EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPNAG00000003539 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pygocentrus_nattereri
Status: putative
Strand: Minus strand
Length: 8322 bases
Position: chrKV578116.1:487-8808
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPNAP00000012792	RVT_1	PF00078.27	6e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPNAT00000020183	-	3663	-	ENSPNAP00000012792	1220 (aa)	-	-

Gene Model

Click here to download ENSPNAG00000003539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPNAG00000003539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPNAG00000003539	-	91	73.232	ENSPNAG00000021754	-	92	73.232
ENSPNAG00000003539	-	96	67.179	ENSPNAG00000014625	-	97	67.179
ENSPNAG00000003539	-	82	76.318	ENSPNAG00000017596	-	95	76.318
ENSPNAG00000003539	-	98	71.596	ENSPNAG00000007038	-	99	71.786
ENSPNAG00000003539	-	96	79.184	ENSPNAG00000016635	-	96	79.184

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPNAG00000003539	-	67	36.683	ENSACIG00000012161	-	72	36.683	Amphilophus_citrinellus
ENSPNAG00000003539	-	60	42.159	ENSACIG00000010787	-	73	42.159	Amphilophus_citrinellus
ENSPNAG00000003539	-	67	41.557	ENSACIG00000007038	-	72	41.294	Amphilophus_citrinellus
ENSPNAG00000003539	-	69	40.566	ENSACIG00000013116	-	81	40.566	Amphilophus_citrinellus
ENSPNAG00000003539	-	69	41.420	ENSACIG00000009025	-	93	41.420	Amphilophus_citrinellus
ENSPNAG00000003539	-	90	43.139	ENSAMXG00000042811	-	94	42.694	Astyanax_mexicanus
ENSPNAG00000003539	-	90	40.337	ENSCPBG00000003842	-	84	40.337	Chrysemys_picta_bellii
ENSPNAG00000003539	-	68	38.278	ENSCVAG00000004138	-	78	38.278	Cyprinodon_variegatus
ENSPNAG00000003539	-	71	43.503	ENSELUG00000004597	-	89	43.715	Esox_lucius
ENSPNAG00000003539	-	82	41.141	ENSELUG00000004618	-	86	40.356	Esox_lucius
ENSPNAG00000003539	-	85	33.845	ENSFHEG00000007211	-	93	33.962	Fundulus_heteroclitus
ENSPNAG00000003539	-	71	37.911	ENSFHEG00000022106	-	95	34.054	Fundulus_heteroclitus
ENSPNAG00000003539	-	68	33.617	ENSFHEG00000002865	-	69	33.617	Fundulus_heteroclitus
ENSPNAG00000003539	-	84	37.112	ENSFHEG00000002853	-	94	37.037	Fundulus_heteroclitus
ENSPNAG00000003539	-	50	40.132	ENSGMOG00000005227	-	99	40.132	Gadus_morhua
ENSPNAG00000003539	-	90	35.630	ENSHCOG00000007397	-	93	35.630	Hippocampus_comes
ENSPNAG00000003539	-	90	35.409	ENSHCOG00000000471	-	91	35.409	Hippocampus_comes
ENSPNAG00000003539	-	90	34.577	ENSHCOG00000007389	-	94	34.577	Hippocampus_comes
ENSPNAG00000003539	-	65	37.361	ENSLBEG00000003745	-	86	38.896	Labrus_bergylta
ENSPNAG00000003539	-	63	40.173	ENSLBEG00000004576	-	88	40.173	Labrus_bergylta
ENSPNAG00000003539	-	63	39.957	ENSLBEG00000006732	-	87	38.913	Labrus_bergylta
ENSPNAG00000003539	-	65	35.670	ENSLACG00000006357	-	96	35.670	Latimeria_chalumnae
ENSPNAG00000003539	-	83	40.230	ENSLOCG00000011928	-	97	40.230	Lepisosteus_oculatus
ENSPNAG00000003539	-	90	38.834	ENSLOCG00000017064	-	98	38.834	Lepisosteus_oculatus
ENSPNAG00000003539	-	89	35.027	ENSMAMG00000019985	-	90	35.081	Mastacembelus_armatus
ENSPNAG00000003539	-	69	41.735	ENSONIG00000020875	-	72	41.735	Oreochromis_niloticus
ENSPNAG00000003539	-	67	36.408	ENSOMEG00000015368	-	99	32.104	Oryzias_melastigma
ENSPNAG00000003539	-	67	34.756	ENSPMGG00000017392	-	85	34.756	Periophthalmus_magnuspinnatus
ENSPNAG00000003539	-	52	37.323	ENSPMGG00000001593	-	63	37.323	Periophthalmus_magnuspinnatus
ENSPNAG00000003539	-	69	39.882	ENSPLAG00000023379	-	99	39.882	Poecilia_latipinna
ENSPNAG00000003539	-	68	40.263	ENSPLAG00000022994	-	77	40.263	Poecilia_latipinna
ENSPNAG00000003539	-	67	37.010	ENSPLAG00000011817	-	79	37.164	Poecilia_latipinna
ENSPNAG00000003539	-	66	40.870	ENSPLAG00000011810	-	74	40.870	Poecilia_latipinna
ENSPNAG00000003539	-	69	38.626	ENSPMEG00000003431	-	79	38.717	Poecilia_mexicana
ENSPNAG00000003539	-	78	36.829	ENSPMEG00000008574	-	88	36.829	Poecilia_mexicana
ENSPNAG00000003539	-	77	37.157	ENSPREG00000005456	-	81	37.157	Poecilia_reticulata
ENSPNAG00000003539	-	76	39.588	ENSPREG00000012484	-	81	39.588	Poecilia_reticulata
ENSPNAG00000003539	-	69	37.722	ENSPREG00000005756	-	75	37.722	Poecilia_reticulata
ENSPNAG00000003539	-	68	39.448	ENSXCOG00000008881	-	92	39.448	Xiphophorus_couchianus
ENSPNAG00000003539	-	90	41.802	ENSXCOG00000013093	-	92	41.802	Xiphophorus_couchianus
ENSPNAG00000003539	-	69	38.270	ENSXMAG00000028672	-	75	38.270	Xiphophorus_maculatus