb1b	78	60.784	Tetraodon_nigroviridis
ENSPNAG00000003444	setdb1a	55	63.014	ENSUAMG00000026724	SETDB1	74	63.014	Ursus_americanus
ENSPNAG00000003444	setdb1a	54	63.014	ENSUMAG00000003141	SETDB1	75	63.014	Ursus_maritimus
ENSPNAG00000003444	setdb1a	63	63.014	ENSVVUG00000011637	SETDB1	74	63.014	Vulpes_vulpes
ENSPNAG00000003444	setdb1a	61	66.429	ENSXETG00000008936	setdb1	64	66.429	Xenopus_tropicalis
ENSPNAG00000003444	setdb1a	61	63.571	ENSXCOG00000019497	setdb1b	73	64.286	Xiphophorus_couchianus
ENSPNAG00000003444	setdb1a	67	82.474	ENSXMAG00000016600	setdb1b	91	41.493	Xiphophorus_maculatus